RNA–Protein interactions for RNA: ENSMUST00000103650.2

Trav12-1-201, Transcript of T cell receptor alpha variable 12-1 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav12-1, Length 344 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1-201ENSMUST00000103650 Chic1Q8CBW7 227 aa21.32■■□□□ 1
Trav12-1-201ENSMUST00000103650 Mapk8ip2Q9ERE9 830 aa20.86■□□□□ 0.93
Trav12-1-201ENSMUST00000103650 Phf23Q8BSN5 401 aa19.29■□□□□ 0.68
Trav12-1-201ENSMUST00000103650 Plppr3Q7TPB0 716 aa18.57■□□□□ 0.56
Trav12-1-201ENSMUST00000103650 Gab3Q8BSM5 595 aa18.41■□□□□ 0.54
Trav12-1-201ENSMUST00000103650 Gm35339A0A140LHH9 1649 aa18.32■□□□□ 0.52
Trav12-1-201ENSMUST00000103650 NischQ80TM9 1593 aa18.15■□□□□ 0.5
Trav12-1-201ENSMUST00000103650 Senp3Q9EP97 568 aaKnown RBP17.66■□□□□ 0.42
Trav12-1-201ENSMUST00000103650 Abcc9P70170 1546 aa17.57■□□□□ 0.4
Trav12-1-201ENSMUST00000103650 Abcc8B2RUS7 1588 aa17.54■□□□□ 0.4
Trav12-1-201ENSMUST00000103650 Kcna4Q61423 654 aa17.08■□□□□ 0.32
Trav12-1-201ENSMUST00000103650 ScribQ80U72 1612 aa16.84■□□□□ 0.29
Trav12-1-201ENSMUST00000103650 NacadQ5SWP3 1504 aa16.36■□□□□ 0.21
Trav12-1-201ENSMUST00000103650 Kdm5dQ62240 1548 aa16.32■□□□□ 0.2
Trav12-1-201ENSMUST00000103650 Dcaf1Q80TR8 1506 aa16.18■□□□□ 0.18
Trav12-1-201ENSMUST00000103650 Sycp2Q9CUU3 1500 aa16.04■□□□□ 0.16
Trav12-1-201ENSMUST00000103650 Rb1cc1Q9ESK9 1588 aa15.8■□□□□ 0.12
Trav12-1-201ENSMUST00000103650 BicraF8VPZ9 1578 aa15.78■□□□□ 0.12
Trav12-1-201ENSMUST00000103650 Rhox8Q6VSS7 320 aa15.77■□□□□ 0.12
Trav12-1-201ENSMUST00000103650 Baz1aO88379 1555 aa15.6■□□□□ 0.09
Trav12-1-201ENSMUST00000103650 Trap1aP19473 224 aa15.59■□□□□ 0.09
Trav12-1-201ENSMUST00000103650 Crybg2B7ZCC2 1516 aa15.58■□□□□ 0.09
Trav12-1-201ENSMUST00000103650 Ccdc180J3QNE4 1664 aa15.57■□□□□ 0.08
Trav12-1-201ENSMUST00000103650 Fam163aQ8CAA5 168 aa15.51■□□□□ 0.07
Trav12-1-201ENSMUST00000103650 Hoxd11P23813 323 aa15.47■□□□□ 0.07
Trav12-1-201ENSMUST00000103650 Zcchc6Q5BLK4 1491 aaKnown RBP15.38■□□□□ 0.05
Trav12-1-201ENSMUST00000103650 Pds5bQ4VA53 1446 aaKnown RBP15.37■□□□□ 0.05
Trav12-1-201ENSMUST00000103650 Dnajc5bQ9CQ94 199 aa15.3■□□□□ 0.04
Trav12-1-201ENSMUST00000103650 Atad2bE9Q166 1460 aaKnown RBP15.23■□□□□ 0.03
Trav12-1-201ENSMUST00000103650 Dmrt2Q8BG36 561 aa15.2■□□□□ 0.02
Trav12-1-201ENSMUST00000103650 Thoc2B1AZI6 1594 aaKnown RBP15.17■□□□□ 0.02
Trav12-1-201ENSMUST00000103650 Smarca2Q6DIC0 1577 aa15.15■□□□□ 0.02
Trav12-1-201ENSMUST00000103650 Cecr2E9Q2Z1 1453 aa15.1■□□□□ 0.01
Trav12-1-201ENSMUST00000103650 Smarca4Q3TKT4 1613 aaKnown RBP15.1■□□□□ 0.01
Trav12-1-201ENSMUST00000103650 Ppargc1bQ8VHJ7 1014 aa15.09■□□□□ 0.01
Trav12-1-201ENSMUST00000103650 Ercc6F8VPZ5 1481 aa15.01□□□□□ -0.01
Trav12-1-201ENSMUST00000103650 Iqgap2Q3UQ44 1575 aa15.01□□□□□ -0.01
Trav12-1-201ENSMUST00000103650 Cc2d2aQ8CFW7 1633 aa14.93□□□□□ -0.02
Trav12-1-201ENSMUST00000103650 Frmpd1A2AKB4 1549 aa14.87□□□□□ -0.03
Trav12-1-201ENSMUST00000103650 Wdr62Q3U3T8 1523 aa14.87□□□□□ -0.03
Trav12-1-201ENSMUST00000103650 Rtl1Q7M732 1744 aa14.87□□□□□ -0.03
Trav12-1-201ENSMUST00000103650 Znf219Q6IQX8 726 aa14.87□□□□□ -0.03
Trav12-1-201ENSMUST00000103650 Fam135aQ6NS59 1506 aa14.86□□□□□ -0.03
Trav12-1-201ENSMUST00000103650 Phldb1Q6PDH0 1371 aaKnown RBP14.81□□□□□ -0.04
Trav12-1-201ENSMUST00000103650 CftrP26361 1476 aa14.78□□□□□ -0.04
Trav12-1-201ENSMUST00000103650 Ccdc136Q3TVA9 1136 aa14.77□□□□□ -0.05
Trav12-1-201ENSMUST00000103650 Brd4Q9ESU6 1400 aaKnown RBP14.76□□□□□ -0.05
Trav12-1-201ENSMUST00000103650 Chrna2Q91X60 512 aa14.75□□□□□ -0.05
Trav12-1-201ENSMUST00000103650 Synj1Q8CHC4 1574 aa14.73□□□□□ -0.05
Trav12-1-201ENSMUST00000103650 Baz1bQ9Z277 1479 aa14.72□□□□□ -0.05
Trav12-1-201ENSMUST00000103650 Cttnbp2B9EJA2 1648 aa14.7□□□□□ -0.06
Trav12-1-201ENSMUST00000103650 Ubl4bQ9CQ84 188 aa14.68□□□□□ -0.06
Trav12-1-201ENSMUST00000103650 Rsph4aQ8BYM7 716 aa14.62□□□□□ -0.07
Trav12-1-201ENSMUST00000103650 Unc13aQ4KUS2 1712 aa14.58□□□□□ -0.07
Trav12-1-201ENSMUST00000103650 Trim41Q5NCC3 630 aa14.56□□□□□ -0.08
Trav12-1-201ENSMUST00000103650 Atf5O70191 283 aa14.54□□□□□ -0.08
Trav12-1-201ENSMUST00000103650 Esf1Q3V1V3 845 aaKnown RBP14.54□□□□□ -0.08
Trav12-1-201ENSMUST00000103650 Mrc2Q64449 1479 aa14.52□□□□□ -0.08
Trav12-1-201ENSMUST00000103650 Slc4a1apE9PX68 744 aa14.51□□□□□ -0.09
Trav12-1-201ENSMUST00000103650 Rimbp2Q80U40 1072 aa14.48□□□□□ -0.09
Trav12-1-201ENSMUST00000103650 Rsf1E9PWW9 1441 aaKnown RBP14.41□□□□□ -0.1
Trav12-1-201ENSMUST00000103650 Kif15Q6P9L6 1387 aa14.38□□□□□ -0.11
Trav12-1-201ENSMUST00000103650 Cux2P70298 1426 aa14.35□□□□□ -0.11
Trav12-1-201ENSMUST00000103650 Lamc3Q9R0B6 1581 aa14.3□□□□□ -0.12
Trav12-1-201ENSMUST00000103650 ArsiQ32KI9 573 aa14.28□□□□□ -0.12
Trav12-1-201ENSMUST00000103650 Golga3P55937 1487 aa14.26□□□□□ -0.13
Trav12-1-201ENSMUST00000103650 Ppp4r2Q0VGB7 417 aa14.26□□□□□ -0.13
Trav12-1-201ENSMUST00000103650 Npm1Q61937 292 aaKnown RBP14.23□□□□□ -0.13
Trav12-1-201ENSMUST00000103650 Top2bQ64511 1612 aa14.19□□□□□ -0.14
Trav12-1-201ENSMUST00000103650 Cngb1E1AZ71 1325 aa14.19□□□□□ -0.14
Trav12-1-201ENSMUST00000103650 Hs6st3Q9QYK4 470 aa14.19□□□□□ -0.14
Trav12-1-201ENSMUST00000103650 Cep164Q5DU05 1446 aa14.16□□□□□ -0.14
Trav12-1-201ENSMUST00000103650 TnnQ80Z71 1560 aa14.16□□□□□ -0.14
Trav12-1-201ENSMUST00000103650 Kif21aQ9QXL2 1672 aa14.16□□□□□ -0.14
Trav12-1-201ENSMUST00000103650 Lrriq1Q0P5X1 1673 aa14.15□□□□□ -0.14
Trav12-1-201ENSMUST00000103650 Ccdc18Q640L5 1455 aa14.12□□□□□ -0.15
Trav12-1-201ENSMUST00000103650 Il27Q8K3I6 234 aa14.09□□□□□ -0.15
Trav12-1-201ENSMUST00000103650 Fmn1Q05860 1466 aa14.08□□□□□ -0.16
Trav12-1-201ENSMUST00000103650 Akt1s1Q9D1F4 257 aa14.06□□□□□ -0.16
Trav12-1-201ENSMUST00000103650 LrpprcQ6PB66 1392 aaKnown RBP14.06□□□□□ -0.16
Trav12-1-201ENSMUST00000103650 Dhx29Q6PGC1 1365 aaKnown RBP14.06□□□□□ -0.16
Trav12-1-201ENSMUST00000103650 Camsap1A2AHC3 1581 aa14.05□□□□□ -0.16
Trav12-1-201ENSMUST00000103650 Urb2E9Q7L1 1524 aaKnown RBP14□□□□□ -0.17
Trav12-1-201ENSMUST00000103650 Plb1Q3TTY0 1478 aa13.99□□□□□ -0.17
Trav12-1-201ENSMUST00000103650 1700123L14RikQ3V2K7 440 aa13.98□□□□□ -0.17
Trav12-1-201ENSMUST00000103650 PogzQ8BZH4 1409 aaKnown RBP13.97□□□□□ -0.17
Trav12-1-201ENSMUST00000103650 Eif4g3Q80XI3 1579 aaKnown RBP13.96□□□□□ -0.18
Trav12-1-201ENSMUST00000103650 Crocc2F6XLV1 1638 aa13.94□□□□□ -0.18
Trav12-1-201ENSMUST00000103650 Duox2A2AQ99 1517 aa13.9□□□□□ -0.19
Trav12-1-201ENSMUST00000103650 Grin2bQ01097 1482 aa13.89□□□□□ -0.19
Trav12-1-201ENSMUST00000103650 Ift140E9PY46 1464 aa13.88□□□□□ -0.19
Trav12-1-201ENSMUST00000103650 Ccdc88bQ4QRL3 1481 aa13.88□□□□□ -0.19
Trav12-1-201ENSMUST00000103650 Bach1P97302 739 aa13.84□□□□□ -0.19
Trav12-1-201ENSMUST00000103650 Efcab5A0JP43 1406 aa13.83□□□□□ -0.2
Trav12-1-201ENSMUST00000103650 Top2aQ01320 1528 aaKnown RBP13.8□□□□□ -0.2
Trav12-1-201ENSMUST00000103650 Shroom2A2ALU4 1481 aa13.8□□□□□ -0.2
Trav12-1-201ENSMUST00000103650 Disp1Q3TDN0 1521 aa13.8□□□□□ -0.2
Trav12-1-201ENSMUST00000103650 Dnajc5P60904 198 aa13.79□□□□□ -0.2
Trav12-1-201ENSMUST00000103650 Rusc2Q80U22 1514 aa13.78□□□□□ -0.2
Trav12-1-201ENSMUST00000103650 NrkQ9R0G8 1455 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 80.2 ms