RNA–Protein interactions for RNA: ENSMUST00000103651.3

Trav13-1-201, Transcript of T cell receptor alpha variable 13-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13-1, Length 331 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1-201ENSMUST00000103651 Gm35339A0A140LHH9 1649 aa27.54■■■□□ 2
Trav13-1-201ENSMUST00000103651 NischQ80TM9 1593 aa27.11■■□□□ 1.93
Trav13-1-201ENSMUST00000103651 Abcc8B2RUS7 1588 aa26.33■■□□□ 1.81
Trav13-1-201ENSMUST00000103651 Abcc9P70170 1546 aa26.21■■□□□ 1.79
Trav13-1-201ENSMUST00000103651 ScribQ80U72 1612 aa25.59■■□□□ 1.69
Trav13-1-201ENSMUST00000103651 NacadQ5SWP3 1504 aa24.76■■□□□ 1.55
Trav13-1-201ENSMUST00000103651 Kdm5dQ62240 1548 aa24.67■■□□□ 1.54
Trav13-1-201ENSMUST00000103651 Sycp2Q9CUU3 1500 aa24.3■■□□□ 1.48
Trav13-1-201ENSMUST00000103651 Dcaf1Q80TR8 1506 aa24.09■■□□□ 1.45
Trav13-1-201ENSMUST00000103651 Dnajc5bQ9CQ94 199 aa24.06■■□□□ 1.44
Trav13-1-201ENSMUST00000103651 BicraF8VPZ9 1578 aa24.02■■□□□ 1.44
Trav13-1-201ENSMUST00000103651 Rb1cc1Q9ESK9 1588 aa23.57■■□□□ 1.36
Trav13-1-201ENSMUST00000103651 Pds5bQ4VA53 1446 aaKnown RBP23.44■■□□□ 1.34
Trav13-1-201ENSMUST00000103651 Thoc2B1AZI6 1594 aaKnown RBP23.33■■□□□ 1.33
Trav13-1-201ENSMUST00000103651 Baz1aO88379 1555 aa23.22■■□□□ 1.31
Trav13-1-201ENSMUST00000103651 Crybg2B7ZCC2 1516 aa23.18■■□□□ 1.3
Trav13-1-201ENSMUST00000103651 Rhox8Q6VSS7 320 aa23.18■■□□□ 1.3
Trav13-1-201ENSMUST00000103651 Atad2bE9Q166 1460 aaKnown RBP23.14■■□□□ 1.29
Trav13-1-201ENSMUST00000103651 Ccdc180J3QNE4 1664 aa23.03■■□□□ 1.28
Trav13-1-201ENSMUST00000103651 Zcchc6Q5BLK4 1491 aaKnown RBP23.01■■□□□ 1.27
Trav13-1-201ENSMUST00000103651 Cc2d2aQ8CFW7 1633 aa22.97■■□□□ 1.27
Trav13-1-201ENSMUST00000103651 Ercc6F8VPZ5 1481 aa22.92■■□□□ 1.26
Trav13-1-201ENSMUST00000103651 Smarca2Q6DIC0 1577 aa22.82■■□□□ 1.24
Trav13-1-201ENSMUST00000103651 Smarca4Q3TKT4 1613 aaKnown RBP22.76■■□□□ 1.23
Trav13-1-201ENSMUST00000103651 Fam135aQ6NS59 1506 aa22.73■■□□□ 1.23
Trav13-1-201ENSMUST00000103651 Iqgap2Q3UQ44 1575 aa22.7■■□□□ 1.22
Trav13-1-201ENSMUST00000103651 Cecr2E9Q2Z1 1453 aa22.67■■□□□ 1.22
Trav13-1-201ENSMUST00000103651 Frmpd1A2AKB4 1549 aa22.58■■□□□ 1.21
Trav13-1-201ENSMUST00000103651 Wdr62Q3U3T8 1523 aa22.57■■□□□ 1.2
Trav13-1-201ENSMUST00000103651 Phldb1Q6PDH0 1371 aaKnown RBP22.56■■□□□ 1.2
Trav13-1-201ENSMUST00000103651 Ubl4bQ9CQ84 188 aa22.44■■□□□ 1.18
Trav13-1-201ENSMUST00000103651 Baz1bQ9Z277 1479 aa22.41■■□□□ 1.18
Trav13-1-201ENSMUST00000103651 Mrc2Q64449 1479 aa22.24■■□□□ 1.15
Trav13-1-201ENSMUST00000103651 Unc13aQ4KUS2 1712 aa22.14■■□□□ 1.13
Trav13-1-201ENSMUST00000103651 Dnajc5P60904 198 aa22.11■■□□□ 1.13
Trav13-1-201ENSMUST00000103651 CftrP26361 1476 aa22.05■■□□□ 1.12
Trav13-1-201ENSMUST00000103651 Trim41Q5NCC3 630 aa22.04■■□□□ 1.12
Trav13-1-201ENSMUST00000103651 Cttnbp2B9EJA2 1648 aa21.95■■□□□ 1.1
Trav13-1-201ENSMUST00000103651 Synj1Q8CHC4 1574 aa21.95■■□□□ 1.1
Trav13-1-201ENSMUST00000103651 Brd4Q9ESU6 1400 aaKnown RBP21.88■■□□□ 1.09
Trav13-1-201ENSMUST00000103651 Ccdc136Q3TVA9 1136 aa21.79■■□□□ 1.08
Trav13-1-201ENSMUST00000103651 Cux2P70298 1426 aa21.75■■□□□ 1.07
Trav13-1-201ENSMUST00000103651 Lrriq1Q0P5X1 1673 aa21.74■■□□□ 1.07
Trav13-1-201ENSMUST00000103651 Esf1Q3V1V3 845 aaKnown RBP21.72■■□□□ 1.07
Trav13-1-201ENSMUST00000103651 Kif15Q6P9L6 1387 aa21.68■■□□□ 1.06
Trav13-1-201ENSMUST00000103651 Rsf1E9PWW9 1441 aaKnown RBP21.68■■□□□ 1.06
Trav13-1-201ENSMUST00000103651 Rtl1Q7M732 1744 aa21.66■■□□□ 1.06
Trav13-1-201ENSMUST00000103651 Kif21aQ9QXL2 1672 aa21.58■■□□□ 1.05
Trav13-1-201ENSMUST00000103651 Npm1Q61937 292 aaKnown RBP21.54■■□□□ 1.04
Trav13-1-201ENSMUST00000103651 Lamc3Q9R0B6 1581 aa21.46■■□□□ 1.03
Trav13-1-201ENSMUST00000103651 Eif4g3Q80XI3 1579 aaKnown RBP21.41■■□□□ 1.02
Trav13-1-201ENSMUST00000103651 Shroom2A2ALU4 1481 aa21.41■■□□□ 1.02
Trav13-1-201ENSMUST00000103651 Cep164Q5DU05 1446 aa21.38■■□□□ 1.01
Trav13-1-201ENSMUST00000103651 Urb2E9Q7L1 1524 aaKnown RBP21.29■■□□□ 1
Trav13-1-201ENSMUST00000103651 Plb1Q3TTY0 1478 aa21.27■■□□□ 1
Trav13-1-201ENSMUST00000103651 Dhx29Q6PGC1 1365 aaKnown RBP21.27■■□□□ 1
Trav13-1-201ENSMUST00000103651 Il27Q8K3I6 234 aa21.26■□□□□ 0.99
Trav13-1-201ENSMUST00000103651 Col17a1Q07563 1470 aa21.22■□□□□ 0.99
Trav13-1-201ENSMUST00000103651 Pabpn1Q8CCS6 302 aaKnown RBP21.22■□□□□ 0.99
Trav13-1-201ENSMUST00000103651 Ccdc18Q640L5 1455 aa21.17■□□□□ 0.98
Trav13-1-201ENSMUST00000103651 LrpprcQ6PB66 1392 aaKnown RBP21.16■□□□□ 0.98
Trav13-1-201ENSMUST00000103651 Crocc2F6XLV1 1638 aa21.08■□□□□ 0.97
Trav13-1-201ENSMUST00000103651 Top2bQ64511 1612 aa21.07■□□□□ 0.96
Trav13-1-201ENSMUST00000103651 TnnQ80Z71 1560 aa21.07■□□□□ 0.96
Trav13-1-201ENSMUST00000103651 Pelp1Q9DBD5 1123 aaKnown RBP21.06■□□□□ 0.96
Trav13-1-201ENSMUST00000103651 Camsap1A2AHC3 1581 aa21.02■□□□□ 0.96
Trav13-1-201ENSMUST00000103651 Ift140E9PY46 1464 aa21.01■□□□□ 0.95
Trav13-1-201ENSMUST00000103651 Rusc2Q80U22 1514 aa20.99■□□□□ 0.95
Trav13-1-201ENSMUST00000103651 PogzQ8BZH4 1409 aaKnown RBP20.99■□□□□ 0.95
Trav13-1-201ENSMUST00000103651 Cngb1E1AZ71 1325 aa20.99■□□□□ 0.95
Trav13-1-201ENSMUST00000103651 Golga3P55937 1487 aa20.98■□□□□ 0.95
Trav13-1-201ENSMUST00000103651 Duox2A2AQ99 1517 aa20.88■□□□□ 0.93
Trav13-1-201ENSMUST00000103651 Zcchc11B2RX14 1644 aaKnown RBP20.85■□□□□ 0.93
Trav13-1-201ENSMUST00000103651 Disp1Q3TDN0 1521 aa20.84■□□□□ 0.93
Trav13-1-201ENSMUST00000103651 Fmn1Q05860 1466 aa20.8■□□□□ 0.92
Trav13-1-201ENSMUST00000103651 Grin2bQ01097 1482 aa20.74■□□□□ 0.91
Trav13-1-201ENSMUST00000103651 Cc2d2bA0A286YDU8 1405 aa20.73■□□□□ 0.91
Trav13-1-201ENSMUST00000103651 Nup160Q9Z0W3 1402 aaKnown RBP20.73■□□□□ 0.91
Trav13-1-201ENSMUST00000103651 Pcdh10E9PXQ7 1057 aa20.68■□□□□ 0.9
Trav13-1-201ENSMUST00000103651 Samd9lQ69Z37 1561 aa20.67■□□□□ 0.9
Trav13-1-201ENSMUST00000103651 Adgrl3Q80TS3 1537 aa20.64■□□□□ 0.9
Trav13-1-201ENSMUST00000103651 Efcab5A0JP43 1406 aa20.64■□□□□ 0.89
Trav13-1-201ENSMUST00000103651 Pbrm1Q8BSQ9 1634 aaKnown RBP20.62■□□□□ 0.89
Trav13-1-201ENSMUST00000103651 PtprkP35822 1457 aa20.61■□□□□ 0.89
Trav13-1-201ENSMUST00000103651 Rad54l2Q99NG0 1466 aa20.61■□□□□ 0.89
Trav13-1-201ENSMUST00000103651 Fgd6Q69ZL1 1399 aa20.59■□□□□ 0.89
Trav13-1-201ENSMUST00000103651 Ttbk1Q6PCN3 1308 aa20.59■□□□□ 0.89
Trav13-1-201ENSMUST00000103651 Gm156Q58A37 223 aa20.59■□□□□ 0.89
Trav13-1-201ENSMUST00000103651 Setd1bQ8CFT2 1985 aa20.59■□□□□ 0.89
Trav13-1-201ENSMUST00000103651 Arhgef5E9Q7D5 1581 aa20.57■□□□□ 0.88
Trav13-1-201ENSMUST00000103651 AqrQ8CFQ3 1481 aaKnown RBP20.56■□□□□ 0.88
Trav13-1-201ENSMUST00000103651 Grin2aP35436 1464 aa20.55■□□□□ 0.88
Trav13-1-201ENSMUST00000103651 Gapvd1Q6PAR5 1458 aa20.54■□□□□ 0.88
Trav13-1-201ENSMUST00000103651 Cep170Q6A065 1588 aa20.53■□□□□ 0.88
Trav13-1-201ENSMUST00000103651 Magi3Q9EQJ9 1476 aa20.52■□□□□ 0.88
Trav13-1-201ENSMUST00000103651 PtprtQ99M80 1454 aa20.49■□□□□ 0.87
Trav13-1-201ENSMUST00000103651 AknaQ80VW7 1404 aa20.45■□□□□ 0.86
Trav13-1-201ENSMUST00000103651 Abcc1O35379 1528 aa20.4■□□□□ 0.86
Trav13-1-201ENSMUST00000103651 NrkQ9R0G8 1455 aa20.4■□□□□ 0.86
Trav13-1-201ENSMUST00000103651 Ythdc2B2RR83 1445 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms