RNA–Protein interactions for RNA: ENSMUST00000103607.2

Trav13d-4-201, Transcript of T cell receptor alpha variable 13D-4 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13d-4, Length 264 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4-201ENSMUST00000103607 Gm35339A0A140LHH9 1649 aa25.52■■□□□ 1.68
Trav13d-4-201ENSMUST00000103607 NischQ80TM9 1593 aa25.35■■□□□ 1.65
Trav13d-4-201ENSMUST00000103607 Abcc9P70170 1546 aa24.62■■□□□ 1.53
Trav13d-4-201ENSMUST00000103607 Abcc8B2RUS7 1588 aa24.29■■□□□ 1.48
Trav13d-4-201ENSMUST00000103607 ScribQ80U72 1612 aa23.19■■□□□ 1.3
Trav13d-4-201ENSMUST00000103607 Kdm5dQ62240 1548 aa22.53■■□□□ 1.2
Trav13d-4-201ENSMUST00000103607 Dcaf1Q80TR8 1506 aa22.5■■□□□ 1.19
Trav13d-4-201ENSMUST00000103607 NacadQ5SWP3 1504 aa22.43■■□□□ 1.18
Trav13d-4-201ENSMUST00000103607 Rhox8Q6VSS7 320 aa22.42■■□□□ 1.18
Trav13d-4-201ENSMUST00000103607 Rb1cc1Q9ESK9 1588 aa22.23■■□□□ 1.15
Trav13d-4-201ENSMUST00000103607 Ccdc180J3QNE4 1664 aa22.03■■□□□ 1.12
Trav13d-4-201ENSMUST00000103607 Sycp2Q9CUU3 1500 aa21.96■■□□□ 1.11
Trav13d-4-201ENSMUST00000103607 Baz1aO88379 1555 aa21.9■■□□□ 1.1
Trav13d-4-201ENSMUST00000103607 Rtl1Q7M732 1744 aa21.75■■□□□ 1.07
Trav13d-4-201ENSMUST00000103607 BicraF8VPZ9 1578 aa21.6■■□□□ 1.05
Trav13d-4-201ENSMUST00000103607 Crybg2B7ZCC2 1516 aa21.55■■□□□ 1.04
Trav13d-4-201ENSMUST00000103607 Zcchc6Q5BLK4 1491 aaKnown RBP21.48■■□□□ 1.03
Trav13d-4-201ENSMUST00000103607 Smarca2Q6DIC0 1577 aa21.31■■□□□ 1
Trav13d-4-201ENSMUST00000103607 Cecr2E9Q2Z1 1453 aa20.91■□□□□ 0.94
Trav13d-4-201ENSMUST00000103607 Smarca4Q3TKT4 1613 aaKnown RBP20.91■□□□□ 0.94
Trav13d-4-201ENSMUST00000103607 Pds5bQ4VA53 1446 aaKnown RBP20.82■□□□□ 0.92
Trav13d-4-201ENSMUST00000103607 Ccdc136Q3TVA9 1136 aa20.81■□□□□ 0.92
Trav13d-4-201ENSMUST00000103607 Atad2bE9Q166 1460 aaKnown RBP20.74■□□□□ 0.91
Trav13d-4-201ENSMUST00000103607 Iqgap2Q3UQ44 1575 aa20.72■□□□□ 0.91
Trav13d-4-201ENSMUST00000103607 Cttnbp2B9EJA2 1648 aa20.68■□□□□ 0.9
Trav13d-4-201ENSMUST00000103607 Brd4Q9ESU6 1400 aaKnown RBP20.68■□□□□ 0.9
Trav13d-4-201ENSMUST00000103607 Synj1Q8CHC4 1574 aa20.67■□□□□ 0.9
Trav13d-4-201ENSMUST00000103607 Thoc2B1AZI6 1594 aaKnown RBP20.55■□□□□ 0.88
Trav13d-4-201ENSMUST00000103607 CftrP26361 1476 aa20.55■□□□□ 0.88
Trav13d-4-201ENSMUST00000103607 Ercc6F8VPZ5 1481 aa20.54■□□□□ 0.88
Trav13d-4-201ENSMUST00000103607 Trim41Q5NCC3 630 aa20.48■□□□□ 0.87
Trav13d-4-201ENSMUST00000103607 Wdr62Q3U3T8 1523 aa20.43■□□□□ 0.86
Trav13d-4-201ENSMUST00000103607 Frmpd1A2AKB4 1549 aa20.32■□□□□ 0.84
Trav13d-4-201ENSMUST00000103607 Unc13aQ4KUS2 1712 aa20.3■□□□□ 0.84
Trav13d-4-201ENSMUST00000103607 Cc2d2aQ8CFW7 1633 aa20.26■□□□□ 0.83
Trav13d-4-201ENSMUST00000103607 Esf1Q3V1V3 845 aaKnown RBP20.23■□□□□ 0.83
Trav13d-4-201ENSMUST00000103607 Fam135aQ6NS59 1506 aa20.18■□□□□ 0.82
Trav13d-4-201ENSMUST00000103607 Golga3P55937 1487 aa20.17■□□□□ 0.82
Trav13d-4-201ENSMUST00000103607 Top2bQ64511 1612 aa20.16■□□□□ 0.82
Trav13d-4-201ENSMUST00000103607 Cngb1E1AZ71 1325 aa20.1■□□□□ 0.81
Trav13d-4-201ENSMUST00000103607 Phldb1Q6PDH0 1371 aaKnown RBP20.02■□□□□ 0.8
Trav13d-4-201ENSMUST00000103607 Dnajc5bQ9CQ94 199 aa19.98■□□□□ 0.79
Trav13d-4-201ENSMUST00000103607 TnnQ80Z71 1560 aa19.88■□□□□ 0.77
Trav13d-4-201ENSMUST00000103607 Lamc3Q9R0B6 1581 aa19.88■□□□□ 0.77
Trav13d-4-201ENSMUST00000103607 Rsf1E9PWW9 1441 aaKnown RBP19.88■□□□□ 0.77
Trav13d-4-201ENSMUST00000103607 Baz1bQ9Z277 1479 aa19.86■□□□□ 0.77
Trav13d-4-201ENSMUST00000103607 Fmn1Q05860 1466 aa19.86■□□□□ 0.77
Trav13d-4-201ENSMUST00000103607 Kif15Q6P9L6 1387 aa19.8■□□□□ 0.76
Trav13d-4-201ENSMUST00000103607 Ubl4bQ9CQ84 188 aa19.77■□□□□ 0.76
Trav13d-4-201ENSMUST00000103607 Ccdc88bQ4QRL3 1481 aa19.75■□□□□ 0.75
Trav13d-4-201ENSMUST00000103607 HrcG5E8J6 738 aa19.73■□□□□ 0.75
Trav13d-4-201ENSMUST00000103607 Mrc2Q64449 1479 aa19.69■□□□□ 0.74
Trav13d-4-201ENSMUST00000103607 Cep164Q5DU05 1446 aa19.66■□□□□ 0.74
Trav13d-4-201ENSMUST00000103607 Camsap1A2AHC3 1581 aa19.66■□□□□ 0.74
Trav13d-4-201ENSMUST00000103607 Cux2P70298 1426 aa19.64■□□□□ 0.73
Trav13d-4-201ENSMUST00000103607 Top2aQ01320 1528 aaKnown RBP19.62■□□□□ 0.73
Trav13d-4-201ENSMUST00000103607 Chic1Q8CBW7 227 aa19.58■□□□□ 0.72
Trav13d-4-201ENSMUST00000103607 Ccdc18Q640L5 1455 aa19.58■□□□□ 0.72
Trav13d-4-201ENSMUST00000103607 Kif21aQ9QXL2 1672 aa19.55■□□□□ 0.72
Trav13d-4-201ENSMUST00000103607 Il27Q8K3I6 234 aa19.47■□□□□ 0.71
Trav13d-4-201ENSMUST00000103607 Npm1Q61937 292 aaKnown RBP19.42■□□□□ 0.7
Trav13d-4-201ENSMUST00000103607 Grin2bQ01097 1482 aa19.35■□□□□ 0.69
Trav13d-4-201ENSMUST00000103607 Lrriq1Q0P5X1 1673 aa19.33■□□□□ 0.69
Trav13d-4-201ENSMUST00000103607 Crocc2F6XLV1 1638 aa19.33■□□□□ 0.69
Trav13d-4-201ENSMUST00000103607 Gab3Q8BSM5 595 aa19.31■□□□□ 0.68
Trav13d-4-201ENSMUST00000103607 LrpprcQ6PB66 1392 aaKnown RBP19.29■□□□□ 0.68
Trav13d-4-201ENSMUST00000103607 PogzQ8BZH4 1409 aaKnown RBP19.26■□□□□ 0.67
Trav13d-4-201ENSMUST00000103607 Dhx29Q6PGC1 1365 aaKnown RBP19.26■□□□□ 0.67
Trav13d-4-201ENSMUST00000103607 Shroom4Q1W617 1475 aa19.25■□□□□ 0.67
Trav13d-4-201ENSMUST00000103607 NrkQ9R0G8 1455 aa19.24■□□□□ 0.67
Trav13d-4-201ENSMUST00000103607 Duox2A2AQ99 1517 aa19.2■□□□□ 0.66
Trav13d-4-201ENSMUST00000103607 Rapgef2Q8CHG7 1496 aa19.19■□□□□ 0.66
Trav13d-4-201ENSMUST00000103607 Samd9lQ69Z37 1561 aa19.19■□□□□ 0.66
Trav13d-4-201ENSMUST00000103607 PtprkP35822 1457 aa19.16■□□□□ 0.66
Trav13d-4-201ENSMUST00000103607 Npm2Q80W85 207 aa19.14■□□□□ 0.65
Trav13d-4-201ENSMUST00000103607 Urb2E9Q7L1 1524 aaKnown RBP19.12■□□□□ 0.65
Trav13d-4-201ENSMUST00000103607 Eif4g1Q6NZJ6 1600 aaKnown RBP19.11■□□□□ 0.65
Trav13d-4-201ENSMUST00000103607 Efcab5A0JP43 1406 aa19.09■□□□□ 0.65
Trav13d-4-201ENSMUST00000103607 Plb1Q3TTY0 1478 aa19.09■□□□□ 0.65
Trav13d-4-201ENSMUST00000103607 Eif4g3Q80XI3 1579 aaKnown RBP19.06■□□□□ 0.64
Trav13d-4-201ENSMUST00000103607 Pbrm1Q8BSQ9 1634 aaKnown RBP19.04■□□□□ 0.64
Trav13d-4-201ENSMUST00000103607 Cep162Q6ZQ06 1403 aa19.03■□□□□ 0.64
Trav13d-4-201ENSMUST00000103607 SynmQ70IV5 1561 aa19.02■□□□□ 0.64
Trav13d-4-201ENSMUST00000103607 Zeb1Q64318 1117 aa19■□□□□ 0.63
Trav13d-4-201ENSMUST00000103607 Ift140E9PY46 1464 aa18.99■□□□□ 0.63
Trav13d-4-201ENSMUST00000103607 Arhgap35Q91YM2 1499 aa18.99■□□□□ 0.63
Trav13d-4-201ENSMUST00000103607 Map3k1P53349 1493 aa18.98■□□□□ 0.63
Trav13d-4-201ENSMUST00000103607 Setd1bQ8CFT2 1985 aa18.98■□□□□ 0.63
Trav13d-4-201ENSMUST00000103607 Mroh2bQ7M6Y6 1581 aa18.96■□□□□ 0.63
Trav13d-4-201ENSMUST00000103607 Rad54l2Q99NG0 1466 aa18.94■□□□□ 0.62
Trav13d-4-201ENSMUST00000103607 AqrQ8CFQ3 1481 aaKnown RBP18.9■□□□□ 0.62
Trav13d-4-201ENSMUST00000103607 Rusc2Q80U22 1514 aa18.9■□□□□ 0.62
Trav13d-4-201ENSMUST00000103607 Myt1lP97500 1187 aa18.89■□□□□ 0.61
Trav13d-4-201ENSMUST00000103607 Magi3Q9EQJ9 1476 aa18.89■□□□□ 0.61
Trav13d-4-201ENSMUST00000103607 Grin2aP35436 1464 aa18.88■□□□□ 0.61
Trav13d-4-201ENSMUST00000103607 Disp1Q3TDN0 1521 aa18.88■□□□□ 0.61
Trav13d-4-201ENSMUST00000103607 Gpatch8A2A6A1 1505 aa18.86■□□□□ 0.61
Trav13d-4-201ENSMUST00000103607 Pla2r1Q62028 1487 aa18.85■□□□□ 0.61
Trav13d-4-201ENSMUST00000103607 Nup160Q9Z0W3 1402 aaKnown RBP18.81■□□□□ 0.6
Trav13d-4-201ENSMUST00000103607 Polr1aO35134 1717 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms