RNA–Protein interactions for RNA: ENSMUST00000103657.5

Trav12-3-201, Transcript of T cell receptor alpha variable 12-3 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav12-3, Length 442 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3-201ENSMUST00000103657 Gm35339A0A140LHH9 1649 aa24.61■■□□□ 1.53
Trav12-3-201ENSMUST00000103657 NischQ80TM9 1593 aa24.25■■□□□ 1.47
Trav12-3-201ENSMUST00000103657 Abcc8B2RUS7 1588 aa23.48■■□□□ 1.35
Trav12-3-201ENSMUST00000103657 Abcc9P70170 1546 aa23.42■■□□□ 1.34
Trav12-3-201ENSMUST00000103657 ScribQ80U72 1612 aa22.75■■□□□ 1.23
Trav12-3-201ENSMUST00000103657 NacadQ5SWP3 1504 aa22.05■■□□□ 1.12
Trav12-3-201ENSMUST00000103657 Kdm5dQ62240 1548 aa21.98■■□□□ 1.11
Trav12-3-201ENSMUST00000103657 Sycp2Q9CUU3 1500 aa21.61■■□□□ 1.05
Trav12-3-201ENSMUST00000103657 Dcaf1Q80TR8 1506 aa21.54■■□□□ 1.04
Trav12-3-201ENSMUST00000103657 BicraF8VPZ9 1578 aa21.33■■□□□ 1.01
Trav12-3-201ENSMUST00000103657 Rb1cc1Q9ESK9 1588 aa21.13■□□□□ 0.97
Trav12-3-201ENSMUST00000103657 Dnajc5bQ9CQ94 199 aa21.08■□□□□ 0.97
Trav12-3-201ENSMUST00000103657 Rhox8Q6VSS7 320 aa20.83■□□□□ 0.93
Trav12-3-201ENSMUST00000103657 Pds5bQ4VA53 1446 aaKnown RBP20.83■□□□□ 0.93
Trav12-3-201ENSMUST00000103657 Baz1aO88379 1555 aa20.8■□□□□ 0.92
Trav12-3-201ENSMUST00000103657 Ccdc180J3QNE4 1664 aa20.73■□□□□ 0.91
Trav12-3-201ENSMUST00000103657 Crybg2B7ZCC2 1516 aa20.73■□□□□ 0.91
Trav12-3-201ENSMUST00000103657 Thoc2B1AZI6 1594 aaKnown RBP20.7■□□□□ 0.9
Trav12-3-201ENSMUST00000103657 Zcchc6Q5BLK4 1491 aaKnown RBP20.58■□□□□ 0.89
Trav12-3-201ENSMUST00000103657 Atad2bE9Q166 1460 aaKnown RBP20.57■□□□□ 0.88
Trav12-3-201ENSMUST00000103657 Ercc6F8VPZ5 1481 aa20.42■□□□□ 0.86
Trav12-3-201ENSMUST00000103657 Cc2d2aQ8CFW7 1633 aa20.38■□□□□ 0.85
Trav12-3-201ENSMUST00000103657 Smarca4Q3TKT4 1613 aaKnown RBP20.33■□□□□ 0.84
Trav12-3-201ENSMUST00000103657 Smarca2Q6DIC0 1577 aa20.32■□□□□ 0.84
Trav12-3-201ENSMUST00000103657 Iqgap2Q3UQ44 1575 aa20.25■□□□□ 0.83
Trav12-3-201ENSMUST00000103657 Fam135aQ6NS59 1506 aa20.2■□□□□ 0.82
Trav12-3-201ENSMUST00000103657 Cecr2E9Q2Z1 1453 aa20.18■□□□□ 0.82
Trav12-3-201ENSMUST00000103657 Wdr62Q3U3T8 1523 aa20.1■□□□□ 0.81
Trav12-3-201ENSMUST00000103657 Frmpd1A2AKB4 1549 aa20.06■□□□□ 0.8
Trav12-3-201ENSMUST00000103657 Phldb1Q6PDH0 1371 aaKnown RBP20.04■□□□□ 0.8
Trav12-3-201ENSMUST00000103657 Baz1bQ9Z277 1479 aa19.98■□□□□ 0.79
Trav12-3-201ENSMUST00000103657 Ubl4bQ9CQ84 188 aa19.89■□□□□ 0.77
Trav12-3-201ENSMUST00000103657 Unc13aQ4KUS2 1712 aa19.77■□□□□ 0.76
Trav12-3-201ENSMUST00000103657 Mrc2Q64449 1479 aa19.75■□□□□ 0.75
Trav12-3-201ENSMUST00000103657 CftrP26361 1476 aa19.7■□□□□ 0.74
Trav12-3-201ENSMUST00000103657 Rtl1Q7M732 1744 aa19.7■□□□□ 0.74
Trav12-3-201ENSMUST00000103657 Cttnbp2B9EJA2 1648 aa19.69■□□□□ 0.74
Trav12-3-201ENSMUST00000103657 Synj1Q8CHC4 1574 aa19.63■□□□□ 0.73
Trav12-3-201ENSMUST00000103657 Brd4Q9ESU6 1400 aaKnown RBP19.62■□□□□ 0.73
Trav12-3-201ENSMUST00000103657 Ccdc136Q3TVA9 1136 aa19.51■□□□□ 0.71
Trav12-3-201ENSMUST00000103657 Esf1Q3V1V3 845 aaKnown RBP19.43■□□□□ 0.7
Trav12-3-201ENSMUST00000103657 Trim41Q5NCC3 630 aa19.39■□□□□ 0.69
Trav12-3-201ENSMUST00000103657 Rsf1E9PWW9 1441 aaKnown RBP19.35■□□□□ 0.69
Trav12-3-201ENSMUST00000103657 Cux2P70298 1426 aa19.34■□□□□ 0.69
Trav12-3-201ENSMUST00000103657 Kif15Q6P9L6 1387 aa19.33■□□□□ 0.69
Trav12-3-201ENSMUST00000103657 Lrriq1Q0P5X1 1673 aa19.33■□□□□ 0.68
Trav12-3-201ENSMUST00000103657 Dnajc5P60904 198 aa19.32■□□□□ 0.68
Trav12-3-201ENSMUST00000103657 Kif21aQ9QXL2 1672 aa19.23■□□□□ 0.67
Trav12-3-201ENSMUST00000103657 Npm1Q61937 292 aaKnown RBP19.17■□□□□ 0.66
Trav12-3-201ENSMUST00000103657 Lamc3Q9R0B6 1581 aa19.16■□□□□ 0.66
Trav12-3-201ENSMUST00000103657 Cep164Q5DU05 1446 aa19.07■□□□□ 0.64
Trav12-3-201ENSMUST00000103657 Eif4g3Q80XI3 1579 aaKnown RBP19.06■□□□□ 0.64
Trav12-3-201ENSMUST00000103657 Ccdc18Q640L5 1455 aa18.95■□□□□ 0.62
Trav12-3-201ENSMUST00000103657 Il27Q8K3I6 234 aa18.94■□□□□ 0.62
Trav12-3-201ENSMUST00000103657 Shroom2A2ALU4 1481 aa18.94■□□□□ 0.62
Trav12-3-201ENSMUST00000103657 Urb2E9Q7L1 1524 aaKnown RBP18.93■□□□□ 0.62
Trav12-3-201ENSMUST00000103657 Dhx29Q6PGC1 1365 aaKnown RBP18.93■□□□□ 0.62
Trav12-3-201ENSMUST00000103657 Plb1Q3TTY0 1478 aa18.89■□□□□ 0.61
Trav12-3-201ENSMUST00000103657 TnnQ80Z71 1560 aa18.87■□□□□ 0.61
Trav12-3-201ENSMUST00000103657 LrpprcQ6PB66 1392 aaKnown RBP18.85■□□□□ 0.61
Trav12-3-201ENSMUST00000103657 Golga3P55937 1487 aa18.84■□□□□ 0.61
Trav12-3-201ENSMUST00000103657 Cngb1E1AZ71 1325 aa18.83■□□□□ 0.61
Trav12-3-201ENSMUST00000103657 Crocc2F6XLV1 1638 aa18.83■□□□□ 0.61
Trav12-3-201ENSMUST00000103657 Top2bQ64511 1612 aa18.82■□□□□ 0.6
Trav12-3-201ENSMUST00000103657 Camsap1A2AHC3 1581 aa18.81■□□□□ 0.6
Trav12-3-201ENSMUST00000103657 Pabpn1Q8CCS6 302 aaKnown RBP18.76■□□□□ 0.59
Trav12-3-201ENSMUST00000103657 Ift140E9PY46 1464 aa18.72■□□□□ 0.59
Trav12-3-201ENSMUST00000103657 Col17a1Q07563 1470 aa18.71■□□□□ 0.59
Trav12-3-201ENSMUST00000103657 PogzQ8BZH4 1409 aaKnown RBP18.71■□□□□ 0.59
Trav12-3-201ENSMUST00000103657 Rusc2Q80U22 1514 aa18.69■□□□□ 0.58
Trav12-3-201ENSMUST00000103657 Fmn1Q05860 1466 aa18.67■□□□□ 0.58
Trav12-3-201ENSMUST00000103657 Pelp1Q9DBD5 1123 aaKnown RBP18.66■□□□□ 0.58
Trav12-3-201ENSMUST00000103657 Duox2A2AQ99 1517 aa18.63■□□□□ 0.57
Trav12-3-201ENSMUST00000103657 Disp1Q3TDN0 1521 aa18.54■□□□□ 0.56
Trav12-3-201ENSMUST00000103657 Grin2bQ01097 1482 aa18.53■□□□□ 0.56
Trav12-3-201ENSMUST00000103657 Zcchc11B2RX14 1644 aaKnown RBP18.49■□□□□ 0.55
Trav12-3-201ENSMUST00000103657 Pbrm1Q8BSQ9 1634 aaKnown RBP18.47■□□□□ 0.55
Trav12-3-201ENSMUST00000103657 Cc2d2bA0A286YDU8 1405 aa18.47■□□□□ 0.55
Trav12-3-201ENSMUST00000103657 Samd9lQ69Z37 1561 aa18.47■□□□□ 0.55
Trav12-3-201ENSMUST00000103657 Nup160Q9Z0W3 1402 aaKnown RBP18.46■□□□□ 0.55
Trav12-3-201ENSMUST00000103657 Setd1bQ8CFT2 1985 aa18.44■□□□□ 0.54
Trav12-3-201ENSMUST00000103657 Efcab5A0JP43 1406 aa18.43■□□□□ 0.54
Trav12-3-201ENSMUST00000103657 Rad54l2Q99NG0 1466 aa18.36■□□□□ 0.53
Trav12-3-201ENSMUST00000103657 Grin2aP35436 1464 aa18.33■□□□□ 0.52
Trav12-3-201ENSMUST00000103657 AqrQ8CFQ3 1481 aaKnown RBP18.33■□□□□ 0.52
Trav12-3-201ENSMUST00000103657 Fgd6Q69ZL1 1399 aa18.32■□□□□ 0.52
Trav12-3-201ENSMUST00000103657 Adgrl3Q80TS3 1537 aa18.29■□□□□ 0.52
Trav12-3-201ENSMUST00000103657 Magi3Q9EQJ9 1476 aa18.29■□□□□ 0.52
Trav12-3-201ENSMUST00000103657 PtprkP35822 1457 aa18.27■□□□□ 0.52
Trav12-3-201ENSMUST00000103657 NrkQ9R0G8 1455 aa18.27■□□□□ 0.52
Trav12-3-201ENSMUST00000103657 Ccdc88bQ4QRL3 1481 aa18.26■□□□□ 0.51
Trav12-3-201ENSMUST00000103657 Ttbk1Q6PCN3 1308 aa18.25■□□□□ 0.51
Trav12-3-201ENSMUST00000103657 Top2aQ01320 1528 aaKnown RBP18.24■□□□□ 0.51
Trav12-3-201ENSMUST00000103657 Gapvd1Q6PAR5 1458 aa18.24■□□□□ 0.51
Trav12-3-201ENSMUST00000103657 Cep170Q6A065 1588 aa18.24■□□□□ 0.51
Trav12-3-201ENSMUST00000103657 Arhgef5E9Q7D5 1581 aa18.22■□□□□ 0.51
Trav12-3-201ENSMUST00000103657 AknaQ80VW7 1404 aa18.21■□□□□ 0.51
Trav12-3-201ENSMUST00000103657 Gm156Q58A37 223 aa18.19■□□□□ 0.5
Trav12-3-201ENSMUST00000103657 Shroom4Q1W617 1475 aa18.19■□□□□ 0.5
Trav12-3-201ENSMUST00000103657 Pla2r1Q62028 1487 aa18.17■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms