RNA–Protein interactions for RNA: ENSMUST00000103658.3

Trav13-2-201, Transcript of T cell receptor alpha variable 13-2 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13-2, Length 390 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2-201ENSMUST00000103658 Gm35339A0A140LHH9 1649 aa23.74■■□□□ 1.39
Trav13-2-201ENSMUST00000103658 NischQ80TM9 1593 aa23.23■■□□□ 1.31
Trav13-2-201ENSMUST00000103658 Abcc8B2RUS7 1588 aa22.55■■□□□ 1.2
Trav13-2-201ENSMUST00000103658 Abcc9P70170 1546 aa22.47■■□□□ 1.19
Trav13-2-201ENSMUST00000103658 ScribQ80U72 1612 aa22.02■■□□□ 1.12
Trav13-2-201ENSMUST00000103658 NacadQ5SWP3 1504 aa21.21■□□□□ 0.99
Trav13-2-201ENSMUST00000103658 Kdm5dQ62240 1548 aa21.19■□□□□ 0.98
Trav13-2-201ENSMUST00000103658 Sycp2Q9CUU3 1500 aa20.82■□□□□ 0.92
Trav13-2-201ENSMUST00000103658 Dcaf1Q80TR8 1506 aa20.67■□□□□ 0.9
Trav13-2-201ENSMUST00000103658 BicraF8VPZ9 1578 aa20.63■□□□□ 0.89
Trav13-2-201ENSMUST00000103658 Dnajc5bQ9CQ94 199 aa20.55■□□□□ 0.88
Trav13-2-201ENSMUST00000103658 Rb1cc1Q9ESK9 1588 aa20.25■□□□□ 0.83
Trav13-2-201ENSMUST00000103658 Thoc2B1AZI6 1594 aaKnown RBP20.11■□□□□ 0.81
Trav13-2-201ENSMUST00000103658 Pds5bQ4VA53 1446 aaKnown RBP20.06■□□□□ 0.8
Trav13-2-201ENSMUST00000103658 Baz1aO88379 1555 aa19.91■□□□□ 0.78
Trav13-2-201ENSMUST00000103658 Ccdc180J3QNE4 1664 aa19.87■□□□□ 0.77
Trav13-2-201ENSMUST00000103658 Crybg2B7ZCC2 1516 aa19.81■□□□□ 0.76
Trav13-2-201ENSMUST00000103658 Atad2bE9Q166 1460 aaKnown RBP19.79■□□□□ 0.76
Trav13-2-201ENSMUST00000103658 Cc2d2aQ8CFW7 1633 aa19.77■□□□□ 0.76
Trav13-2-201ENSMUST00000103658 Ercc6F8VPZ5 1481 aa19.67■□□□□ 0.74
Trav13-2-201ENSMUST00000103658 Zcchc6Q5BLK4 1491 aaKnown RBP19.67■□□□□ 0.74
Trav13-2-201ENSMUST00000103658 Rhox8Q6VSS7 320 aa19.67■□□□□ 0.74
Trav13-2-201ENSMUST00000103658 Smarca2Q6DIC0 1577 aa19.58■□□□□ 0.73
Trav13-2-201ENSMUST00000103658 Fam135aQ6NS59 1506 aa19.55■□□□□ 0.72
Trav13-2-201ENSMUST00000103658 Smarca4Q3TKT4 1613 aaKnown RBP19.54■□□□□ 0.72
Trav13-2-201ENSMUST00000103658 Iqgap2Q3UQ44 1575 aa19.5■□□□□ 0.71
Trav13-2-201ENSMUST00000103658 Wdr62Q3U3T8 1523 aa19.38■□□□□ 0.69
Trav13-2-201ENSMUST00000103658 Cecr2E9Q2Z1 1453 aa19.36■□□□□ 0.69
Trav13-2-201ENSMUST00000103658 Frmpd1A2AKB4 1549 aa19.34■□□□□ 0.69
Trav13-2-201ENSMUST00000103658 Phldb1Q6PDH0 1371 aaKnown RBP19.27■□□□□ 0.68
Trav13-2-201ENSMUST00000103658 Baz1bQ9Z277 1479 aa19.24■□□□□ 0.67
Trav13-2-201ENSMUST00000103658 Unc13aQ4KUS2 1712 aa19.2■□□□□ 0.66
Trav13-2-201ENSMUST00000103658 Ubl4bQ9CQ84 188 aa19.11■□□□□ 0.65
Trav13-2-201ENSMUST00000103658 Mrc2Q64449 1479 aa19.08■□□□□ 0.64
Trav13-2-201ENSMUST00000103658 Dnajc5P60904 198 aa18.93■□□□□ 0.62
Trav13-2-201ENSMUST00000103658 Cttnbp2B9EJA2 1648 aa18.89■□□□□ 0.62
Trav13-2-201ENSMUST00000103658 Trim41Q5NCC3 630 aa18.86■□□□□ 0.61
Trav13-2-201ENSMUST00000103658 CftrP26361 1476 aa18.84■□□□□ 0.61
Trav13-2-201ENSMUST00000103658 Synj1Q8CHC4 1574 aa18.81■□□□□ 0.6
Trav13-2-201ENSMUST00000103658 Rtl1Q7M732 1744 aa18.79■□□□□ 0.6
Trav13-2-201ENSMUST00000103658 Lrriq1Q0P5X1 1673 aa18.76■□□□□ 0.59
Trav13-2-201ENSMUST00000103658 Brd4Q9ESU6 1400 aaKnown RBP18.67■□□□□ 0.58
Trav13-2-201ENSMUST00000103658 Kif21aQ9QXL2 1672 aa18.62■□□□□ 0.57
Trav13-2-201ENSMUST00000103658 Rsf1E9PWW9 1441 aaKnown RBP18.58■□□□□ 0.57
Trav13-2-201ENSMUST00000103658 Cux2P70298 1426 aa18.57■□□□□ 0.56
Trav13-2-201ENSMUST00000103658 Kif15Q6P9L6 1387 aa18.51■□□□□ 0.55
Trav13-2-201ENSMUST00000103658 Ccdc136Q3TVA9 1136 aa18.48■□□□□ 0.55
Trav13-2-201ENSMUST00000103658 Eif4g3Q80XI3 1579 aaKnown RBP18.47■□□□□ 0.55
Trav13-2-201ENSMUST00000103658 Esf1Q3V1V3 845 aaKnown RBP18.47■□□□□ 0.55
Trav13-2-201ENSMUST00000103658 Lamc3Q9R0B6 1581 aa18.4■□□□□ 0.54
Trav13-2-201ENSMUST00000103658 Shroom2A2ALU4 1481 aa18.39■□□□□ 0.53
Trav13-2-201ENSMUST00000103658 Npm1Q61937 292 aaKnown RBP18.33■□□□□ 0.52
Trav13-2-201ENSMUST00000103658 Cep164Q5DU05 1446 aa18.26■□□□□ 0.51
Trav13-2-201ENSMUST00000103658 Urb2E9Q7L1 1524 aaKnown RBP18.24■□□□□ 0.51
Trav13-2-201ENSMUST00000103658 Col17a1Q07563 1470 aa18.21■□□□□ 0.51
Trav13-2-201ENSMUST00000103658 Plb1Q3TTY0 1478 aa18.18■□□□□ 0.5
Trav13-2-201ENSMUST00000103658 Top2bQ64511 1612 aa18.16■□□□□ 0.5
Trav13-2-201ENSMUST00000103658 Dhx29Q6PGC1 1365 aaKnown RBP18.16■□□□□ 0.5
Trav13-2-201ENSMUST00000103658 Crocc2F6XLV1 1638 aa18.13■□□□□ 0.49
Trav13-2-201ENSMUST00000103658 Ccdc18Q640L5 1455 aa18.11■□□□□ 0.49
Trav13-2-201ENSMUST00000103658 TnnQ80Z71 1560 aa18.1■□□□□ 0.49
Trav13-2-201ENSMUST00000103658 Pabpn1Q8CCS6 302 aaKnown RBP18.1■□□□□ 0.49
Trav13-2-201ENSMUST00000103658 Il27Q8K3I6 234 aa18.09■□□□□ 0.49
Trav13-2-201ENSMUST00000103658 Camsap1A2AHC3 1581 aa18.05■□□□□ 0.48
Trav13-2-201ENSMUST00000103658 Rusc2Q80U22 1514 aa18.05■□□□□ 0.48
Trav13-2-201ENSMUST00000103658 LrpprcQ6PB66 1392 aaKnown RBP18.04■□□□□ 0.48
Trav13-2-201ENSMUST00000103658 Pelp1Q9DBD5 1123 aaKnown RBP18■□□□□ 0.47
Trav13-2-201ENSMUST00000103658 Ift140E9PY46 1464 aa17.99■□□□□ 0.47
Trav13-2-201ENSMUST00000103658 Zcchc11B2RX14 1644 aaKnown RBP17.96■□□□□ 0.47
Trav13-2-201ENSMUST00000103658 PogzQ8BZH4 1409 aaKnown RBP17.93■□□□□ 0.46
Trav13-2-201ENSMUST00000103658 Golga3P55937 1487 aa17.88■□□□□ 0.45
Trav13-2-201ENSMUST00000103658 Setd1bQ8CFT2 1985 aa17.88■□□□□ 0.45
Trav13-2-201ENSMUST00000103658 Duox2A2AQ99 1517 aa17.84■□□□□ 0.45
Trav13-2-201ENSMUST00000103658 Cngb1E1AZ71 1325 aa17.84■□□□□ 0.45
Trav13-2-201ENSMUST00000103658 Disp1Q3TDN0 1521 aa17.81■□□□□ 0.44
Trav13-2-201ENSMUST00000103658 Pbrm1Q8BSQ9 1634 aaKnown RBP17.8■□□□□ 0.44
Trav13-2-201ENSMUST00000103658 Fmn1Q05860 1466 aa17.77■□□□□ 0.44
Trav13-2-201ENSMUST00000103658 Samd9lQ69Z37 1561 aa17.76■□□□□ 0.43
Trav13-2-201ENSMUST00000103658 Grin2bQ01097 1482 aa17.74■□□□□ 0.43
Trav13-2-201ENSMUST00000103658 Nup160Q9Z0W3 1402 aaKnown RBP17.73■□□□□ 0.43
Trav13-2-201ENSMUST00000103658 Arhgef5E9Q7D5 1581 aa17.72■□□□□ 0.43
Trav13-2-201ENSMUST00000103658 Cc2d2bA0A286YDU8 1405 aa17.72■□□□□ 0.43
Trav13-2-201ENSMUST00000103658 Adgrl3Q80TS3 1537 aa17.71■□□□□ 0.43
Trav13-2-201ENSMUST00000103658 Pcdh10E9PXQ7 1057 aa17.68■□□□□ 0.42
Trav13-2-201ENSMUST00000103658 Cep170Q6A065 1588 aa17.66■□□□□ 0.42
Trav13-2-201ENSMUST00000103658 PtprkP35822 1457 aa17.64■□□□□ 0.41
Trav13-2-201ENSMUST00000103658 Ttbk1Q6PCN3 1308 aa17.63■□□□□ 0.41
Trav13-2-201ENSMUST00000103658 Gapvd1Q6PAR5 1458 aa17.61■□□□□ 0.41
Trav13-2-201ENSMUST00000103658 AqrQ8CFQ3 1481 aaKnown RBP17.61■□□□□ 0.41
Trav13-2-201ENSMUST00000103658 Rad54l2Q99NG0 1466 aa17.61■□□□□ 0.41
Trav13-2-201ENSMUST00000103658 Grin2aP35436 1464 aa17.6■□□□□ 0.41
Trav13-2-201ENSMUST00000103658 Efcab5A0JP43 1406 aa17.59■□□□□ 0.41
Trav13-2-201ENSMUST00000103658 Fgd6Q69ZL1 1399 aa17.58■□□□□ 0.4
Trav13-2-201ENSMUST00000103658 Magi3Q9EQJ9 1476 aa17.57■□□□□ 0.4
Trav13-2-201ENSMUST00000103658 PtprtQ99M80 1454 aa17.56■□□□□ 0.4
Trav13-2-201ENSMUST00000103658 Gm156Q58A37 223 aa17.55■□□□□ 0.4
Trav13-2-201ENSMUST00000103658 AknaQ80VW7 1404 aa17.5■□□□□ 0.39
Trav13-2-201ENSMUST00000103658 Abcc1O35379 1528 aa17.5■□□□□ 0.39
Trav13-2-201ENSMUST00000103658 Chd1P40201 1711 aa17.49■□□□□ 0.39
Trav13-2-201ENSMUST00000103658 Pprc1Q6NZN1 1644 aa17.46■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 68.9 ms