RNA–Protein interactions for RNA: ENSMUST00000103588.3

Trav13d-1-201, Transcript of T cell receptor alpha variable 13D-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13d-1, Length 396 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1-201ENSMUST00000103588 Gm35339A0A140LHH9 1649 aa25.36■■□□□ 1.65
Trav13d-1-201ENSMUST00000103588 NischQ80TM9 1593 aa25.04■■□□□ 1.6
Trav13d-1-201ENSMUST00000103588 Abcc8B2RUS7 1588 aa24.25■■□□□ 1.47
Trav13d-1-201ENSMUST00000103588 Abcc9P70170 1546 aa24.17■■□□□ 1.46
Trav13d-1-201ENSMUST00000103588 ScribQ80U72 1612 aa23.48■■□□□ 1.35
Trav13d-1-201ENSMUST00000103588 NacadQ5SWP3 1504 aa22.76■■□□□ 1.23
Trav13d-1-201ENSMUST00000103588 Kdm5dQ62240 1548 aa22.7■■□□□ 1.22
Trav13d-1-201ENSMUST00000103588 Sycp2Q9CUU3 1500 aa22.31■■□□□ 1.16
Trav13d-1-201ENSMUST00000103588 Dcaf1Q80TR8 1506 aa22.21■■□□□ 1.15
Trav13d-1-201ENSMUST00000103588 BicraF8VPZ9 1578 aa22.03■■□□□ 1.12
Trav13d-1-201ENSMUST00000103588 Dnajc5bQ9CQ94 199 aa21.85■■□□□ 1.09
Trav13d-1-201ENSMUST00000103588 Rb1cc1Q9ESK9 1588 aa21.82■■□□□ 1.08
Trav13d-1-201ENSMUST00000103588 Rhox8Q6VSS7 320 aa21.61■■□□□ 1.05
Trav13d-1-201ENSMUST00000103588 Pds5bQ4VA53 1446 aaKnown RBP21.51■■□□□ 1.03
Trav13d-1-201ENSMUST00000103588 Baz1aO88379 1555 aa21.47■■□□□ 1.03
Trav13d-1-201ENSMUST00000103588 Crybg2B7ZCC2 1516 aa21.38■■□□□ 1.01
Trav13d-1-201ENSMUST00000103588 Thoc2B1AZI6 1594 aaKnown RBP21.35■■□□□ 1.01
Trav13d-1-201ENSMUST00000103588 Ccdc180J3QNE4 1664 aa21.31■■□□□ 1
Trav13d-1-201ENSMUST00000103588 Zcchc6Q5BLK4 1491 aaKnown RBP21.3■■□□□ 1
Trav13d-1-201ENSMUST00000103588 Atad2bE9Q166 1460 aaKnown RBP21.25■□□□□ 0.99
Trav13d-1-201ENSMUST00000103588 Ercc6F8VPZ5 1481 aa21.07■□□□□ 0.96
Trav13d-1-201ENSMUST00000103588 Cc2d2aQ8CFW7 1633 aa21.04■□□□□ 0.96
Trav13d-1-201ENSMUST00000103588 Smarca2Q6DIC0 1577 aa20.97■□□□□ 0.95
Trav13d-1-201ENSMUST00000103588 Smarca4Q3TKT4 1613 aaKnown RBP20.97■□□□□ 0.95
Trav13d-1-201ENSMUST00000103588 Iqgap2Q3UQ44 1575 aa20.9■□□□□ 0.94
Trav13d-1-201ENSMUST00000103588 Cecr2E9Q2Z1 1453 aa20.89■□□□□ 0.94
Trav13d-1-201ENSMUST00000103588 Fam135aQ6NS59 1506 aa20.83■□□□□ 0.92
Trav13d-1-201ENSMUST00000103588 Wdr62Q3U3T8 1523 aa20.74■□□□□ 0.91
Trav13d-1-201ENSMUST00000103588 Frmpd1A2AKB4 1549 aa20.73■□□□□ 0.91
Trav13d-1-201ENSMUST00000103588 Phldb1Q6PDH0 1371 aaKnown RBP20.71■□□□□ 0.91
Trav13d-1-201ENSMUST00000103588 Ubl4bQ9CQ84 188 aa20.6■□□□□ 0.89
Trav13d-1-201ENSMUST00000103588 Baz1bQ9Z277 1479 aa20.55■□□□□ 0.88
Trav13d-1-201ENSMUST00000103588 Mrc2Q64449 1479 aa20.4■□□□□ 0.86
Trav13d-1-201ENSMUST00000103588 Unc13aQ4KUS2 1712 aa20.36■□□□□ 0.85
Trav13d-1-201ENSMUST00000103588 CftrP26361 1476 aa20.36■□□□□ 0.85
Trav13d-1-201ENSMUST00000103588 Cttnbp2B9EJA2 1648 aa20.31■□□□□ 0.84
Trav13d-1-201ENSMUST00000103588 Synj1Q8CHC4 1574 aa20.29■□□□□ 0.84
Trav13d-1-201ENSMUST00000103588 Brd4Q9ESU6 1400 aaKnown RBP20.27■□□□□ 0.84
Trav13d-1-201ENSMUST00000103588 Ccdc136Q3TVA9 1136 aa20.26■□□□□ 0.83
Trav13d-1-201ENSMUST00000103588 Rtl1Q7M732 1744 aa20.24■□□□□ 0.83
Trav13d-1-201ENSMUST00000103588 Esf1Q3V1V3 845 aaKnown RBP20.13■□□□□ 0.81
Trav13d-1-201ENSMUST00000103588 Trim41Q5NCC3 630 aa20.1■□□□□ 0.81
Trav13d-1-201ENSMUST00000103588 Cux2P70298 1426 aa20.02■□□□□ 0.79
Trav13d-1-201ENSMUST00000103588 Kif15Q6P9L6 1387 aa20■□□□□ 0.79
Trav13d-1-201ENSMUST00000103588 Rsf1E9PWW9 1441 aaKnown RBP20■□□□□ 0.79
Trav13d-1-201ENSMUST00000103588 Dnajc5P60904 198 aa19.98■□□□□ 0.79
Trav13d-1-201ENSMUST00000103588 Lrriq1Q0P5X1 1673 aa19.94■□□□□ 0.78
Trav13d-1-201ENSMUST00000103588 Npm1Q61937 292 aaKnown RBP19.85■□□□□ 0.77
Trav13d-1-201ENSMUST00000103588 Kif21aQ9QXL2 1672 aa19.84■□□□□ 0.77
Trav13d-1-201ENSMUST00000103588 Lamc3Q9R0B6 1581 aa19.78■□□□□ 0.76
Trav13d-1-201ENSMUST00000103588 Cep164Q5DU05 1446 aa19.7■□□□□ 0.74
Trav13d-1-201ENSMUST00000103588 Il27Q8K3I6 234 aa19.65■□□□□ 0.74
Trav13d-1-201ENSMUST00000103588 Eif4g3Q80XI3 1579 aaKnown RBP19.64■□□□□ 0.73
Trav13d-1-201ENSMUST00000103588 Dhx29Q6PGC1 1365 aaKnown RBP19.57■□□□□ 0.72
Trav13d-1-201ENSMUST00000103588 Urb2E9Q7L1 1524 aaKnown RBP19.57■□□□□ 0.72
Trav13d-1-201ENSMUST00000103588 Ccdc18Q640L5 1455 aa19.57■□□□□ 0.72
Trav13d-1-201ENSMUST00000103588 Shroom2A2ALU4 1481 aa19.54■□□□□ 0.72
Trav13d-1-201ENSMUST00000103588 Plb1Q3TTY0 1478 aa19.54■□□□□ 0.72
Trav13d-1-201ENSMUST00000103588 Cngb1E1AZ71 1325 aa19.53■□□□□ 0.72
Trav13d-1-201ENSMUST00000103588 LrpprcQ6PB66 1392 aaKnown RBP19.49■□□□□ 0.71
Trav13d-1-201ENSMUST00000103588 TnnQ80Z71 1560 aa19.47■□□□□ 0.71
Trav13d-1-201ENSMUST00000103588 Golga3P55937 1487 aa19.47■□□□□ 0.71
Trav13d-1-201ENSMUST00000103588 Crocc2F6XLV1 1638 aa19.43■□□□□ 0.7
Trav13d-1-201ENSMUST00000103588 Camsap1A2AHC3 1581 aa19.42■□□□□ 0.7
Trav13d-1-201ENSMUST00000103588 Top2bQ64511 1612 aa19.41■□□□□ 0.7
Trav13d-1-201ENSMUST00000103588 Pabpn1Q8CCS6 302 aaKnown RBP19.4■□□□□ 0.7
Trav13d-1-201ENSMUST00000103588 PogzQ8BZH4 1409 aaKnown RBP19.34■□□□□ 0.69
Trav13d-1-201ENSMUST00000103588 Pelp1Q9DBD5 1123 aaKnown RBP19.33■□□□□ 0.68
Trav13d-1-201ENSMUST00000103588 Ift140E9PY46 1464 aa19.33■□□□□ 0.68
Trav13d-1-201ENSMUST00000103588 Col17a1Q07563 1470 aa19.33■□□□□ 0.68
Trav13d-1-201ENSMUST00000103588 Rusc2Q80U22 1514 aa19.29■□□□□ 0.68
Trav13d-1-201ENSMUST00000103588 Fmn1Q05860 1466 aa19.28■□□□□ 0.68
Trav13d-1-201ENSMUST00000103588 Duox2A2AQ99 1517 aa19.25■□□□□ 0.67
Trav13d-1-201ENSMUST00000103588 Disp1Q3TDN0 1521 aa19.16■□□□□ 0.66
Trav13d-1-201ENSMUST00000103588 Grin2bQ01097 1482 aa19.16■□□□□ 0.66
Trav13d-1-201ENSMUST00000103588 Cc2d2bA0A286YDU8 1405 aa19.08■□□□□ 0.64
Trav13d-1-201ENSMUST00000103588 Samd9lQ69Z37 1561 aa19.06■□□□□ 0.64
Trav13d-1-201ENSMUST00000103588 Nup160Q9Z0W3 1402 aaKnown RBP19.06■□□□□ 0.64
Trav13d-1-201ENSMUST00000103588 Efcab5A0JP43 1406 aa19.05■□□□□ 0.64
Trav13d-1-201ENSMUST00000103588 Zcchc11B2RX14 1644 aaKnown RBP19.04■□□□□ 0.64
Trav13d-1-201ENSMUST00000103588 Pbrm1Q8BSQ9 1634 aaKnown RBP19■□□□□ 0.63
Trav13d-1-201ENSMUST00000103588 Rad54l2Q99NG0 1466 aa19■□□□□ 0.63
Trav13d-1-201ENSMUST00000103588 Setd1bQ8CFT2 1985 aa18.96■□□□□ 0.63
Trav13d-1-201ENSMUST00000103588 Grin2aP35436 1464 aa18.94■□□□□ 0.62
Trav13d-1-201ENSMUST00000103588 Fgd6Q69ZL1 1399 aa18.93■□□□□ 0.62
Trav13d-1-201ENSMUST00000103588 AqrQ8CFQ3 1481 aaKnown RBP18.92■□□□□ 0.62
Trav13d-1-201ENSMUST00000103588 Ccdc88bQ4QRL3 1481 aa18.91■□□□□ 0.62
Trav13d-1-201ENSMUST00000103588 Magi3Q9EQJ9 1476 aa18.9■□□□□ 0.62
Trav13d-1-201ENSMUST00000103588 Ttbk1Q6PCN3 1308 aa18.9■□□□□ 0.62
Trav13d-1-201ENSMUST00000103588 Adgrl3Q80TS3 1537 aa18.9■□□□□ 0.62
Trav13d-1-201ENSMUST00000103588 PtprkP35822 1457 aa18.89■□□□□ 0.61
Trav13d-1-201ENSMUST00000103588 NrkQ9R0G8 1455 aa18.87■□□□□ 0.61
Trav13d-1-201ENSMUST00000103588 Top2aQ01320 1528 aaKnown RBP18.84■□□□□ 0.61
Trav13d-1-201ENSMUST00000103588 Gapvd1Q6PAR5 1458 aa18.84■□□□□ 0.61
Trav13d-1-201ENSMUST00000103588 AknaQ80VW7 1404 aa18.83■□□□□ 0.61
Trav13d-1-201ENSMUST00000103588 Gm156Q58A37 223 aa18.83■□□□□ 0.6
Trav13d-1-201ENSMUST00000103588 Cep170Q6A065 1588 aa18.83■□□□□ 0.6
Trav13d-1-201ENSMUST00000103588 Zeb1Q64318 1117 aa18.81■□□□□ 0.6
Trav13d-1-201ENSMUST00000103588 Arhgef5E9Q7D5 1581 aa18.81■□□□□ 0.6
Trav13d-1-201ENSMUST00000103588 Pcdh10E9PXQ7 1057 aa18.8■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 99.1 ms