RNA–Protein interactions for RNA: ENSMUST00000107170.2

Setdb1-202, Transcript of Histone-lysine N-methyltransferase SETDB1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Setdb1, Length 4,622 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1-202ENSMUST00000107170 Rpgrip1Q9EPQ2 1331 aa19.49■□□□□ 0.71
Setdb1-202ENSMUST00000107170 Rhox8Q6VSS7 320 aa19.15■□□□□ 0.66
Setdb1-202ENSMUST00000107170 Las1lA2BE28 776 aaKnown RBP18.81■□□□□ 0.6
Setdb1-202ENSMUST00000107170 Ehmt2Q9Z148 1263 aaKnown RBP18.5■□□□□ 0.55
Setdb1-202ENSMUST00000107170 NischQ80TM9 1593 aa18.38■□□□□ 0.53
Setdb1-202ENSMUST00000107170 Pcgf6Q99NA9 353 aa18.23■□□□□ 0.51
Setdb1-202ENSMUST00000107170 Acin1Q9JIX8 1338 aaKnown RBP18.18■□□□□ 0.5
Setdb1-202ENSMUST00000107170 Cngb1E1AZ71 1325 aa18.15■□□□□ 0.5
Setdb1-202ENSMUST00000107170 CenpbP27790 599 aa18.15■□□□□ 0.5
Setdb1-202ENSMUST00000107170 Myt1Q8CFC2 1127 aa18.1■□□□□ 0.49
Setdb1-202ENSMUST00000107170 DiexfQ8BTT6 772 aaKnown RBP18.03■□□□□ 0.48
Setdb1-202ENSMUST00000107170 Amer1Q7TS75 1132 aa17.83■□□□□ 0.45
Setdb1-202ENSMUST00000107170 Zeb1Q64318 1117 aa17.81■□□□□ 0.44
Setdb1-202ENSMUST00000107170 Abcc9P70170 1546 aa17.61■□□□□ 0.41
Setdb1-202ENSMUST00000107170 Supt5hO55201 1082 aaKnown RBP17.6■□□□□ 0.41
Setdb1-202ENSMUST00000107170 Wdr66E9Q743 1299 aa17.55■□□□□ 0.4
Setdb1-202ENSMUST00000107170 Neurod1Q60867 357 aa17.54■□□□□ 0.4
Setdb1-202ENSMUST00000107170 Pelp1Q9DBD5 1123 aaKnown RBP17.49■□□□□ 0.39
Setdb1-202ENSMUST00000107170 Ccdc136Q3TVA9 1136 aa17.4■□□□□ 0.38
Setdb1-202ENSMUST00000107170 Gm35339A0A140LHH9 1649 aa17.26■□□□□ 0.35
Setdb1-202ENSMUST00000107170 Csrnp3P59055 597 aa17.21■□□□□ 0.35
Setdb1-202ENSMUST00000107170 Cdk11bP24788 784 aaKnown RBP17.19■□□□□ 0.34
Setdb1-202ENSMUST00000107170 1700123L14RikQ3V2K7 440 aa17.19■□□□□ 0.34
Setdb1-202ENSMUST00000107170 Esf1Q3V1V3 845 aaKnown RBP17.16■□□□□ 0.34
Setdb1-202ENSMUST00000107170 Bcl11aQ9QYE3 773 aa17.14■□□□□ 0.33
Setdb1-202ENSMUST00000107170 Abcc8B2RUS7 1588 aa17.13■□□□□ 0.33
Setdb1-202ENSMUST00000107170 Ttbk1Q6PCN3 1308 aa17.13■□□□□ 0.33
Setdb1-202ENSMUST00000107170 NefmP08553 848 aa17.05■□□□□ 0.32
Setdb1-202ENSMUST00000107170 Gm38655A0A286YDK6 273 aa17.02■□□□□ 0.32
Setdb1-202ENSMUST00000107170 Anks4bQ8K3X6 423 aa17.01■□□□□ 0.31
Setdb1-202ENSMUST00000107170 Nop58Q6DFW4 536 aaKnown RBP17.01■□□□□ 0.31
