RNA–Protein interactions for RNA: ENSMUST00000103664.5

Trav5-4-201, Transcript of T cell receptor alpha variable 5-4 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav5-4, Length 343 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4-201ENSMUST00000103664 Gm35339A0A140LHH9 1649 aa18.29■□□□□ 0.52
Trav5-4-201ENSMUST00000103664 NischQ80TM9 1593 aa18.04■□□□□ 0.48
Trav5-4-201ENSMUST00000103664 Abcc9P70170 1546 aa17.5■□□□□ 0.39
Trav5-4-201ENSMUST00000103664 Abcc8B2RUS7 1588 aa17.44■□□□□ 0.38
Trav5-4-201ENSMUST00000103664 Chic1Q8CBW7 227 aa17.16■□□□□ 0.34
Trav5-4-201ENSMUST00000103664 ScribQ80U72 1612 aa16.65■□□□□ 0.26
Trav5-4-201ENSMUST00000103664 Dnajc5bQ9CQ94 199 aa16.33■□□□□ 0.2
Trav5-4-201ENSMUST00000103664 NacadQ5SWP3 1504 aa16.26■□□□□ 0.19
Trav5-4-201ENSMUST00000103664 Dcaf1Q80TR8 1506 aa16.24■□□□□ 0.19
Trav5-4-201ENSMUST00000103664 Kdm5dQ62240 1548 aa16.15■□□□□ 0.18
Trav5-4-201ENSMUST00000103664 Mapk8ip2Q9ERE9 830 aa16■□□□□ 0.15
Trav5-4-201ENSMUST00000103664 Sycp2Q9CUU3 1500 aa15.91■□□□□ 0.14
Trav5-4-201ENSMUST00000103664 Rb1cc1Q9ESK9 1588 aa15.7■□□□□ 0.1
Trav5-4-201ENSMUST00000103664 Ccdc180J3QNE4 1664 aa15.69■□□□□ 0.1
Trav5-4-201ENSMUST00000103664 Crybg2B7ZCC2 1516 aa15.66■□□□□ 0.1
Trav5-4-201ENSMUST00000103664 Dnajc5P60904 198 aa15.6■□□□□ 0.09
Trav5-4-201ENSMUST00000103664 BicraF8VPZ9 1578 aa15.6■□□□□ 0.09
Trav5-4-201ENSMUST00000103664 Rhox8Q6VSS7 320 aa15.57■□□□□ 0.08
Trav5-4-201ENSMUST00000103664 Baz1aO88379 1555 aa15.55■□□□□ 0.08
Trav5-4-201ENSMUST00000103664 Thoc2B1AZI6 1594 aaKnown RBP15.49■□□□□ 0.07
Trav5-4-201ENSMUST00000103664 Rtl1Q7M732 1744 aa15.42■□□□□ 0.06
Trav5-4-201ENSMUST00000103664 Plppr3Q7TPB0 716 aa15.41■□□□□ 0.06
Trav5-4-201ENSMUST00000103664 Phf23Q8BSN5 401 aa15.35■□□□□ 0.05
Trav5-4-201ENSMUST00000103664 Pds5bQ4VA53 1446 aaKnown RBP15.25■□□□□ 0.03
Trav5-4-201ENSMUST00000103664 Zcchc6Q5BLK4 1491 aaKnown RBP15.2■□□□□ 0.02
Trav5-4-201ENSMUST00000103664 Cc2d2aQ8CFW7 1633 aa15.17■□□□□ 0.02
Trav5-4-201ENSMUST00000103664 Atad2bE9Q166 1460 aaKnown RBP15.13■□□□□ 0.01
Trav5-4-201ENSMUST00000103664 Smarca2Q6DIC0 1577 aa15.11■□□□□ 0.01
Trav5-4-201ENSMUST00000103664 Trim41Q5NCC3 630 aa15.08■□□□□ 0
Trav5-4-201ENSMUST00000103664 Gab3Q8BSM5 595 aa15.02■□□□□ -0
Trav5-4-201ENSMUST00000103664 Smarca4Q3TKT4 1613 aaKnown RBP14.99□□□□□ -0.01
Trav5-4-201ENSMUST00000103664 Fam135aQ6NS59 1506 aa14.96□□□□□ -0.02
Trav5-4-201ENSMUST00000103664 Ercc6F8VPZ5 1481 aa14.95□□□□□ -0.02
Trav5-4-201ENSMUST00000103664 Cecr2E9Q2Z1 1453 aa14.91□□□□□ -0.02
Trav5-4-201ENSMUST00000103664 Iqgap2Q3UQ44 1575 aa14.87□□□□□ -0.03
Trav5-4-201ENSMUST00000103664 Baz1bQ9Z277 1479 aa14.81□□□□□ -0.04
Trav5-4-201ENSMUST00000103664 Brd4Q9ESU6 1400 aaKnown RBP14.75□□□□□ -0.05
Trav5-4-201ENSMUST00000103664 Wdr62Q3U3T8 1523 aa14.75□□□□□ -0.05
Trav5-4-201ENSMUST00000103664 Frmpd1A2AKB4 1549 aa14.71□□□□□ -0.05
Trav5-4-201ENSMUST00000103664 CftrP26361 1476 aa14.7□□□□□ -0.06
Trav5-4-201ENSMUST00000103664 Phldb1Q6PDH0 1371 aaKnown RBP14.68□□□□□ -0.06
Trav5-4-201ENSMUST00000103664 Cttnbp2B9EJA2 1648 aa14.66□□□□□ -0.06
Trav5-4-201ENSMUST00000103664 Mrc2Q64449 1479 aa14.61□□□□□ -0.07
Trav5-4-201ENSMUST00000103664 Synj1Q8CHC4 1574 aa14.58□□□□□ -0.08
Trav5-4-201ENSMUST00000103664 Ccdc136Q3TVA9 1136 aa14.54□□□□□ -0.08
Trav5-4-201ENSMUST00000103664 Ubl4bQ9CQ84 188 aa14.49□□□□□ -0.09
Trav5-4-201ENSMUST00000103664 Shroom2A2ALU4 1481 aa14.44□□□□□ -0.1
Trav5-4-201ENSMUST00000103664 Col17a1Q07563 1470 aa14.4□□□□□ -0.1
Trav5-4-201ENSMUST00000103664 Unc13aQ4KUS2 1712 aa14.4□□□□□ -0.1
Trav5-4-201ENSMUST00000103664 Kcna4Q61423 654 aa14.36□□□□□ -0.11
Trav5-4-201ENSMUST00000103664 Senp3Q9EP97 568 aaKnown RBP14.36□□□□□ -0.11
Trav5-4-201ENSMUST00000103664 Lrriq1Q0P5X1 1673 aa14.35□□□□□ -0.11
Trav5-4-201ENSMUST00000103664 Esf1Q3V1V3 845 aaKnown RBP14.34□□□□□ -0.11
Trav5-4-201ENSMUST00000103664 Rsf1E9PWW9 1441 aaKnown RBP14.32□□□□□ -0.12
Trav5-4-201ENSMUST00000103664 Lamc3Q9R0B6 1581 aa14.25□□□□□ -0.13
Trav5-4-201ENSMUST00000103664 HrcG5E8J6 738 aa14.23□□□□□ -0.13
Trav5-4-201ENSMUST00000103664 Golga3P55937 1487 aa14.23□□□□□ -0.13
Trav5-4-201ENSMUST00000103664 Kif15Q6P9L6 1387 aa14.21□□□□□ -0.14
Trav5-4-201ENSMUST00000103664 Cux2P70298 1426 aa14.18□□□□□ -0.14
Trav5-4-201ENSMUST00000103664 Top2bQ64511 1612 aa14.17□□□□□ -0.14
Trav5-4-201ENSMUST00000103664 Eif4g3Q80XI3 1579 aaKnown RBP14.14□□□□□ -0.15
Trav5-4-201ENSMUST00000103664 TnnQ80Z71 1560 aa14.12□□□□□ -0.15
Trav5-4-201ENSMUST00000103664 Pcdh10E9PXQ7 1057 aa14.1□□□□□ -0.15
Trav5-4-201ENSMUST00000103664 Pabpn1Q8CCS6 302 aaKnown RBP14.07□□□□□ -0.16
Trav5-4-201ENSMUST00000103664 Fmn1Q05860 1466 aa14.06□□□□□ -0.16
Trav5-4-201ENSMUST00000103664 Npm1Q61937 292 aaKnown RBP14.06□□□□□ -0.16
Trav5-4-201ENSMUST00000103664 Cep164Q5DU05 1446 aa14.06□□□□□ -0.16
Trav5-4-201ENSMUST00000103664 Ccdc18Q640L5 1455 aa14.06□□□□□ -0.16
Trav5-4-201ENSMUST00000103664 Zcchc11B2RX14 1644 aaKnown RBP14.03□□□□□ -0.16
Trav5-4-201ENSMUST00000103664 Kif21aQ9QXL2 1672 aa14.02□□□□□ -0.16
Trav5-4-201ENSMUST00000103664 Cngb1E1AZ71 1325 aa13.99□□□□□ -0.17
Trav5-4-201ENSMUST00000103664 Arhgef5E9Q7D5 1581 aa13.98□□□□□ -0.17
Trav5-4-201ENSMUST00000103664 Camsap1A2AHC3 1581 aa13.96□□□□□ -0.17
Trav5-4-201ENSMUST00000103664 LrpprcQ6PB66 1392 aaKnown RBP13.96□□□□□ -0.18
Trav5-4-201ENSMUST00000103664 Pelp1Q9DBD5 1123 aaKnown RBP13.95□□□□□ -0.18
Trav5-4-201ENSMUST00000103664 Dhx29Q6PGC1 1365 aaKnown RBP13.9□□□□□ -0.18
Trav5-4-201ENSMUST00000103664 PogzQ8BZH4 1409 aaKnown RBP13.87□□□□□ -0.19
Trav5-4-201ENSMUST00000103664 Crocc2F6XLV1 1638 aa13.82□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Efcab5A0JP43 1406 aa13.81□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Grin2bQ01097 1482 aa13.81□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Urb2E9Q7L1 1524 aaKnown RBP13.81□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Il27Q8K3I6 234 aa13.8□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Plb1Q3TTY0 1478 aa13.8□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Ttbk1Q6PCN3 1308 aa13.79□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Ift140E9PY46 1464 aa13.79□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Duox2A2AQ99 1517 aa13.79□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Top2aQ01320 1528 aaKnown RBP13.79□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 Ccdc88bQ4QRL3 1481 aa13.78□□□□□ -0.2
Trav5-4-201ENSMUST00000103664 NrkQ9R0G8 1455 aa13.76□□□□□ -0.21
Trav5-4-201ENSMUST00000103664 Adgrl3Q80TS3 1537 aa13.74□□□□□ -0.21
Trav5-4-201ENSMUST00000103664 Rpgrip1Q9EPQ2 1331 aa13.69□□□□□ -0.22
Trav5-4-201ENSMUST00000103664 Rusc2Q80U22 1514 aa13.69□□□□□ -0.22
Trav5-4-201ENSMUST00000103664 Plekhg3Q4VAC9 1341 aa13.66□□□□□ -0.22
Trav5-4-201ENSMUST00000103664 Disp1Q3TDN0 1521 aa13.65□□□□□ -0.22
Trav5-4-201ENSMUST00000103664 Pbrm1Q8BSQ9 1634 aaKnown RBP13.65□□□□□ -0.22
Trav5-4-201ENSMUST00000103664 Cc2d2bA0A286YDU8 1405 aa13.64□□□□□ -0.23
Trav5-4-201ENSMUST00000103664 Nup160Q9Z0W3 1402 aaKnown RBP13.64□□□□□ -0.23
Trav5-4-201ENSMUST00000103664 Shroom4Q1W617 1475 aa13.63□□□□□ -0.23
Trav5-4-201ENSMUST00000103664 PtprtQ99M80 1454 aa13.63□□□□□ -0.23
Trav5-4-201ENSMUST00000103664 Samd9lQ69Z37 1561 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms