RNA–Protein interactions for RNA: ENSMUST00000102838.9

Sptbn1-203, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptbn1, Length 9,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-203ENSMUST00000102838 Rhox8Q6VSS7 320 aa15.51■□□□□ 0.07
Sptbn1-203ENSMUST00000102838 Ube2uB1AUC4 352 aa14.22□□□□□ -0.13
Sptbn1-203ENSMUST00000102838 Pelp1Q9DBD5 1123 aaKnown RBP14.22□□□□□ -0.13
Sptbn1-203ENSMUST00000102838 Cngb1E1AZ71 1325 aa14.16□□□□□ -0.14
Sptbn1-203ENSMUST00000102838 Zeb1Q64318 1117 aa14.04□□□□□ -0.16
Sptbn1-203ENSMUST00000102838 Esf1Q3V1V3 845 aaKnown RBP14.02□□□□□ -0.16
Sptbn1-203ENSMUST00000102838 Rpgrip1Q9EPQ2 1331 aa14.02□□□□□ -0.17
Sptbn1-203ENSMUST00000102838 Las1lA2BE28 776 aaKnown RBP13.99□□□□□ -0.17
Sptbn1-203ENSMUST00000102838 Npm2Q80W85 207 aa13.73□□□□□ -0.21
Sptbn1-203ENSMUST00000102838 Wdr66E9Q743 1299 aa13.72□□□□□ -0.21
Sptbn1-203ENSMUST00000102838 Amer1Q7TS75 1132 aa13.58□□□□□ -0.24
Sptbn1-203ENSMUST00000102838 Rtl1Q7M732 1744 aa13.53□□□□□ -0.24
Sptbn1-203ENSMUST00000102838 Ccdc136Q3TVA9 1136 aa13.41□□□□□ -0.26
Sptbn1-203ENSMUST00000102838 4930567H17RikQ3V0K5 233 aa13.4□□□□□ -0.26
Sptbn1-203ENSMUST00000102838 Myt1lP97500 1187 aa13.4□□□□□ -0.26
Sptbn1-203ENSMUST00000102838 Ehmt2Q9Z148 1263 aaKnown RBP13.35□□□□□ -0.27
Sptbn1-203ENSMUST00000102838 Trim41Q5NCC3 630 aa13.34□□□□□ -0.27
Sptbn1-203ENSMUST00000102838 Gab3Q8BSM5 595 aa13.28□□□□□ -0.28
Sptbn1-203ENSMUST00000102838 Stra8P70278 393 aa13.24□□□□□ -0.29
Sptbn1-203ENSMUST00000102838 Os9Q8K2C7 672 aa13.17□□□□□ -0.3
Sptbn1-203ENSMUST00000102838 Anp32bQ9EST5 272 aaKnown RBP13.16□□□□□ -0.3
Sptbn1-203ENSMUST00000102838 CenpbP27790 599 aa13.08□□□□□ -0.31
Sptbn1-203ENSMUST00000102838 NischQ80TM9 1593 aa13.07□□□□□ -0.32
Sptbn1-203ENSMUST00000102838 Gm13697A2AK42 830 aa13.03□□□□□ -0.32
Sptbn1-203ENSMUST00000102838 Slc24a1Q91WD8 1130 aa13.02□□□□□ -0.33
Sptbn1-203ENSMUST00000102838 NeflP08551 543 aa12.95□□□□□ -0.34
Sptbn1-203ENSMUST00000102838 Il27Q8K3I6 234 aa12.94□□□□□ -0.34
Sptbn1-203ENSMUST00000102838 DiexfQ8BTT6 772 aaKnown RBP12.94□□□□□ -0.34
Sptbn1-203ENSMUST00000102838 NclP09405 707 aaKnown RBP12.93□□□□□ -0.34
Sptbn1-203ENSMUST00000102838 Myt1Q8CFC2 1127 aa12.92□□□□□ -0.34
Sptbn1-203ENSMUST00000102838 HrcG5E8J6 738 aa12.91□□□□□ -0.34
Sptbn1-203ENSMUST00000102838 NrdcQ8BHG1 1161 aa12.86□□□□□ -0.35
