RNA–Protein interactions for RNA: ENSMUST00000107645.1

Slc44a1-202, Transcript of Choline transporter-like protein 1, mousemouse

TSL 5 BASIC

Gene Slc44a1, Length 2,365 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1-202ENSMUST00000107645 Gm35339A0A140LHH9 1649 aa18.44■□□□□ 0.54
Slc44a1-202ENSMUST00000107645 NischQ80TM9 1593 aa18.34■□□□□ 0.53
Slc44a1-202ENSMUST00000107645 Abcc9P70170 1546 aa17.77■□□□□ 0.44
Slc44a1-202ENSMUST00000107645 Abcc8B2RUS7 1588 aa17.67■□□□□ 0.42
Slc44a1-202ENSMUST00000107645 ScribQ80U72 1612 aa16.9■□□□□ 0.3
Slc44a1-202ENSMUST00000107645 Kdm5dQ62240 1548 aa16.38■□□□□ 0.21
Slc44a1-202ENSMUST00000107645 NacadQ5SWP3 1504 aa16.33■□□□□ 0.2
Slc44a1-202ENSMUST00000107645 Dcaf1Q80TR8 1506 aa16.27■□□□□ 0.2
Slc44a1-202ENSMUST00000107645 Rhox8Q6VSS7 320 aa16.14■□□□□ 0.17
Slc44a1-202ENSMUST00000107645 Sycp2Q9CUU3 1500 aa16.02■□□□□ 0.16
Slc44a1-202ENSMUST00000107645 Rb1cc1Q9ESK9 1588 aa16.01■□□□□ 0.15
Slc44a1-202ENSMUST00000107645 BicraF8VPZ9 1578 aa15.81■□□□□ 0.12
Slc44a1-202ENSMUST00000107645 Baz1aO88379 1555 aa15.78■□□□□ 0.12
Slc44a1-202ENSMUST00000107645 Ccdc180J3QNE4 1664 aa15.75■□□□□ 0.11
Slc44a1-202ENSMUST00000107645 Crybg2B7ZCC2 1516 aa15.65■□□□□ 0.1
Slc44a1-202ENSMUST00000107645 Zcchc6Q5BLK4 1491 aaKnown RBP15.53■□□□□ 0.08
Slc44a1-202ENSMUST00000107645 Smarca2Q6DIC0 1577 aa15.37■□□□□ 0.05
Slc44a1-202ENSMUST00000107645 Rtl1Q7M732 1744 aa15.31■□□□□ 0.04
Slc44a1-202ENSMUST00000107645 Cecr2E9Q2Z1 1453 aa15.28■□□□□ 0.04
Slc44a1-202ENSMUST00000107645 Pds5bQ4VA53 1446 aaKnown RBP15.2■□□□□ 0.02
Slc44a1-202ENSMUST00000107645 Atad2bE9Q166 1460 aaKnown RBP15.14■□□□□ 0.01
Slc44a1-202ENSMUST00000107645 Smarca4Q3TKT4 1613 aaKnown RBP15.14■□□□□ 0.01
Slc44a1-202ENSMUST00000107645 Ccdc136Q3TVA9 1136 aa15.11■□□□□ 0.01
Slc44a1-202ENSMUST00000107645 Dnajc5bQ9CQ94 199 aa15.04■□□□□ -0
Slc44a1-202ENSMUST00000107645 Iqgap2Q3UQ44 1575 aa15.03■□□□□ -0
Slc44a1-202ENSMUST00000107645 Thoc2B1AZI6 1594 aaKnown RBP15.01□□□□□ -0.01
Slc44a1-202ENSMUST00000107645 Synj1Q8CHC4 1574 aa14.95□□□□□ -0.02
Slc44a1-202ENSMUST00000107645 CftrP26361 1476 aa14.92□□□□□ -0.02
Slc44a1-202ENSMUST00000107645 Brd4Q9ESU6 1400 aaKnown RBP14.91□□□□□ -0.02
Slc44a1-202ENSMUST00000107645 Ercc6F8VPZ5 1481 aa14.87□□□□□ -0.03
Slc44a1-202ENSMUST00000107645 Frmpd1A2AKB4 1549 aa14.87□□□□□ -0.03
Slc44a1-202ENSMUST00000107645 Wdr62Q3U3T8 1523 aa14.86□□□□□ -0.03
Slc44a1-202ENSMUST00000107645 Cttnbp2B9EJA2 1648 aa14.86□□□□□ -0.03
Slc44a1-202ENSMUST00000107645 Cc2d2aQ8CFW7 1633 aa14.8□□□□□ -0.04
Slc44a1-202ENSMUST00000107645 Trim41Q5NCC3 630 aa14.79□□□□□ -0.04
Slc44a1-202ENSMUST00000107645 Fam135aQ6NS59 1506 aa14.71□□□□□ -0.05
Slc44a1-202ENSMUST00000107645 Unc13aQ4KUS2 1712 aa14.7□□□□□ -0.06
Slc44a1-202ENSMUST00000107645 Phldb1Q6PDH0 1371 aaKnown RBP14.67□□□□□ -0.06
Slc44a1-202ENSMUST00000107645 Esf1Q3V1V3 845 aaKnown RBP14.65□□□□□ -0.06
Slc44a1-202ENSMUST00000107645 Ubl4bQ9CQ84 188 aa14.55□□□□□ -0.08
Slc44a1-202ENSMUST00000107645 Golga3P55937 1487 aa14.52□□□□□ -0.09
Slc44a1-202ENSMUST00000107645 Top2bQ64511 1612 aa14.49□□□□□ -0.09
Slc44a1-202ENSMUST00000107645 Cngb1E1AZ71 1325 aa14.49□□□□□ -0.09
Slc44a1-202ENSMUST00000107645 Rsf1E9PWW9 1441 aaKnown RBP14.42□□□□□ -0.1
Slc44a1-202ENSMUST00000107645 Baz1bQ9Z277 1479 aa14.41□□□□□ -0.1
Slc44a1-202ENSMUST00000107645 Kif15Q6P9L6 1387 aa14.41□□□□□ -0.1
Slc44a1-202ENSMUST00000107645 Lamc3Q9R0B6 1581 aa14.4□□□□□ -0.1
Slc44a1-202ENSMUST00000107645 Mrc2Q64449 1479 aa14.36□□□□□ -0.11
Slc44a1-202ENSMUST00000107645 Cux2P70298 1426 aa14.34□□□□□ -0.11
Slc44a1-202ENSMUST00000107645 TnnQ80Z71 1560 aa14.34□□□□□ -0.11
Slc44a1-202ENSMUST00000107645 Ccdc88bQ4QRL3 1481 aa14.29□□□□□ -0.12
Slc44a1-202ENSMUST00000107645 Fmn1Q05860 1466 aa14.27□□□□□ -0.12
Slc44a1-202ENSMUST00000107645 Chic1Q8CBW7 227 aa14.25□□□□□ -0.13
Slc44a1-202ENSMUST00000107645 Il27Q8K3I6 234 aa14.19□□□□□ -0.14
Slc44a1-202ENSMUST00000107645 Camsap1A2AHC3 1581 aa14.18□□□□□ -0.14
Slc44a1-202ENSMUST00000107645 Kif21aQ9QXL2 1672 aa14.18□□□□□ -0.14
Slc44a1-202ENSMUST00000107645 Npm1Q61937 292 aaKnown RBP14.17□□□□□ -0.14
Slc44a1-202ENSMUST00000107645 HrcG5E8J6 738 aa14.15□□□□□ -0.14
Slc44a1-202ENSMUST00000107645 Ccdc18Q640L5 1455 aa14.14□□□□□ -0.15
Slc44a1-202ENSMUST00000107645 Cep164Q5DU05 1446 aa14.12□□□□□ -0.15
Slc44a1-202ENSMUST00000107645 Top2aQ01320 1528 aaKnown RBP14.09□□□□□ -0.15
Slc44a1-202ENSMUST00000107645 LrpprcQ6PB66 1392 aaKnown RBP14.07□□□□□ -0.16
Slc44a1-202ENSMUST00000107645 Lrriq1Q0P5X1 1673 aa14.07□□□□□ -0.16
Slc44a1-202ENSMUST00000107645 Dhx29Q6PGC1 1365 aaKnown RBP14.06□□□□□ -0.16
Slc44a1-202ENSMUST00000107645 Grin2bQ01097 1482 aa14.02□□□□□ -0.17
Slc44a1-202ENSMUST00000107645 PogzQ8BZH4 1409 aaKnown RBP14.01□□□□□ -0.17
Slc44a1-202ENSMUST00000107645 Plb1Q3TTY0 1478 aa13.97□□□□□ -0.17
Slc44a1-202ENSMUST00000107645 Duox2A2AQ99 1517 aa13.97□□□□□ -0.17
Slc44a1-202ENSMUST00000107645 Urb2E9Q7L1 1524 aaKnown RBP13.97□□□□□ -0.17
Slc44a1-202ENSMUST00000107645 Crocc2F6XLV1 1638 aa13.97□□□□□ -0.17
Slc44a1-202ENSMUST00000107645 PtprkP35822 1457 aa13.95□□□□□ -0.18
Slc44a1-202ENSMUST00000107645 NrkQ9R0G8 1455 aa13.92□□□□□ -0.18
Slc44a1-202ENSMUST00000107645 Gab3Q8BSM5 595 aa13.91□□□□□ -0.18
Slc44a1-202ENSMUST00000107645 Efcab5A0JP43 1406 aa13.89□□□□□ -0.19
Slc44a1-202ENSMUST00000107645 Samd9lQ69Z37 1561 aa13.89□□□□□ -0.19
Slc44a1-202ENSMUST00000107645 Shroom4Q1W617 1475 aa13.88□□□□□ -0.19
Slc44a1-202ENSMUST00000107645 Eif4g3Q80XI3 1579 aaKnown RBP13.83□□□□□ -0.2
Slc44a1-202ENSMUST00000107645 Disp1Q3TDN0 1521 aa13.82□□□□□ -0.2
Slc44a1-202ENSMUST00000107645 Rapgef2Q8CHG7 1496 aa13.81□□□□□ -0.2
Slc44a1-202ENSMUST00000107645 Rad54l2Q99NG0 1466 aa13.81□□□□□ -0.2
Slc44a1-202ENSMUST00000107645 Ift140E9PY46 1464 aa13.8□□□□□ -0.2
Slc44a1-202ENSMUST00000107645 Setd1bQ8CFT2 1985 aa13.78□□□□□ -0.2
Slc44a1-202ENSMUST00000107645 Npm2Q80W85 207 aa13.76□□□□□ -0.21
Slc44a1-202ENSMUST00000107645 Magi3Q9EQJ9 1476 aa13.74□□□□□ -0.21
Slc44a1-202ENSMUST00000107645 Mroh2bQ7M6Y6 1581 aa13.72□□□□□ -0.21
Slc44a1-202ENSMUST00000107645 Nup160Q9Z0W3 1402 aaKnown RBP13.72□□□□□ -0.21
Slc44a1-202ENSMUST00000107645 Arhgap35Q91YM2 1499 aa13.72□□□□□ -0.21
Slc44a1-202ENSMUST00000107645 SynmQ70IV5 1561 aa13.72□□□□□ -0.21
Slc44a1-202ENSMUST00000107645 Eif4g1Q6NZJ6 1600 aaKnown RBP13.71□□□□□ -0.21
Slc44a1-202ENSMUST00000107645 Cep162Q6ZQ06 1403 aa13.7□□□□□ -0.22
Slc44a1-202ENSMUST00000107645 Rusc2Q80U22 1514 aa13.7□□□□□ -0.22
Slc44a1-202ENSMUST00000107645 Grin2aP35436 1464 aa13.7□□□□□ -0.22
Slc44a1-202ENSMUST00000107645 Pla2r1Q62028 1487 aa13.69□□□□□ -0.22
Slc44a1-202ENSMUST00000107645 Zeb1Q64318 1117 aa13.68□□□□□ -0.22
Slc44a1-202ENSMUST00000107645 Pbrm1Q8BSQ9 1634 aaKnown RBP13.67□□□□□ -0.22
Slc44a1-202ENSMUST00000107645 DiexfQ8BTT6 772 aaKnown RBP13.66□□□□□ -0.22
Slc44a1-202ENSMUST00000107645 Cc2d2bA0A286YDU8 1405 aa13.63□□□□□ -0.23
Slc44a1-202ENSMUST00000107645 Map3k1P53349 1493 aa13.62□□□□□ -0.23
Slc44a1-202ENSMUST00000107645 Myt1lP97500 1187 aa13.61□□□□□ -0.23
Slc44a1-202ENSMUST00000107645 Gpatch8A2A6A1 1505 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 251 ms