RNA–Protein interactions for RNA: ENSMUST00000105235.9

Smarcc2-203, Transcript of SWI/SNF complex subunit SMARCC2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc2, Length 4,032 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2-203ENSMUST00000105235 NischQ80TM9 1593 aa17.75■□□□□ 0.43
Smarcc2-203ENSMUST00000105235 Rhox8Q6VSS7 320 aa17.62■□□□□ 0.41
Smarcc2-203ENSMUST00000105235 Abcc9P70170 1546 aa17.1■□□□□ 0.33
Smarcc2-203ENSMUST00000105235 Gm35339A0A140LHH9 1649 aa17.03■□□□□ 0.32
Smarcc2-203ENSMUST00000105235 Abcc8B2RUS7 1588 aa16.75■□□□□ 0.27
Smarcc2-203ENSMUST00000105235 Ehmt2Q9Z148 1263 aaKnown RBP16.69■□□□□ 0.26
Smarcc2-203ENSMUST00000105235 Rpgrip1Q9EPQ2 1331 aa16.51■□□□□ 0.23
Smarcc2-203ENSMUST00000105235 Rtl1Q7M732 1744 aa16.11■□□□□ 0.17
Smarcc2-203ENSMUST00000105235 Ccdc180J3QNE4 1664 aa15.97■□□□□ 0.15
Smarcc2-203ENSMUST00000105235 Ccdc136Q3TVA9 1136 aa15.93■□□□□ 0.14
Smarcc2-203ENSMUST00000105235 Zeb1Q64318 1117 aa15.8■□□□□ 0.12
Smarcc2-203ENSMUST00000105235 Acin1Q9JIX8 1338 aaKnown RBP15.79■□□□□ 0.12
Smarcc2-203ENSMUST00000105235 Las1lA2BE28 776 aaKnown RBP15.64■□□□□ 0.09
Smarcc2-203ENSMUST00000105235 Wdr66E9Q743 1299 aa15.6■□□□□ 0.09
Smarcc2-203ENSMUST00000105235 Pcgf6Q99NA9 353 aa15.59■□□□□ 0.09
Smarcc2-203ENSMUST00000105235 Gab3Q8BSM5 595 aa15.58■□□□□ 0.08
Smarcc2-203ENSMUST00000105235 Zcchc6Q5BLK4 1491 aaKnown RBP15.55■□□□□ 0.08
Smarcc2-203ENSMUST00000105235 Rb1cc1Q9ESK9 1588 aa15.54■□□□□ 0.08
Smarcc2-203ENSMUST00000105235 Trim41Q5NCC3 630 aa15.54■□□□□ 0.08
Smarcc2-203ENSMUST00000105235 Dcaf1Q80TR8 1506 aa15.53■□□□□ 0.08
Smarcc2-203ENSMUST00000105235 ScribQ80U72 1612 aa15.49■□□□□ 0.07
Smarcc2-203ENSMUST00000105235 HrcG5E8J6 738 aa15.45■□□□□ 0.06
Smarcc2-203ENSMUST00000105235 Cngb1E1AZ71 1325 aa15.42■□□□□ 0.06
Smarcc2-203ENSMUST00000105235 Kdm5dQ62240 1548 aa15.36■□□□□ 0.05
Smarcc2-203ENSMUST00000105235 Baz1aO88379 1555 aa15.32■□□□□ 0.04
Smarcc2-203ENSMUST00000105235 Supt5hO55201 1082 aaKnown RBP15.29■□□□□ 0.04
Smarcc2-203ENSMUST00000105235 NacadQ5SWP3 1504 aa15.27■□□□□ 0.04
Smarcc2-203ENSMUST00000105235 Esf1Q3V1V3 845 aaKnown RBP15.15■□□□□ 0.02
Smarcc2-203ENSMUST00000105235 Ppargc1bQ8VHJ7 1014 aa15.11■□□□□ 0.01
Smarcc2-203ENSMUST00000105235 UbtfP25976 765 aaKnown RBP15.09■□□□□ 0.01
Smarcc2-203ENSMUST00000105235 NefmP08553 848 aa15.07■□□□□ 0
Smarcc2-203ENSMUST00000105235 Myt1lP97500 1187 aa15.07■□□□□ 0
Smarcc2-203ENSMUST00000105235 CenpbP27790 599 aa15.06■□□□□ 0
Smarcc2-203ENSMUST00000105235 Crybg2B7ZCC2 1516 aa14.95□□□□□ -0.02
Smarcc2-203ENSMUST00000105235 Neurod1Q60867 357 aa14.94□□□□□ -0.02
Smarcc2-203ENSMUST00000105235 Cdk11bP24788 784 aaKnown RBP14.92□□□□□ -0.02
Smarcc2-203ENSMUST00000105235 Smarca2Q6DIC0 1577 aa14.91□□□□□ -0.02
Smarcc2-203ENSMUST00000105235 Sycp2Q9CUU3 1500 aa14.89□□□□□ -0.03
Smarcc2-203ENSMUST00000105235 Cep164Q5DU05 1446 aa14.89□□□□□ -0.03
Smarcc2-203ENSMUST00000105235 Npm2Q80W85 207 aa14.89□□□□□ -0.03
Smarcc2-203ENSMUST00000105235 Chic1Q8CBW7 227 aa14.84□□□□□ -0.03
Smarcc2-203ENSMUST00000105235 Nop58Q6DFW4 536 aaKnown RBP14.83□□□□□ -0.03
Smarcc2-203ENSMUST00000105235 Brd4Q9ESU6 1400 aaKnown RBP14.83□□□□□ -0.04
Smarcc2-203ENSMUST00000105235 Ube2uB1AUC4 352 aa14.82□□□□□ -0.04
Smarcc2-203ENSMUST00000105235 Mier1Q5UAK0 511 aa14.77□□□□□ -0.05
Smarcc2-203ENSMUST00000105235 Slc24a1Q91WD8 1130 aa14.75□□□□□ -0.05
Smarcc2-203ENSMUST00000105235 Gm38655A0A286YDK6 273 aa14.73□□□□□ -0.05
Smarcc2-203ENSMUST00000105235 Pelp1Q9DBD5 1123 aaKnown RBP14.72□□□□□ -0.05
Smarcc2-203ENSMUST00000105235 Cecr2E9Q2Z1 1453 aa14.71□□□□□ -0.06
Smarcc2-203ENSMUST00000105235 Rsf1E9PWW9 1441 aaKnown RBP14.7□□□□□ -0.06
Smarcc2-203ENSMUST00000105235 Sall2Q9QX96 1004 aa14.69□□□□□ -0.06
Smarcc2-203ENSMUST00000105235 Csrnp3P59055 597 aa14.67□□□□□ -0.06
Smarcc2-203ENSMUST00000105235 Golga3P55937 1487 aa14.64□□□□□ -0.07
Smarcc2-203ENSMUST00000105235 Ccdc88bQ4QRL3 1481 aa14.59□□□□□ -0.07
Smarcc2-203ENSMUST00000105235 Ttbk1Q6PCN3 1308 aa14.58□□□□□ -0.08
Smarcc2-203ENSMUST00000105235 Synj1Q8CHC4 1574 aa14.53□□□□□ -0.08
Smarcc2-203ENSMUST00000105235 Myt1Q8CFC2 1127 aa14.53□□□□□ -0.08
Smarcc2-203ENSMUST00000105235 Amer1Q7TS75 1132 aa14.51□□□□□ -0.09
Smarcc2-203ENSMUST00000105235 CftrP26361 1476 aa14.5□□□□□ -0.09
Smarcc2-203ENSMUST00000105235 TonslQ6NZL6 1363 aa14.47□□□□□ -0.09
Smarcc2-203ENSMUST00000105235 BicraF8VPZ9 1578 aa14.47□□□□□ -0.09
Smarcc2-203ENSMUST00000105235 Anks4bQ8K3X6 423 aa14.46□□□□□ -0.09
Smarcc2-203ENSMUST00000105235 Ap3b1Q9Z1T1 1105 aa14.45□□□□□ -0.1
Smarcc2-203ENSMUST00000105235 Il27Q8K3I6 234 aa14.44□□□□□ -0.1
Smarcc2-203ENSMUST00000105235 Stra8P70278 393 aa14.43□□□□□ -0.1
Smarcc2-203ENSMUST00000105235 1700123L14RikQ3V2K7 440 aa14.43□□□□□ -0.1
Smarcc2-203ENSMUST00000105235 Mapk8ip2Q9ERE9 830 aa14.42□□□□□ -0.1
Smarcc2-203ENSMUST00000105235 ClspnQ80YR7 1315 aa14.4□□□□□ -0.1
Smarcc2-203ENSMUST00000105235 NclP09405 707 aaKnown RBP14.38□□□□□ -0.11
Smarcc2-203ENSMUST00000105235 Eif5bQ05D44 1216 aaKnown RBP14.38□□□□□ -0.11
Smarcc2-203ENSMUST00000105235 Tnnt3Q9QZ47 272 aa14.37□□□□□ -0.11
Smarcc2-203ENSMUST00000105235 Fam50aQ9WV03 339 aaKnown RBP14.37□□□□□ -0.11
Smarcc2-203ENSMUST00000105235 DiexfQ8BTT6 772 aaKnown RBP14.37□□□□□ -0.11
Smarcc2-203ENSMUST00000105235 Plekhg3Q4VAC9 1341 aa14.32□□□□□ -0.12
Smarcc2-203ENSMUST00000105235 Eid3Q3V124 375 aa14.31□□□□□ -0.12
Smarcc2-203ENSMUST00000105235 Cttnbp2B9EJA2 1648 aa14.29□□□□□ -0.12
Smarcc2-203ENSMUST00000105235 Smarca4Q3TKT4 1613 aaKnown RBP14.28□□□□□ -0.12
Smarcc2-203ENSMUST00000105235 Aebp2Q9Z248 504 aaKnown RBP14.27□□□□□ -0.13
Smarcc2-203ENSMUST00000105235 Aplp2Q06335 707 aa14.26□□□□□ -0.13
Smarcc2-203ENSMUST00000105235 Fmn1Q05860 1466 aa14.21□□□□□ -0.13
Smarcc2-203ENSMUST00000105235 Top2bQ64511 1612 aa14.2□□□□□ -0.14
Smarcc2-203ENSMUST00000105235 Cc2d2aQ8CFW7 1633 aa14.15□□□□□ -0.14
Smarcc2-203ENSMUST00000105235 NrdcQ8BHG1 1161 aa14.14□□□□□ -0.15
Smarcc2-203ENSMUST00000105235 4933416C03RikQ3V063 378 aa14.14□□□□□ -0.15
Smarcc2-203ENSMUST00000105235 Cep162Q6ZQ06 1403 aa14.12□□□□□ -0.15
Smarcc2-203ENSMUST00000105235 Rapgef2Q8CHG7 1496 aa14.12□□□□□ -0.15
Smarcc2-203ENSMUST00000105235 Anp32aO35381 247 aa14.11□□□□□ -0.15
Smarcc2-203ENSMUST00000105235 Clip1Q922J3 1391 aa14.1□□□□□ -0.15
Smarcc2-203ENSMUST00000105235 Iqgap2Q3UQ44 1575 aa14.1□□□□□ -0.15
Smarcc2-203ENSMUST00000105235 Atad2bE9Q166 1460 aaKnown RBP14.08□□□□□ -0.16
Smarcc2-203ENSMUST00000105235 Lmod2Q3UHZ5 550 aa14.07□□□□□ -0.16
Smarcc2-203ENSMUST00000105235 Pds5bQ4VA53 1446 aaKnown RBP14.06□□□□□ -0.16
Smarcc2-203ENSMUST00000105235 Fam71e1A1L3C1 212 aa14.05□□□□□ -0.16
Smarcc2-203ENSMUST00000105235 Ubl4bQ9CQ84 188 aa14.05□□□□□ -0.16
Smarcc2-203ENSMUST00000105235 Top2aQ01320 1528 aaKnown RBP14.04□□□□□ -0.16
Smarcc2-203ENSMUST00000105235 SafbD3YXK2 937 aaKnown RBP13.99□□□□□ -0.17
Smarcc2-203ENSMUST00000105235 Kif15Q6P9L6 1387 aa13.97□□□□□ -0.17
Smarcc2-203ENSMUST00000105235 Rtl5Q5DTT4 599 aa13.94□□□□□ -0.18
Smarcc2-203ENSMUST00000105235 Dnajc5bQ9CQ94 199 aa13.93□□□□□ -0.18
Smarcc2-203ENSMUST00000105235 Npm1Q61937 292 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 258.4 ms