RNA–Protein interactions for RNA: ENSMUST00000103626.2

Trav9n-4-201, Transcript of T cell receptor alpha variable 9N-4 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav9n-4, Length 595 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4-201ENSMUST00000103626 NischQ80TM9 1593 aa17.31■□□□□ 0.36
Trav9n-4-201ENSMUST00000103626 Gm35339A0A140LHH9 1649 aa17.24■□□□□ 0.35
Trav9n-4-201ENSMUST00000103626 Abcc9P70170 1546 aa16.86■□□□□ 0.29
Trav9n-4-201ENSMUST00000103626 Abcc8B2RUS7 1588 aa16.44■□□□□ 0.22
Trav9n-4-201ENSMUST00000103626 Rtl1Q7M732 1744 aa15.91■□□□□ 0.14
Trav9n-4-201ENSMUST00000103626 Mapk8ip2Q9ERE9 830 aa15.78■□□□□ 0.12
Trav9n-4-201ENSMUST00000103626 Rhox8Q6VSS7 320 aa15.76■□□□□ 0.11
Trav9n-4-201ENSMUST00000103626 ScribQ80U72 1612 aa15.5■□□□□ 0.07
Trav9n-4-201ENSMUST00000103626 Dcaf1Q80TR8 1506 aa15.49■□□□□ 0.07
Trav9n-4-201ENSMUST00000103626 Chic1Q8CBW7 227 aa15.49■□□□□ 0.07
Trav9n-4-201ENSMUST00000103626 Ccdc180J3QNE4 1664 aa15.39■□□□□ 0.05
Trav9n-4-201ENSMUST00000103626 Rb1cc1Q9ESK9 1588 aa15.21■□□□□ 0.03
Trav9n-4-201ENSMUST00000103626 Dnajc5bQ9CQ94 199 aa15.21■□□□□ 0.03
Trav9n-4-201ENSMUST00000103626 Kdm5dQ62240 1548 aa15.11■□□□□ 0.01
Trav9n-4-201ENSMUST00000103626 NacadQ5SWP3 1504 aa15.1■□□□□ 0.01
Trav9n-4-201ENSMUST00000103626 Baz1aO88379 1555 aa15.05■□□□□ -0
Trav9n-4-201ENSMUST00000103626 Zcchc6Q5BLK4 1491 aaKnown RBP14.9□□□□□ -0.02
Trav9n-4-201ENSMUST00000103626 Crybg2B7ZCC2 1516 aa14.83□□□□□ -0.04
Trav9n-4-201ENSMUST00000103626 Sycp2Q9CUU3 1500 aa14.71□□□□□ -0.06
Trav9n-4-201ENSMUST00000103626 Smarca2Q6DIC0 1577 aa14.65□□□□□ -0.06
Trav9n-4-201ENSMUST00000103626 BicraF8VPZ9 1578 aa14.56□□□□□ -0.08
Trav9n-4-201ENSMUST00000103626 Ccdc136Q3TVA9 1136 aa14.47□□□□□ -0.09
Trav9n-4-201ENSMUST00000103626 HrcG5E8J6 738 aa14.45□□□□□ -0.1
Trav9n-4-201ENSMUST00000103626 Trim41Q5NCC3 630 aa14.45□□□□□ -0.1
Trav9n-4-201ENSMUST00000103626 Thoc2B1AZI6 1594 aaKnown RBP14.38□□□□□ -0.11
Trav9n-4-201ENSMUST00000103626 Brd4Q9ESU6 1400 aaKnown RBP14.36□□□□□ -0.11
Trav9n-4-201ENSMUST00000103626 Dnajc5P60904 198 aa14.29□□□□□ -0.12
Trav9n-4-201ENSMUST00000103626 Pds5bQ4VA53 1446 aaKnown RBP14.2□□□□□ -0.14
Trav9n-4-201ENSMUST00000103626 Cttnbp2B9EJA2 1648 aa14.17□□□□□ -0.14
Trav9n-4-201ENSMUST00000103626 Rpgrip1Q9EPQ2 1331 aa14.16□□□□□ -0.14
Trav9n-4-201ENSMUST00000103626 Cep164Q5DU05 1446 aa14.15□□□□□ -0.14
Trav9n-4-201ENSMUST00000103626 Smarca4Q3TKT4 1613 aaKnown RBP14.13□□□□□ -0.15