Sptbn1-203ENSMUST00000102838 UbtfP25976 765 aaKnown RBP12.81□□□□□ -0.36
Sptbn1-203ENSMUST00000102838 Ttbk1Q6PCN3 1308 aa12.8□□□□□ -0.36
Sptbn1-203ENSMUST00000102838 Gm35339A0A140LHH9 1649 aa12.79□□□□□ -0.36
Sptbn1-203ENSMUST00000102838 Gm13695A2AK44 830 aa12.75□□□□□ -0.37
Sptbn1-203ENSMUST00000102838 Cdk11bP24788 784 aaKnown RBP12.74□□□□□ -0.37
Sptbn1-203ENSMUST00000102838 Neurod1Q60867 357 aa12.73□□□□□ -0.37
Sptbn1-203ENSMUST00000102838 Ccdc180J3QNE4 1664 aa12.72□□□□□ -0.37
Sptbn1-203ENSMUST00000102838 4933416C03RikQ3V063 378 aa12.7□□□□□ -0.38
Sptbn1-203ENSMUST00000102838 Fam50aQ9WV03 339 aaKnown RBP12.7□□□□□ -0.38
Sptbn1-203ENSMUST00000102838 NefmP08553 848 aa12.69□□□□□ -0.38
Sptbn1-203ENSMUST00000102838 Atp1b4Q99ME6 356 aa12.66□□□□□ -0.38
Sptbn1-203ENSMUST00000102838 Plppr3Q7TPB0 716 aa12.62□□□□□ -0.39
Sptbn1-203ENSMUST00000102838 Chic1Q8CBW7 227 aa12.6□□□□□ -0.39
Sptbn1-203ENSMUST00000102838 Hnrnpul2Q00PI9 745 aaKnown RBP12.59□□□□□ -0.39
Sptbn1-203ENSMUST00000102838 Ifnlr1Q8CGK5 535 aa12.58□□□□□ -0.4
Sptbn1-203ENSMUST00000102838 Hdac5Q9Z2V6 1113 aa12.57□□□□□ -0.4
Sptbn1-203ENSMUST00000102838 Acin1Q9JIX8 1338 aaKnown RBP12.56□□□□□ -0.4
Sptbn1-203ENSMUST00000102838 Ap3b1Q9Z1T1 1105 aa12.53□□□□□ -0.4
Sptbn1-203ENSMUST00000102838 Zbtb7cQ8VCZ7 619 aa12.52□□□□□ -0.41
Sptbn1-203ENSMUST00000102838 Safb2Q80YR5 991 aaKnown RBP12.47□□□□□ -0.41
Sptbn1-203ENSMUST00000102838 Eif5bQ05D44 1216 aaKnown RBP12.46□□□□□ -0.41
Sptbn1-203ENSMUST00000102838 Abcc9P70170 1546 aa12.45□□□□□ -0.42
Sptbn1-203ENSMUST00000102838 Npm1Q61937 292 aaKnown RBP12.45□□□□□ -0.42
Sptbn1-203ENSMUST00000102838 Erich6D3Z6S9 713 aa12.44□□□□□ -0.42
Sptbn1-203ENSMUST00000102838 Nlrp6Q91WS2 869 aa12.42□□□□□ -0.42
Sptbn1-203ENSMUST00000102838 Tnnt3Q9QZ47 272 aa12.4□□□□□ -0.42
Sptbn1-203ENSMUST00000102838 Rtl5Q5DTT4 599 aa12.39□□□□□ -0.43
Sptbn1-203ENSMUST00000102838 Znf326O88291 580 aa12.38□□□□□ -0.43
Sptbn1-203ENSMUST00000102838 Hsp90aa1P07901 733 aaKnown RBP12.32□□□□□ -0.44
Sptbn1-203ENSMUST00000102838 Polr3glQ8R0C0 218 aa12.26□□□□□ -0.45
Sptbn1-203ENSMUST00000102838 Ythdc1E9Q5K9 736 aaKnown RBP12.24□□□□□ -0.45
Sptbn1-203ENSMUST00000102838 CatipB9EKE5 520 aa12.23□□□□□ -0.45
Sptbn1-203ENSMUST00000102838 Zcchc6Q5BLK4 1491 aaKnown RBP12.2□□□□□ -0.46
Sptbn1-203ENSMUST00000102838 Prdm10Q3UTQ7 1184 aa12.19□□□□□ -0.46
Sptbn1-203ENSMUST00000102838 Zbtb4Q5F293 982 aa12.14□□□□□ -0.47
Sptbn1-203ENSMUST00000102838 Fkbp15Q6P9Q6 1216 aaKnown RBP12.12□□□□□ -0.47
Sptbn1-203ENSMUST00000102838 TonslQ6NZL6 1363 aa12.08□□□□□ -0.48
Sptbn1-203ENSMUST00000102838 Lmod2Q3UHZ5 550 aa12.07□□□□□ -0.48
Sptbn1-203ENSMUST00000102838 P3h3Q8CG70 732 aa12.06□□□□□ -0.48
Sptbn1-203ENSMUST00000102838 Upf2A2AT37 1269 aaKnown RBP12.04□□□□□ -0.48
Sptbn1-203ENSMUST00000102838 Nop58Q6DFW4 536 aaKnown RBP12.04□□□□□ -0.48
Sptbn1-203ENSMUST00000102838 Abcc8B2RUS7 1588 aa12.01□□□□□ -0.49
Sptbn1-203ENSMUST00000102838 Fgd1P52734 960 aa12□□□□□ -0.49
Sptbn1-203ENSMUST00000102838 DaxxO35613 739 aa11.99□□□□□ -0.49
Sptbn1-203ENSMUST00000102838 MyclP10166 368 aa11.98□□□□□ -0.49
Sptbn1-203ENSMUST00000102838 Ggt6Q6PDE7 497 aa11.92□□□□□ -0.5
Sptbn1-203ENSMUST00000102838 Clstn2Q9ER65 966 aa11.92□□□□□ -0.5
Sptbn1-203ENSMUST00000102838 Rangap1P46061 589 aaKnown RBP11.92□□□□□ -0.5
Sptbn1-203ENSMUST00000102838 Eif4g2Q62448 906 aaKnown RBP11.91□□□□□ -0.5
Sptbn1-203ENSMUST00000102838 ArxO35085 564 aa11.9□□□□□ -0.5
Sptbn1-203ENSMUST00000102838 Pcgf6Q99NA9 353 aa11.87□□□□□ -0.51
Sptbn1-203ENSMUST00000102838 PnnO35691 725 aaKnown RBP11.87□□□□□ -0.51
Sptbn1-203ENSMUST00000102838 Zfp777B9EKF4 885 aa11.84□□□□□ -0.51
Sptbn1-203ENSMUST00000102838 Slc4a1apE9PX68 744 aa11.83□□□□□ -0.51
Sptbn1-203ENSMUST00000102838 Irx6Q9ER75 438 aa11.83□□□□□ -0.52
Sptbn1-203ENSMUST00000102838 Ubl4bQ9CQ84 188 aa11.83□□□□□ -0.52
Sptbn1-203ENSMUST00000102838 Clstn1Q9EPL2 979 aa11.82□□□□□ -0.52
Sptbn1-203ENSMUST00000102838 Rtn4Q99P72 1162 aaKnown RBP11.81□□□□□ -0.52
Sptbn1-203ENSMUST00000102838 IqubQ8CDK3 788 aa11.8□□□□□ -0.52
Sptbn1-203ENSMUST00000102838 Anp32aO35381 247 aa11.8□□□□□ -0.52
Sptbn1-203ENSMUST00000102838 Dcaf1Q80TR8 1506 aa11.77□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 Plekhg3Q4VAC9 1341 aa11.77□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 Ppargc1bQ8VHJ7 1014 aa11.76□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 Dnai2A2AC93 623 aa11.76□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 Lmod3E9QA62 571 aa11.74□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 DekQ7TNV0 380 aaKnown RBP11.74□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 Ppm1fQ8CGA0 452 aa11.73□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 Ccer2J3QPU5 274 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms