RNA–Protein interactions for RNA: ENSMUST00000106913.2

Trim21-202, Transcript of E3 ubiquitin-protein ligase TRIM21, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim21, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21-202ENSMUST00000106913 NischQ80TM9 1593 aa15.96■□□□□ 0.15
Trim21-202ENSMUST00000106913 Gm35339A0A140LHH9 1649 aa15.55■□□□□ 0.08
Trim21-202ENSMUST00000106913 Abcc9P70170 1546 aa15.46■□□□□ 0.07
Trim21-202ENSMUST00000106913 Abcc8B2RUS7 1588 aa15.12■□□□□ 0.01
Trim21-202ENSMUST00000106913 Rhox8Q6VSS7 320 aa15.03■□□□□ -0
Trim21-202ENSMUST00000106913 Rtl1Q7M732 1744 aa14.66□□□□□ -0.06
Trim21-202ENSMUST00000106913 Ccdc180J3QNE4 1664 aa14.45□□□□□ -0.1
Trim21-202ENSMUST00000106913 Rpgrip1Q9EPQ2 1331 aa14.43□□□□□ -0.1
Trim21-202ENSMUST00000106913 ScribQ80U72 1612 aa14.25□□□□□ -0.13
Trim21-202ENSMUST00000106913 Zcchc6Q5BLK4 1491 aaKnown RBP14.14□□□□□ -0.15
Trim21-202ENSMUST00000106913 Dcaf1Q80TR8 1506 aa14.07□□□□□ -0.16
Trim21-202ENSMUST00000106913 Rb1cc1Q9ESK9 1588 aa13.99□□□□□ -0.17
Trim21-202ENSMUST00000106913 Ccdc136Q3TVA9 1136 aa13.94□□□□□ -0.18
Trim21-202ENSMUST00000106913 HrcG5E8J6 738 aa13.84□□□□□ -0.19
Trim21-202ENSMUST00000106913 Kdm5dQ62240 1548 aa13.82□□□□□ -0.2
Trim21-202ENSMUST00000106913 Baz1aO88379 1555 aa13.81□□□□□ -0.2
Trim21-202ENSMUST00000106913 Mapk8ip2Q9ERE9 830 aa13.77□□□□□ -0.21
Trim21-202ENSMUST00000106913 NacadQ5SWP3 1504 aa13.77□□□□□ -0.21
Trim21-202ENSMUST00000106913 Acin1Q9JIX8 1338 aaKnown RBP13.7□□□□□ -0.22
Trim21-202ENSMUST00000106913 Pcgf6Q99NA9 353 aa13.67□□□□□ -0.22
Trim21-202ENSMUST00000106913 Ehmt2Q9Z148 1263 aaKnown RBP13.67□□□□□ -0.22
Trim21-202ENSMUST00000106913 Trim41Q5NCC3 630 aa13.62□□□□□ -0.23
Trim21-202ENSMUST00000106913 Crybg2B7ZCC2 1516 aa13.52□□□□□ -0.25
Trim21-202ENSMUST00000106913 Sycp2Q9CUU3 1500 aa13.51□□□□□ -0.25
Trim21-202ENSMUST00000106913 Chic1Q8CBW7 227 aa13.49□□□□□ -0.25
Trim21-202ENSMUST00000106913 Smarca2Q6DIC0 1577 aa13.49□□□□□ -0.25
Trim21-202ENSMUST00000106913 Myt1Q8CFC2 1127 aa13.47□□□□□ -0.25
Trim21-202ENSMUST00000106913 Las1lA2BE28 776 aaKnown RBP13.37□□□□□ -0.27
Trim21-202ENSMUST00000106913 Cep164Q5DU05 1446 aa13.37□□□□□ -0.27
Trim21-202ENSMUST00000106913 BicraF8VPZ9 1578 aa13.33□□□□□ -0.28
Trim21-202ENSMUST00000106913 Cngb1E1AZ71 1325 aa13.31□□□□□ -0.28
Trim21-202ENSMUST00000106913 Brd4Q9ESU6 1400 aaKnown RBP13.23□□□□□ -0.29
Trim21-202ENSMUST00000106913 Cecr2E9Q2Z1 1453 aa13.21□□□□□ -0.29
Trim21-202ENSMUST00000106913 CenpbP27790 599 aa13.21□□□□□ -0.29
Trim21-202ENSMUST00000106913 Gab3Q8BSM5 595 aa13.21□□□□□ -0.29
Trim21-202ENSMUST00000106913 Rsf1E9PWW9 1441 aaKnown RBP13.2□□□□□ -0.3
Trim21-202ENSMUST00000106913 Supt5hO55201 1082 aaKnown RBP13.18□□□□□ -0.3
Trim21-202ENSMUST00000106913 DiexfQ8BTT6 772 aaKnown RBP13.16□□□□□ -0.3
Trim21-202ENSMUST00000106913 Neurod1Q60867 357 aa13.13□□□□□ -0.31
Trim21-202ENSMUST00000106913 Golga3P55937 1487 aa13.11□□□□□ -0.31
Trim21-202ENSMUST00000106913 Ccdc88bQ4QRL3 1481 aa13.11□□□□□ -0.31
Trim21-202ENSMUST00000106913 Synj1Q8CHC4 1574 aa13.1□□□□□ -0.31
Trim21-202ENSMUST00000106913 Esf1Q3V1V3 845 aaKnown RBP13.1□□□□□ -0.31
Trim21-202ENSMUST00000106913 CftrP26361 1476 aa13.01□□□□□ -0.33
Trim21-202ENSMUST00000106913 1700123L14RikQ3V2K7 440 aa12.97□□□□□ -0.33
Trim21-202ENSMUST00000106913 Top2bQ64511 1612 aa12.9□□□□□ -0.34
Trim21-202ENSMUST00000106913 Cttnbp2B9EJA2 1648 aa12.9□□□□□ -0.34
Trim21-202ENSMUST00000106913 Mier1Q5UAK0 511 aa12.88□□□□□ -0.35
Trim21-202ENSMUST00000106913 Pds5bQ4VA53 1446 aaKnown RBP12.87□□□□□ -0.35
Trim21-202ENSMUST00000106913 Dnajc5bQ9CQ94 199 aa12.86□□□□□ -0.35
Trim21-202ENSMUST00000106913 Bcl11aQ9QYE3 773 aa12.86□□□□□ -0.35
Trim21-202ENSMUST00000106913 NefmP08553 848 aa12.85□□□□□ -0.35
Trim21-202ENSMUST00000106913 Smarca4Q3TKT4 1613 aaKnown RBP12.84□□□□□ -0.35
Trim21-202ENSMUST00000106913 Zeb1Q64318 1117 aa12.83□□□□□ -0.36
Trim21-202ENSMUST00000106913 Cc2d2aQ8CFW7 1633 aa12.81□□□□□ -0.36
Trim21-202ENSMUST00000106913 Anks4bQ8K3X6 423 aa12.79□□□□□ -0.36
Trim21-202ENSMUST00000106913 Atad2bE9Q166 1460 aaKnown RBP12.78□□□□□ -0.36
Trim21-202ENSMUST00000106913 Aplp2Q06335 707 aa12.75□□□□□ -0.37
Trim21-202ENSMUST00000106913 Fmn1Q05860 1466 aa12.74□□□□□ -0.37
Trim21-202ENSMUST00000106913 UbtfP25976 765 aaKnown RBP12.74□□□□□ -0.37
Trim21-202ENSMUST00000106913 Rapgef2Q8CHG7 1496 aa12.73□□□□□ -0.37
Trim21-202ENSMUST00000106913 Csrnp3P59055 597 aa12.73□□□□□ -0.37
Trim21-202ENSMUST00000106913 Myt1lP97500 1187 aa12.72□□□□□ -0.37
Trim21-202ENSMUST00000106913 Thoc2B1AZI6 1594 aaKnown RBP12.71□□□□□ -0.37
Trim21-202ENSMUST00000106913 Iqgap2Q3UQ44 1575 aa12.69□□□□□ -0.38
Trim21-202ENSMUST00000106913 Top2aQ01320 1528 aaKnown RBP12.68□□□□□ -0.38
Trim21-202ENSMUST00000106913 Npm2Q80W85 207 aa12.66□□□□□ -0.38
Trim21-202ENSMUST00000106913 Cep162Q6ZQ06 1403 aa12.65□□□□□ -0.38
Trim21-202ENSMUST00000106913 Sall2Q9QX96 1004 aa12.65□□□□□ -0.39
Trim21-202ENSMUST00000106913 Ercc6F8VPZ5 1481 aa12.63□□□□□ -0.39
Trim21-202ENSMUST00000106913 Frmpd1A2AKB4 1549 aa12.55□□□□□ -0.4
Trim21-202ENSMUST00000106913 Amer1Q7TS75 1132 aa12.55□□□□□ -0.4
Trim21-202ENSMUST00000106913 Wdr62Q3U3T8 1523 aa12.54□□□□□ -0.4
Trim21-202ENSMUST00000106913 Clip1Q922J3 1391 aa12.53□□□□□ -0.4
Trim21-202ENSMUST00000106913 Plekhg3Q4VAC9 1341 aa12.51□□□□□ -0.41
Trim21-202ENSMUST00000106913 Wdr66E9Q743 1299 aa12.5□□□□□ -0.41
Trim21-202ENSMUST00000106913 Aebp2Q9Z248 504 aaKnown RBP12.47□□□□□ -0.41
Trim21-202ENSMUST00000106913 Il27Q8K3I6 234 aa12.46□□□□□ -0.41
Trim21-202ENSMUST00000106913 PrkcshO08795 521 aa12.45□□□□□ -0.42
Trim21-202ENSMUST00000106913 TnnQ80Z71 1560 aa12.45□□□□□ -0.42
Trim21-202ENSMUST00000106913 Eif4g1Q6NZJ6 1600 aaKnown RBP12.45□□□□□ -0.42
Trim21-202ENSMUST00000106913 Fam135aQ6NS59 1506 aa12.44□□□□□ -0.42
Trim21-202ENSMUST00000106913 Gm38655A0A286YDK6 273 aa12.42□□□□□ -0.42
Trim21-202ENSMUST00000106913 Phldb1Q6PDH0 1371 aaKnown RBP12.42□□□□□ -0.42
Trim21-202ENSMUST00000106913 PtprkP35822 1457 aa12.4□□□□□ -0.42
Trim21-202ENSMUST00000106913 Arhgap35Q91YM2 1499 aa12.4□□□□□ -0.42
Trim21-202ENSMUST00000106913 TonslQ6NZL6 1363 aa12.4□□□□□ -0.42
Trim21-202ENSMUST00000106913 Unc13aQ4KUS2 1712 aa12.39□□□□□ -0.43
Trim21-202ENSMUST00000106913 Cdk11bP24788 784 aaKnown RBP12.38□□□□□ -0.43
Trim21-202ENSMUST00000106913 Kif15Q6P9L6 1387 aa12.38□□□□□ -0.43
Trim21-202ENSMUST00000106913 Ap3b1Q9Z1T1 1105 aa12.38□□□□□ -0.43
Trim21-202ENSMUST00000106913 Ubl4bQ9CQ84 188 aa12.37□□□□□ -0.43
Trim21-202ENSMUST00000106913 ClspnQ80YR7 1315 aa12.37□□□□□ -0.43
Trim21-202ENSMUST00000106913 Ppargc1bQ8VHJ7 1014 aa12.36□□□□□ -0.43
Trim21-202ENSMUST00000106913 NrkQ9R0G8 1455 aa12.35□□□□□ -0.43
Trim21-202ENSMUST00000106913 Eea1Q8BL66 1411 aa12.35□□□□□ -0.43
Trim21-202ENSMUST00000106913 Lamc3Q9R0B6 1581 aa12.35□□□□□ -0.43
Trim21-202ENSMUST00000106913 Ncapd3Q6ZQK0 1506 aa12.35□□□□□ -0.43
Trim21-202ENSMUST00000106913 Nop58Q6DFW4 536 aaKnown RBP12.34□□□□□ -0.43
Trim21-202ENSMUST00000106913 Setd5Q5XJV7 1441 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms