RNA–Protein interactions for RNA: ENSMUST00000105786.2

Spen-202, Transcript of Msx2-interacting protein, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Spen, Length 12,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-202ENSMUST00000105786 Rhox8Q6VSS7 320 aa17■□□□□ 0.31
Spen-202ENSMUST00000105786 Cngb1E1AZ71 1325 aa16.4■□□□□ 0.22
Spen-202ENSMUST00000105786 Pelp1Q9DBD5 1123 aaKnown RBP16.39■□□□□ 0.21
Spen-202ENSMUST00000105786 Rpgrip1Q9EPQ2 1331 aa16.22■□□□□ 0.19
Spen-202ENSMUST00000105786 Las1lA2BE28 776 aaKnown RBP16.12■□□□□ 0.17
Spen-202ENSMUST00000105786 Ehmt2Q9Z148 1263 aaKnown RBP15.98■□□□□ 0.15
Spen-202ENSMUST00000105786 Amer1Q7TS75 1132 aa15.93■□□□□ 0.14
Spen-202ENSMUST00000105786 Wdr66E9Q743 1299 aa15.7■□□□□ 0.1
Spen-202ENSMUST00000105786 Ube2uB1AUC4 352 aa15.67■□□□□ 0.1
Spen-202ENSMUST00000105786 4930567H17RikQ3V0K5 233 aa15.59■□□□□ 0.09
Spen-202ENSMUST00000105786 Zeb1Q64318 1117 aa15.34■□□□□ 0.05
Spen-202ENSMUST00000105786 CenpbP27790 599 aa15.17■□□□□ 0.02
Spen-202ENSMUST00000105786 Esf1Q3V1V3 845 aaKnown RBP15.11■□□□□ 0.01
Spen-202ENSMUST00000105786 Ttbk1Q6PCN3 1308 aa15.11■□□□□ 0.01
Spen-202ENSMUST00000105786 Stra8P70278 393 aa15□□□□□ -0.01
Spen-202ENSMUST00000105786 Npm2Q80W85 207 aa14.96□□□□□ -0.02
Spen-202ENSMUST00000105786 Slc24a1Q91WD8 1130 aa14.94□□□□□ -0.02
Spen-202ENSMUST00000105786 4933416C03RikQ3V063 378 aa14.94□□□□□ -0.02
Spen-202ENSMUST00000105786 Ccdc136Q3TVA9 1136 aa14.81□□□□□ -0.04
Spen-202ENSMUST00000105786 Gab3Q8BSM5 595 aa14.79□□□□□ -0.04
Spen-202ENSMUST00000105786 Myt1lP97500 1187 aa14.78□□□□□ -0.04
Spen-202ENSMUST00000105786 NeflP08551 543 aa14.66□□□□□ -0.06
Spen-202ENSMUST00000105786 Myt1Q8CFC2 1127 aa14.54□□□□□ -0.08
Spen-202ENSMUST00000105786 Anp32bQ9EST5 272 aaKnown RBP14.52□□□□□ -0.09
Spen-202ENSMUST00000105786 NrdcQ8BHG1 1161 aa14.48□□□□□ -0.09
Spen-202ENSMUST00000105786 NefmP08553 848 aa14.46□□□□□ -0.1
Spen-202ENSMUST00000105786 UbtfP25976 765 aaKnown RBP14.45□□□□□ -0.1
Spen-202ENSMUST00000105786 Trim41Q5NCC3 630 aa14.41□□□□□ -0.1
Spen-202ENSMUST00000105786 Eif5bQ05D44 1216 aaKnown RBP14.39□□□□□ -0.11
Spen-202ENSMUST00000105786 Os9Q8K2C7 672 aa14.35□□□□□ -0.11
Spen-202ENSMUST00000105786 Cdk11bP24788 784 aaKnown RBP14.33□□□□□ -0.12
Spen-202ENSMUST00000105786 Ppargc1bQ8VHJ7 1014 aa14.33□□□□□ -0.12
Spen-202ENSMUST00000105786 Tnnt3Q9QZ47 272 aa14.32□□□□□ -0.12
Spen-202ENSMUST00000105786 HrcG5E8J6 738 aa14.31□□□□□ -0.12
Spen-202ENSMUST00000105786 Rtl1Q7M732 1744 aa14.27□□□□□ -0.12
Spen-202ENSMUST00000105786 CatipB9EKE5 520 aa14.25□□□□□ -0.13
Spen-202ENSMUST00000105786 Neurod1Q60867 357 aa14.25□□□□□ -0.13
Spen-202ENSMUST00000105786 Acin1Q9JIX8 1338 aaKnown RBP14.21□□□□□ -0.13
Spen-202ENSMUST00000105786 Rtl5Q5DTT4 599 aa14.2□□□□□ -0.14
Spen-202ENSMUST00000105786 NclP09405 707 aaKnown RBP14.16□□□□□ -0.14
Spen-202ENSMUST00000105786 DaxxO35613 739 aa14.12□□□□□ -0.15
Spen-202ENSMUST00000105786 Nop58Q6DFW4 536 aaKnown RBP14.09□□□□□ -0.15
Spen-202ENSMUST00000105786 Fam50aQ9WV03 339 aaKnown RBP14.07□□□□□ -0.16
Spen-202ENSMUST00000105786 DiexfQ8BTT6 772 aaKnown RBP14.07□□□□□ -0.16
Spen-202ENSMUST00000105786 Ccdc180J3QNE4 1664 aa14.06□□□□□ -0.16
Spen-202ENSMUST00000105786 Gm38655A0A286YDK6 273 aa14.01□□□□□ -0.17
Spen-202ENSMUST00000105786 Pcgf6Q99NA9 353 aa14□□□□□ -0.17
Spen-202ENSMUST00000105786 Ythdc1E9Q5K9 736 aaKnown RBP13.96□□□□□ -0.18
Spen-202ENSMUST00000105786 Chic1Q8CBW7 227 aa13.91□□□□□ -0.18
Spen-202ENSMUST00000105786 Ap3b1Q9Z1T1 1105 aa13.9□□□□□ -0.18
Spen-202ENSMUST00000105786 Il27Q8K3I6 234 aa13.9□□□□□ -0.18
Spen-202ENSMUST00000105786 Lmod3E9QA62 571 aa13.87□□□□□ -0.19
Spen-202ENSMUST00000105786 Upf2A2AT37 1269 aaKnown RBP13.87□□□□□ -0.19
Spen-202ENSMUST00000105786 ArxO35085 564 aa13.86□□□□□ -0.19
Spen-202ENSMUST00000105786 Supt5hO55201 1082 aaKnown RBP13.84□□□□□ -0.19
Spen-202ENSMUST00000105786 Gm13697A2AK42 830 aa13.84□□□□□ -0.19
Spen-202ENSMUST00000105786 Polr3glQ8R0C0 218 aa13.82□□□□□ -0.2
Spen-202ENSMUST00000105786 Nlrp6Q91WS2 869 aa13.81□□□□□ -0.2
Spen-202ENSMUST00000105786 Hsp90aa1P07901 733 aaKnown RBP13.81□□□□□ -0.2
Spen-202ENSMUST00000105786 TonslQ6NZL6 1363 aa13.76□□□□□ -0.21
Spen-202ENSMUST00000105786 Anp32aO35381 247 aa13.75□□□□□ -0.21
Spen-202ENSMUST00000105786 Zbtb7cQ8VCZ7 619 aa13.74□□□□□ -0.21
Spen-202ENSMUST00000105786 Atp1b4Q99ME6 356 aa13.71□□□□□ -0.21
Spen-202ENSMUST00000105786 Hnrnpul2Q00PI9 745 aaKnown RBP13.7□□□□□ -0.22
Spen-202ENSMUST00000105786 Prdm10Q3UTQ7 1184 aa13.61□□□□□ -0.23
Spen-202ENSMUST00000105786 Gm13695A2AK44 830 aa13.6□□□□□ -0.23
Spen-202ENSMUST00000105786 Zbtb4Q5F293 982 aa13.6□□□□□ -0.23
Spen-202ENSMUST00000105786 Erich6D3Z6S9 713 aa13.6□□□□□ -0.23
Spen-202ENSMUST00000105786 DekQ7TNV0 380 aaKnown RBP13.57□□□□□ -0.24
Spen-202ENSMUST00000105786 Znf326O88291 580 aa13.54□□□□□ -0.24
Spen-202ENSMUST00000105786 Mapk8ip2Q9ERE9 830 aa13.54□□□□□ -0.24
Spen-202ENSMUST00000105786 Rangap1P46061 589 aaKnown RBP13.52□□□□□ -0.25
Spen-202ENSMUST00000105786 Csrnp3P59055 597 aa13.49□□□□□ -0.25
Spen-202ENSMUST00000105786 Vsig10D3YX43 558 aa13.49□□□□□ -0.25
Spen-202ENSMUST00000105786 Trim44Q9QXA7 346 aa13.49□□□□□ -0.25
Spen-202ENSMUST00000105786 Ifnlr1Q8CGK5 535 aa13.42□□□□□ -0.26
Spen-202ENSMUST00000105786 Hdac5Q9Z2V6 1113 aa13.4□□□□□ -0.26
Spen-202ENSMUST00000105786 ClspnQ80YR7 1315 aa13.37□□□□□ -0.27
Spen-202ENSMUST00000105786 Plppr3Q7TPB0 716 aa13.36□□□□□ -0.27
Spen-202ENSMUST00000105786 NischQ80TM9 1593 aa13.34□□□□□ -0.27
Spen-202ENSMUST00000105786 Fgd1P52734 960 aa13.32□□□□□ -0.28
Spen-202ENSMUST00000105786 PtmaP26350 111 aa13.31□□□□□ -0.28
Spen-202ENSMUST00000105786 Ppp4r2Q0VGB7 417 aa13.28□□□□□ -0.28
Spen-202ENSMUST00000105786 Mier1Q5UAK0 511 aa13.27□□□□□ -0.28
Spen-202ENSMUST00000105786 PnnO35691 725 aaKnown RBP13.27□□□□□ -0.29
Spen-202ENSMUST00000105786 Ccdc9Q8VC31 543 aaKnown RBP13.27□□□□□ -0.29
Spen-202ENSMUST00000105786 Lmod2Q3UHZ5 550 aa13.26□□□□□ -0.29
Spen-202ENSMUST00000105786 Znf316Q6PGE4 1016 aa13.24□□□□□ -0.29
Spen-202ENSMUST00000105786 Adam1bQ8R534 806 aa13.24□□□□□ -0.29
Spen-202ENSMUST00000105786 Calr4Q3TQS0 420 aa13.21□□□□□ -0.29
Spen-202ENSMUST00000105786 Rad21Q61550 635 aaKnown RBP13.2□□□□□ -0.3
Spen-202ENSMUST00000105786 Hsp90ab1P11499 724 aaKnown RBP13.18□□□□□ -0.3
Spen-202ENSMUST00000105786 Clstn1Q9EPL2 979 aa13.18□□□□□ -0.3
Spen-202ENSMUST00000105786 Arid4bA2CG63 1314 aaKnown RBP13.17□□□□□ -0.3
Spen-202ENSMUST00000105786 Plekhg3Q4VAC9 1341 aa13.16□□□□□ -0.3
Spen-202ENSMUST00000105786 Slc4a1apE9PX68 744 aa13.16□□□□□ -0.3
Spen-202ENSMUST00000105786 Mak16Q8BGS0 296 aaKnown RBP13.15□□□□□ -0.3
Spen-202ENSMUST00000105786 Zcchc6Q5BLK4 1491 aaKnown RBP13.14□□□□□ -0.31
Spen-202ENSMUST00000105786 Trim26Q99PN3 545 aa13.14□□□□□ -0.31
Spen-202ENSMUST00000105786 BccipQ9CWI3 316 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 1212.4 ms