RNA–Protein interactions for RNA: ENSMUST00000103634.2

Trav13n-4-201, Transcript of T cell receptor alpha variable 13N-4 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13n-4, Length 267 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4-201ENSMUST00000103634 Gm35339A0A140LHH9 1649 aa17.54■□□□□ 0.4
Trav13n-4-201ENSMUST00000103634 NischQ80TM9 1593 aa17.1■□□□□ 0.33
Trav13n-4-201ENSMUST00000103634 Abcc9P70170 1546 aa16.7■□□□□ 0.26
Trav13n-4-201ENSMUST00000103634 Abcc8B2RUS7 1588 aa16.68■□□□□ 0.26
Trav13n-4-201ENSMUST00000103634 ScribQ80U72 1612 aa16.37■□□□□ 0.21
Trav13n-4-201ENSMUST00000103634 Chic1Q8CBW7 227 aa16.08■□□□□ 0.16
Trav13n-4-201ENSMUST00000103634 Mapk8ip2Q9ERE9 830 aa15.79■□□□□ 0.12
Trav13n-4-201ENSMUST00000103634 NacadQ5SWP3 1504 aa15.73■□□□□ 0.11
Trav13n-4-201ENSMUST00000103634 Kdm5dQ62240 1548 aa15.68■□□□□ 0.1
Trav13n-4-201ENSMUST00000103634 Dnajc5bQ9CQ94 199 aa15.53■□□□□ 0.08
Trav13n-4-201ENSMUST00000103634 Sycp2Q9CUU3 1500 aa15.46■□□□□ 0.07
Trav13n-4-201ENSMUST00000103634 BicraF8VPZ9 1578 aa15.35■□□□□ 0.05
Trav13n-4-201ENSMUST00000103634 Dcaf1Q80TR8 1506 aa15.27■□□□□ 0.04
Trav13n-4-201ENSMUST00000103634 Thoc2B1AZI6 1594 aaKnown RBP15.01□□□□□ -0.01
Trav13n-4-201ENSMUST00000103634 Pds5bQ4VA53 1446 aaKnown RBP14.92□□□□□ -0.02
Trav13n-4-201ENSMUST00000103634 Rb1cc1Q9ESK9 1588 aa14.85□□□□□ -0.03
Trav13n-4-201ENSMUST00000103634 Atad2bE9Q166 1460 aaKnown RBP14.72□□□□□ -0.05
Trav13n-4-201ENSMUST00000103634 Cc2d2aQ8CFW7 1633 aa14.71□□□□□ -0.05
Trav13n-4-201ENSMUST00000103634 Crybg2B7ZCC2 1516 aa14.65□□□□□ -0.06
Trav13n-4-201ENSMUST00000103634 Baz1aO88379 1555 aa14.63□□□□□ -0.07
Trav13n-4-201ENSMUST00000103634 Fam135aQ6NS59 1506 aa14.57□□□□□ -0.08
Trav13n-4-201ENSMUST00000103634 Ercc6F8VPZ5 1481 aa14.56□□□□□ -0.08
Trav13n-4-201ENSMUST00000103634 Ccdc180J3QNE4 1664 aa14.55□□□□□ -0.08
Trav13n-4-201ENSMUST00000103634 Smarca2Q6DIC0 1577 aa14.51□□□□□ -0.09
Trav13n-4-201ENSMUST00000103634 Phf23Q8BSN5 401 aa14.45□□□□□ -0.1
Trav13n-4-201ENSMUST00000103634 Zcchc6Q5BLK4 1491 aaKnown RBP14.44□□□□□ -0.1
Trav13n-4-201ENSMUST00000103634 Smarca4Q3TKT4 1613 aaKnown RBP14.44□□□□□ -0.1
Trav13n-4-201ENSMUST00000103634 Iqgap2Q3UQ44 1575 aa14.42□□□□□ -0.1
Trav13n-4-201ENSMUST00000103634 Dnajc5P60904 198 aa14.39□□□□□ -0.11
Trav13n-4-201ENSMUST00000103634 Wdr62Q3U3T8 1523 aa14.38□□□□□ -0.11
Trav13n-4-201ENSMUST00000103634 Frmpd1A2AKB4 1549 aa14.37□□□□□ -0.11
Trav13n-4-201ENSMUST00000103634 Baz1bQ9Z277 1479 aa14.36□□□□□ -0.11
Trav13n-4-201ENSMUST00000103634 Phldb1Q6PDH0 1371 aaKnown RBP14.34□□□□□ -0.11
Trav13n-4-201ENSMUST00000103634 Cecr2E9Q2Z1 1453 aa14.33□□□□□ -0.12
Trav13n-4-201ENSMUST00000103634 Rhox8Q6VSS7 320 aa14.27□□□□□ -0.13
Trav13n-4-201ENSMUST00000103634 Ubl4bQ9CQ84 188 aa14.19□□□□□ -0.14
Trav13n-4-201ENSMUST00000103634 Mrc2Q64449 1479 aa14.18□□□□□ -0.14
Trav13n-4-201ENSMUST00000103634 Unc13aQ4KUS2 1712 aa14.16□□□□□ -0.14
Trav13n-4-201ENSMUST00000103634 Trim41Q5NCC3 630 aa14.11□□□□□ -0.15
Trav13n-4-201ENSMUST00000103634 Lrriq1Q0P5X1 1673 aa13.92□□□□□ -0.18
Trav13n-4-201ENSMUST00000103634 CftrP26361 1476 aa13.91□□□□□ -0.18
Trav13n-4-201ENSMUST00000103634 Plppr3Q7TPB0 716 aa13.87□□□□□ -0.19
Trav13n-4-201ENSMUST00000103634 Cttnbp2B9EJA2 1648 aa13.86□□□□□ -0.19
Trav13n-4-201ENSMUST00000103634 Rsf1E9PWW9 1441 aaKnown RBP13.86□□□□□ -0.19
Trav13n-4-201ENSMUST00000103634 Gab3Q8BSM5 595 aa13.83□□□□□ -0.2
Trav13n-4-201ENSMUST00000103634 Synj1Q8CHC4 1574 aa13.83□□□□□ -0.2
Trav13n-4-201ENSMUST00000103634 Shroom2A2ALU4 1481 aa13.8□□□□□ -0.2
Trav13n-4-201ENSMUST00000103634 Cux2P70298 1426 aa13.77□□□□□ -0.21
Trav13n-4-201ENSMUST00000103634 Kif21aQ9QXL2 1672 aa13.75□□□□□ -0.21
Trav13n-4-201ENSMUST00000103634 Eif4g3Q80XI3 1579 aaKnown RBP13.71□□□□□ -0.21
Trav13n-4-201ENSMUST00000103634 Col17a1Q07563 1470 aa13.69□□□□□ -0.22
Trav13n-4-201ENSMUST00000103634 Brd4Q9ESU6 1400 aaKnown RBP13.69□□□□□ -0.22
Trav13n-4-201ENSMUST00000103634 Kif15Q6P9L6 1387 aa13.67□□□□□ -0.22
Trav13n-4-201ENSMUST00000103634 Lamc3Q9R0B6 1581 aa13.58□□□□□ -0.24
Trav13n-4-201ENSMUST00000103634 Urb2E9Q7L1 1524 aaKnown RBP13.55□□□□□ -0.24
Trav13n-4-201ENSMUST00000103634 Npm1Q61937 292 aaKnown RBP13.52□□□□□ -0.25
Trav13n-4-201ENSMUST00000103634 Top2bQ64511 1612 aa13.52□□□□□ -0.25
Trav13n-4-201ENSMUST00000103634 Rtl1Q7M732 1744 aa13.51□□□□□ -0.25
Trav13n-4-201ENSMUST00000103634 Pabpn1Q8CCS6 302 aaKnown RBP13.51□□□□□ -0.25
Trav13n-4-201ENSMUST00000103634 Plb1Q3TTY0 1478 aa13.5□□□□□ -0.25
Trav13n-4-201ENSMUST00000103634 Esf1Q3V1V3 845 aaKnown RBP13.49□□□□□ -0.25
Trav13n-4-201ENSMUST00000103634 Cep164Q5DU05 1446 aa13.48□□□□□ -0.25
Trav13n-4-201ENSMUST00000103634 Ccdc136Q3TVA9 1136 aa13.47□□□□□ -0.25
Trav13n-4-201ENSMUST00000103634 Dhx29Q6PGC1 1365 aaKnown RBP13.45□□□□□ -0.26
Trav13n-4-201ENSMUST00000103634 Zcchc11B2RX14 1644 aaKnown RBP13.42□□□□□ -0.26
Trav13n-4-201ENSMUST00000103634 Rusc2Q80U22 1514 aa13.39□□□□□ -0.27
Trav13n-4-201ENSMUST00000103634 Crocc2F6XLV1 1638 aa13.37□□□□□ -0.27
Trav13n-4-201ENSMUST00000103634 LrpprcQ6PB66 1392 aaKnown RBP13.36□□□□□ -0.27
Trav13n-4-201ENSMUST00000103634 Pelp1Q9DBD5 1123 aaKnown RBP13.34□□□□□ -0.27
Trav13n-4-201ENSMUST00000103634 TnnQ80Z71 1560 aa13.33□□□□□ -0.28
Trav13n-4-201ENSMUST00000103634 Ift140E9PY46 1464 aa13.33□□□□□ -0.28
Trav13n-4-201ENSMUST00000103634 Pcdh10E9PXQ7 1057 aa13.32□□□□□ -0.28
Trav13n-4-201ENSMUST00000103634 Ccdc18Q640L5 1455 aa13.31□□□□□ -0.28
Trav13n-4-201ENSMUST00000103634 Camsap1A2AHC3 1581 aa13.28□□□□□ -0.28
Trav13n-4-201ENSMUST00000103634 Il27Q8K3I6 234 aa13.28□□□□□ -0.28
Trav13n-4-201ENSMUST00000103634 PogzQ8BZH4 1409 aaKnown RBP13.26□□□□□ -0.29
Trav13n-4-201ENSMUST00000103634 Arhgef5E9Q7D5 1581 aa13.23□□□□□ -0.29
Trav13n-4-201ENSMUST00000103634 Senp3Q9EP97 568 aaKnown RBP13.22□□□□□ -0.29
Trav13n-4-201ENSMUST00000103634 Disp1Q3TDN0 1521 aa13.22□□□□□ -0.29
Trav13n-4-201ENSMUST00000103634 Adgrl3Q80TS3 1537 aa13.2□□□□□ -0.3
Trav13n-4-201ENSMUST00000103634 Setd1bQ8CFT2 1985 aa13.19□□□□□ -0.3
Trav13n-4-201ENSMUST00000103634 Duox2A2AQ99 1517 aa13.18□□□□□ -0.3
Trav13n-4-201ENSMUST00000103634 Nup160Q9Z0W3 1402 aaKnown RBP13.17□□□□□ -0.3
Trav13n-4-201ENSMUST00000103634 Golga3P55937 1487 aa13.14□□□□□ -0.31
Trav13n-4-201ENSMUST00000103634 Cc2d2bA0A286YDU8 1405 aa13.13□□□□□ -0.31
Trav13n-4-201ENSMUST00000103634 Cep170Q6A065 1588 aa13.13□□□□□ -0.31
Trav13n-4-201ENSMUST00000103634 PtprkP35822 1457 aa13.13□□□□□ -0.31
Trav13n-4-201ENSMUST00000103634 PtprtQ99M80 1454 aa13.12□□□□□ -0.31
Trav13n-4-201ENSMUST00000103634 Gm156Q58A37 223 aa13.11□□□□□ -0.31
Trav13n-4-201ENSMUST00000103634 Samd9lQ69Z37 1561 aa13.1□□□□□ -0.31
Trav13n-4-201ENSMUST00000103634 Gapvd1Q6PAR5 1458 aa13.1□□□□□ -0.31
Trav13n-4-201ENSMUST00000103634 Pbrm1Q8BSQ9 1634 aaKnown RBP13.1□□□□□ -0.31
Trav13n-4-201ENSMUST00000103634 Grin2bQ01097 1482 aa13.07□□□□□ -0.32
Trav13n-4-201ENSMUST00000103634 Ttbk1Q6PCN3 1308 aa13.06□□□□□ -0.32
Trav13n-4-201ENSMUST00000103634 Fgd6Q69ZL1 1399 aa13.06□□□□□ -0.32
Trav13n-4-201ENSMUST00000103634 Pprc1Q6NZN1 1644 aa13.03□□□□□ -0.32
Trav13n-4-201ENSMUST00000103634 Fmn1Q05860 1466 aa13.03□□□□□ -0.32
Trav13n-4-201ENSMUST00000103634 AqrQ8CFQ3 1481 aaKnown RBP13.03□□□□□ -0.32
Trav13n-4-201ENSMUST00000103634 Magi3Q9EQJ9 1476 aa13.01□□□□□ -0.33
Trav13n-4-201ENSMUST00000103634 Rad54l2Q99NG0 1466 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 1291.4 ms