Trav9n-4-201ENSMUST00000103626 Synj1Q8CHC4 1574 aa14.12□□□□□ -0.15
Trav9n-4-201ENSMUST00000103626 Cecr2E9Q2Z1 1453 aa14.12□□□□□ -0.15
Trav9n-4-201ENSMUST00000103626 Cc2d2aQ8CFW7 1633 aa14.11□□□□□ -0.15
Trav9n-4-201ENSMUST00000103626 Golga3P55937 1487 aa14.08□□□□□ -0.16
Trav9n-4-201ENSMUST00000103626 CftrP26361 1476 aa14.05□□□□□ -0.16
Trav9n-4-201ENSMUST00000103626 Cngb1E1AZ71 1325 aa14.02□□□□□ -0.17
Trav9n-4-201ENSMUST00000103626 Phf23Q8BSN5 401 aa13.99□□□□□ -0.17
Trav9n-4-201ENSMUST00000103626 Atad2bE9Q166 1460 aaKnown RBP13.96□□□□□ -0.17
Trav9n-4-201ENSMUST00000103626 Top2bQ64511 1612 aa13.96□□□□□ -0.17
Trav9n-4-201ENSMUST00000103626 Esf1Q3V1V3 845 aaKnown RBP13.95□□□□□ -0.18
Trav9n-4-201ENSMUST00000103626 Iqgap2Q3UQ44 1575 aa13.92□□□□□ -0.18
Trav9n-4-201ENSMUST00000103626 Fam135aQ6NS59 1506 aa13.9□□□□□ -0.19
Trav9n-4-201ENSMUST00000103626 Ercc6F8VPZ5 1481 aa13.87□□□□□ -0.19
Trav9n-4-201ENSMUST00000103626 Rsf1E9PWW9 1441 aaKnown RBP13.86□□□□□ -0.19
Trav9n-4-201ENSMUST00000103626 Fmn1Q05860 1466 aa13.8□□□□□ -0.2
Trav9n-4-201ENSMUST00000103626 Acin1Q9JIX8 1338 aaKnown RBP13.79□□□□□ -0.2
Trav9n-4-201ENSMUST00000103626 Ccdc88bQ4QRL3 1481 aa13.75□□□□□ -0.21
Trav9n-4-201ENSMUST00000103626 Top2aQ01320 1528 aaKnown RBP13.67□□□□□ -0.22
Trav9n-4-201ENSMUST00000103626 Wdr62Q3U3T8 1523 aa13.65□□□□□ -0.22
Trav9n-4-201ENSMUST00000103626 Phldb1Q6PDH0 1371 aaKnown RBP13.65□□□□□ -0.22
Trav9n-4-201ENSMUST00000103626 Gab3Q8BSM5 595 aa13.63□□□□□ -0.23
Trav9n-4-201ENSMUST00000103626 Frmpd1A2AKB4 1549 aa13.62□□□□□ -0.23
Trav9n-4-201ENSMUST00000103626 TnnQ80Z71 1560 aa13.62□□□□□ -0.23
Trav9n-4-201ENSMUST00000103626 Ehmt2Q9Z148 1263 aaKnown RBP13.59□□□□□ -0.23
Trav9n-4-201ENSMUST00000103626 Baz1bQ9Z277 1479 aa13.59□□□□□ -0.23
Trav9n-4-201ENSMUST00000103626 Ubl4bQ9CQ84 188 aa13.58□□□□□ -0.24
Trav9n-4-201ENSMUST00000103626 Mrc2Q64449 1479 aa13.56□□□□□ -0.24
Trav9n-4-201ENSMUST00000103626 Rapgef2Q8CHG7 1496 aa13.55□□□□□ -0.24
Trav9n-4-201ENSMUST00000103626 Lamc3Q9R0B6 1581 aa13.52□□□□□ -0.25
Trav9n-4-201ENSMUST00000103626 Unc13aQ4KUS2 1712 aa13.47□□□□□ -0.25
Trav9n-4-201ENSMUST00000103626 Npm2Q80W85 207 aa13.42□□□□□ -0.26
Trav9n-4-201ENSMUST00000103626 Ccdc18Q640L5 1455 aa13.42□□□□□ -0.26
Trav9n-4-201ENSMUST00000103626 Cep162Q6ZQ06 1403 aa13.4□□□□□ -0.26
Trav9n-4-201ENSMUST00000103626 Kif15Q6P9L6 1387 aa13.4□□□□□ -0.26
Trav9n-4-201ENSMUST00000103626 Camsap1A2AHC3 1581 aa13.38□□□□□ -0.27
Trav9n-4-201ENSMUST00000103626 Eif4g1Q6NZJ6 1600 aaKnown RBP13.35□□□□□ -0.27
Trav9n-4-201ENSMUST00000103626 Shroom2A2ALU4 1481 aa13.33□□□□□ -0.28
Trav9n-4-201ENSMUST00000103626 Lrriq1Q0P5X1 1673 aa13.31□□□□□ -0.28
Trav9n-4-201ENSMUST00000103626 Col17a1Q07563 1470 aa13.31□□□□□ -0.28
Trav9n-4-201ENSMUST00000103626 Shroom4Q1W617 1475 aa13.31□□□□□ -0.28
Trav9n-4-201ENSMUST00000103626 NrkQ9R0G8 1455 aa13.31□□□□□ -0.28
Trav9n-4-201ENSMUST00000103626 Map3k1P53349 1493 aa13.3□□□□□ -0.28
Trav9n-4-201ENSMUST00000103626 NefmP08553 848 aa13.28□□□□□ -0.28
Trav9n-4-201ENSMUST00000103626 Myt1lP97500 1187 aa13.26□□□□□ -0.29
Trav9n-4-201ENSMUST00000103626 Grin2bQ01097 1482 aa13.23□□□□□ -0.29
Trav9n-4-201ENSMUST00000103626 Arhgap35Q91YM2 1499 aa13.21□□□□□ -0.3
Trav9n-4-201ENSMUST00000103626 Il27Q8K3I6 234 aa13.19□□□□□ -0.3
Trav9n-4-201ENSMUST00000103626 Cux2P70298 1426 aa13.19□□□□□ -0.3
Trav9n-4-201ENSMUST00000103626 Clip1Q922J3 1391 aa13.19□□□□□ -0.3
Trav9n-4-201ENSMUST00000103626 AqrQ8CFQ3 1481 aaKnown RBP13.18□□□□□ -0.3
Trav9n-4-201ENSMUST00000103626 Eea1Q8BL66 1411 aa13.16□□□□□ -0.3
Trav9n-4-201ENSMUST00000103626 Npm1Q61937 292 aaKnown RBP13.16□□□□□ -0.3
Trav9n-4-201ENSMUST00000103626 Zeb1Q64318 1117 aa13.16□□□□□ -0.3
Trav9n-4-201ENSMUST00000103626 PtprkP35822 1457 aa13.12□□□□□ -0.31
Trav9n-4-201ENSMUST00000103626 Erich3F6QRE9 1637 aa13.12□□□□□ -0.31
Trav9n-4-201ENSMUST00000103626 Mroh2bQ7M6Y6 1581 aa13.11□□□□□ -0.31
Trav9n-4-201ENSMUST00000103626 Efcab5A0JP43 1406 aa13.11□□□□□ -0.31
Trav9n-4-201ENSMUST00000103626 Eif4g3Q80XI3 1579 aaKnown RBP13.1□□□□□ -0.31
Trav9n-4-201ENSMUST00000103626 Polr1aO35134 1717 aaKnown RBP13.1□□□□□ -0.31
Trav9n-4-201ENSMUST00000103626 Mier1Q5UAK0 511 aa13.09□□□□□ -0.31
Trav9n-4-201ENSMUST00000103626 LrpprcQ6PB66 1392 aaKnown RBP13.08□□□□□ -0.31
Trav9n-4-201ENSMUST00000103626 PogzQ8BZH4 1409 aaKnown RBP13.08□□□□□ -0.32
Trav9n-4-201ENSMUST00000103626 Pcdh10E9PXQ7 1057 aa13.08□□□□□ -0.32
Trav9n-4-201ENSMUST00000103626 Kif21aQ9QXL2 1672 aa13.08□□□□□ -0.32
Trav9n-4-201ENSMUST00000103626 UbtfP25976 765 aaKnown RBP13.07□□□□□ -0.32
Trav9n-4-201ENSMUST00000103626 Pabpn1Q8CCS6 302 aaKnown RBP13.06□□□□□ -0.32
Trav9n-4-201ENSMUST00000103626 Arhgef5E9Q7D5 1581 aa13.05□□□□□ -0.32
Trav9n-4-201ENSMUST00000103626 Setd5Q5XJV7 1441 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 133.7 ms