Setdb1-202ENSMUST00000107170 Aplp2Q06335 707 aa16.99■□□□□ 0.31
Setdb1-202ENSMUST00000107170 Ccdc180J3QNE4 1664 aa16.8■□□□□ 0.28
Setdb1-202ENSMUST00000107170 Trim41Q5NCC3 630 aa16.79■□□□□ 0.28
Setdb1-202ENSMUST00000107170 Ppargc1bQ8VHJ7 1014 aa16.76■□□□□ 0.27
Setdb1-202ENSMUST00000107170 Rtl5Q5DTT4 599 aa16.73■□□□□ 0.27
Setdb1-202ENSMUST00000107170 Sall2Q9QX96 1004 aa16.71■□□□□ 0.27
Setdb1-202ENSMUST00000107170 Tnnt3Q9QZ47 272 aa16.7■□□□□ 0.26
Setdb1-202ENSMUST00000107170 Zcchc6Q5BLK4 1491 aaKnown RBP16.7■□□□□ 0.26
Setdb1-202ENSMUST00000107170 4933416C03RikQ3V063 378 aa16.61■□□□□ 0.25
Setdb1-202ENSMUST00000107170 HrcG5E8J6 738 aa16.59■□□□□ 0.25
Setdb1-202ENSMUST00000107170 Gab3Q8BSM5 595 aa16.59■□□□□ 0.25
Setdb1-202ENSMUST00000107170 PrkcshO08795 521 aa16.57■□□□□ 0.24
Setdb1-202ENSMUST00000107170 Fam71e1A1L3C1 212 aa16.56■□□□□ 0.24
Setdb1-202ENSMUST00000107170 Anp32aO35381 247 aa16.52■□□□□ 0.23
Setdb1-202ENSMUST00000107170 Stra8P70278 393 aa16.5■□□□□ 0.23
Setdb1-202ENSMUST00000107170 Il27Q8K3I6 234 aa16.46■□□□□ 0.23
Setdb1-202ENSMUST00000107170 Mapk8ip2Q9ERE9 830 aa16.46■□□□□ 0.23
Setdb1-202ENSMUST00000107170 Npm2Q80W85 207 aa16.43■□□□□ 0.22
Setdb1-202ENSMUST00000107170 Rtl1Q7M732 1744 aa16.4■□□□□ 0.22
Setdb1-202ENSMUST00000107170 UbtfP25976 765 aaKnown RBP16.38■□□□□ 0.21
Setdb1-202ENSMUST00000107170 Slc24a1Q91WD8 1130 aa16.38■□□□□ 0.21
Setdb1-202ENSMUST00000107170 Mier1Q5UAK0 511 aa16.35■□□□□ 0.21
Setdb1-202ENSMUST00000107170 ClspnQ80YR7 1315 aa16.35■□□□□ 0.21
Setdb1-202ENSMUST00000107170 Dcaf1Q80TR8 1506 aa16.32■□□□□ 0.2
Setdb1-202ENSMUST00000107170 Myt1lP97500 1187 aa16.32■□□□□ 0.2
Setdb1-202ENSMUST00000107170 NacadQ5SWP3 1504 aa16.19■□□□□ 0.18
Setdb1-202ENSMUST00000107170 DaxxO35613 739 aa16.18■□□□□ 0.18
Setdb1-202ENSMUST00000107170 4930567H17RikQ3V0K5 233 aa16.14■□□□□ 0.17
Setdb1-202ENSMUST00000107170 Ifnlr1Q8CGK5 535 aa16.13■□□□□ 0.17
Setdb1-202ENSMUST00000107170 Eif5bQ05D44 1216 aaKnown RBP16.11■□□□□ 0.17
Setdb1-202ENSMUST00000107170 TonslQ6NZL6 1363 aa16.1■□□□□ 0.17
Setdb1-202ENSMUST00000107170 Rb1cc1Q9ESK9 1588 aa16.1■□□□□ 0.17
Setdb1-202ENSMUST00000107170 SafbD3YXK2 937 aaKnown RBP16.09■□□□□ 0.17
Setdb1-202ENSMUST00000107170 Pknox2Q8BG99 474 aa16.08■□□□□ 0.16
Setdb1-202ENSMUST00000107170 Ccdc9Q8VC31 543 aaKnown RBP16.05■□□□□ 0.16
Setdb1-202ENSMUST00000107170 Ap3b1Q9Z1T1 1105 aa16.04■□□□□ 0.16
Setdb1-202ENSMUST00000107170 Kdm5dQ62240 1548 aa16■□□□□ 0.15
Setdb1-202ENSMUST00000107170 Aebp2Q9Z248 504 aaKnown RBP15.98■□□□□ 0.15
Setdb1-202ENSMUST00000107170 Hdac5Q9Z2V6 1113 aa15.98■□□□□ 0.15
Setdb1-202ENSMUST00000107170 Irx3P81067 507 aa15.97■□□□□ 0.15
Setdb1-202ENSMUST00000107170 Calr4Q3TQS0 420 aa15.95■□□□□ 0.14
Setdb1-202ENSMUST00000107170 Hsp90aa1P07901 733 aaKnown RBP15.95■□□□□ 0.14
Setdb1-202ENSMUST00000107170 Hnrnpul2Q00PI9 745 aaKnown RBP15.95■□□□□ 0.14
Setdb1-202ENSMUST00000107170 Ppp4r2Q0VGB7 417 aa15.94■□□□□ 0.14
Setdb1-202ENSMUST00000107170 Npm1Q61937 292 aaKnown RBP15.94■□□□□ 0.14
Setdb1-202ENSMUST00000107170 Ube2uB1AUC4 352 aa15.89■□□□□ 0.13
Setdb1-202ENSMUST00000107170 Ubl4bQ9CQ84 188 aa15.88■□□□□ 0.13
Setdb1-202ENSMUST00000107170 Ccdc27Q3V036 639 aa15.88■□□□□ 0.13
Setdb1-202ENSMUST00000107170 Gtf3c3Q3TMP1 882 aa15.85■□□□□ 0.13
Setdb1-202ENSMUST00000107170 Wdr43Q6ZQL4 677 aaKnown RBP15.8■□□□□ 0.12
Setdb1-202ENSMUST00000107170 NclP09405 707 aaKnown RBP15.79■□□□□ 0.12
Setdb1-202ENSMUST00000107170 Upf2A2AT37 1269 aaKnown RBP15.79■□□□□ 0.12
Setdb1-202ENSMUST00000107170 NrdcQ8BHG1 1161 aa15.78■□□□□ 0.12
Setdb1-202ENSMUST00000107170 ScribQ80U72 1612 aa15.78■□□□□ 0.12
Setdb1-202ENSMUST00000107170 Brd4Q9ESU6 1400 aaKnown RBP15.73■□□□□ 0.11
Setdb1-202ENSMUST00000107170 Baz1aO88379 1555 aa15.71■□□□□ 0.11
Setdb1-202ENSMUST00000107170 Ythdc1E9Q5K9 736 aaKnown RBP15.71■□□□□ 0.11
Setdb1-202ENSMUST00000107170 Plcd4Q8K3R3 807 aa15.71■□□□□ 0.11
Setdb1-202ENSMUST00000107170 Taok2Q6ZQ29 1240 aa15.69■□□□□ 0.1
Setdb1-202ENSMUST00000107170 NeflP08551 543 aa15.69■□□□□ 0.1
Setdb1-202ENSMUST00000107170 Supt16hQ920B9 1047 aa15.63■□□□□ 0.09
Setdb1-202ENSMUST00000107170 Sycp2Q9CUU3 1500 aa15.6■□□□□ 0.09
Setdb1-202ENSMUST00000107170 Nolc1E9Q5C9 702 aaKnown RBP15.55■□□□□ 0.08
Setdb1-202ENSMUST00000107170 Fgd1P52734 960 aa15.53■□□□□ 0.08
Setdb1-202ENSMUST00000107170 Ercc6F8VPZ5 1481 aa15.52■□□□□ 0.08
Setdb1-202ENSMUST00000107170 Rtn4Q99P72 1162 aaKnown RBP15.51■□□□□ 0.07
Setdb1-202ENSMUST00000107170 Chic1Q8CBW7 227 aa15.51■□□□□ 0.07
Setdb1-202ENSMUST00000107170 Eid3Q3V124 375 aa15.5■□□□□ 0.07
Setdb1-202ENSMUST00000107170 Pds5bQ4VA53 1446 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 315.5 ms