RNA–Protein interactions for RNA: ENSMUST00000102667.4

Smcr8-202, Transcript of Guanine nucleotide exchange protein SMCR8, mousemouse

BASIC

Gene Smcr8, Length 3,544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8-202ENSMUST00000102667 NischQ80TM9 1593 aa15.11■□□□□ 0.01
Smcr8-202ENSMUST00000102667 Ehmt2Q9Z148 1263 aaKnown RBP14.67□□□□□ -0.06
Smcr8-202ENSMUST00000102667 Gm35339A0A140LHH9 1649 aa14.58□□□□□ -0.08
Smcr8-202ENSMUST00000102667 Abcc9P70170 1546 aa14.54□□□□□ -0.08
Smcr8-202ENSMUST00000102667 Rpgrip1Q9EPQ2 1331 aa14.51□□□□□ -0.09
Smcr8-202ENSMUST00000102667 Rhox8Q6VSS7 320 aa14.46□□□□□ -0.09
Smcr8-202ENSMUST00000102667 Abcc8B2RUS7 1588 aa14.33□□□□□ -0.12
Smcr8-202ENSMUST00000102667 Pcgf6Q99NA9 353 aa14.27□□□□□ -0.13
Smcr8-202ENSMUST00000102667 Acin1Q9JIX8 1338 aaKnown RBP14.13□□□□□ -0.15
Smcr8-202ENSMUST00000102667 Supt5hO55201 1082 aaKnown RBP13.91□□□□□ -0.18
Smcr8-202ENSMUST00000102667 Neurod1Q60867 357 aa13.85□□□□□ -0.19
Smcr8-202ENSMUST00000102667 Zeb1Q64318 1117 aa13.76□□□□□ -0.21
Smcr8-202ENSMUST00000102667 Las1lA2BE28 776 aaKnown RBP13.72□□□□□ -0.21
Smcr8-202ENSMUST00000102667 Gm38655A0A286YDK6 273 aa13.53□□□□□ -0.24
Smcr8-202ENSMUST00000102667 Csrnp3P59055 597 aa13.53□□□□□ -0.24
Smcr8-202ENSMUST00000102667 1700123L14RikQ3V2K7 440 aa13.53□□□□□ -0.24
Smcr8-202ENSMUST00000102667 CenpbP27790 599 aa13.5□□□□□ -0.25
Smcr8-202ENSMUST00000102667 ScribQ80U72 1612 aa13.46□□□□□ -0.25
Smcr8-202ENSMUST00000102667 Cngb1E1AZ71 1325 aa13.46□□□□□ -0.26
Smcr8-202ENSMUST00000102667 DiexfQ8BTT6 772 aaKnown RBP13.44□□□□□ -0.26
Smcr8-202ENSMUST00000102667 Ppargc1bQ8VHJ7 1014 aa13.39□□□□□ -0.27
Smcr8-202ENSMUST00000102667 Ccdc136Q3TVA9 1136 aa13.34□□□□□ -0.27
Smcr8-202ENSMUST00000102667 Wdr66E9Q743 1299 aa13.32□□□□□ -0.28
Smcr8-202ENSMUST00000102667 Ccdc180J3QNE4 1664 aa13.28□□□□□ -0.28
Smcr8-202ENSMUST00000102667 Trim41Q5NCC3 630 aa13.28□□□□□ -0.28
Smcr8-202ENSMUST00000102667 Sall2Q9QX96 1004 aa13.25□□□□□ -0.29
Smcr8-202ENSMUST00000102667 Kdm5dQ62240 1548 aa13.24□□□□□ -0.29
Smcr8-202ENSMUST00000102667 Rb1cc1Q9ESK9 1588 aa13.23□□□□□ -0.29
Smcr8-202ENSMUST00000102667 Bcl11aQ9QYE3 773 aa13.14□□□□□ -0.31
Smcr8-202ENSMUST00000102667 Anks4bQ8K3X6 423 aa13.13□□□□□ -0.31
Smcr8-202ENSMUST00000102667 NacadQ5SWP3 1504 aa13.12□□□□□ -0.31
Smcr8-202ENSMUST00000102667 Dcaf1Q80TR8 1506 aa13.12□□□□□ -0.31
Smcr8-202ENSMUST00000102667 Myt1Q8CFC2 1127 aa13.11□□□□□ -0.31
Smcr8-202ENSMUST00000102667 Rtl1Q7M732 1744 aa13.09□□□□□ -0.31
Smcr8-202ENSMUST00000102667 Zcchc6Q5BLK4 1491 aaKnown RBP13.08□□□□□ -0.31
Smcr8-202ENSMUST00000102667 Cdk11bP24788 784 aaKnown RBP13.06□□□□□ -0.32
Smcr8-202ENSMUST00000102667 Gab3Q8BSM5 595 aa13.05□□□□□ -0.32
Smcr8-202ENSMUST00000102667 Nop58Q6DFW4 536 aaKnown RBP13.02□□□□□ -0.32
Smcr8-202ENSMUST00000102667 Mapk8ip2Q9ERE9 830 aa12.99□□□□□ -0.33
Smcr8-202ENSMUST00000102667 Baz1aO88379 1555 aa12.99□□□□□ -0.33
Smcr8-202ENSMUST00000102667 PrkcshO08795 521 aa12.98□□□□□ -0.33
Smcr8-202ENSMUST00000102667 HrcG5E8J6 738 aa12.97□□□□□ -0.33
Smcr8-202ENSMUST00000102667 Aplp2Q06335 707 aa12.97□□□□□ -0.33
Smcr8-202ENSMUST00000102667 Mier1Q5UAK0 511 aa12.92□□□□□ -0.34
Smcr8-202ENSMUST00000102667 Ttbk1Q6PCN3 1308 aa12.91□□□□□ -0.34
Smcr8-202ENSMUST00000102667 Fam71e1A1L3C1 212 aa12.91□□□□□ -0.34
Smcr8-202ENSMUST00000102667 NefmP08553 848 aa12.91□□□□□ -0.34
Smcr8-202ENSMUST00000102667 Ifnlr1Q8CGK5 535 aa12.91□□□□□ -0.34
Smcr8-202ENSMUST00000102667 Aebp2Q9Z248 504 aaKnown RBP12.85□□□□□ -0.35
Smcr8-202ENSMUST00000102667 Sycp2Q9CUU3 1500 aa12.83□□□□□ -0.35
Smcr8-202ENSMUST00000102667 SafbD3YXK2 937 aaKnown RBP12.82□□□□□ -0.36
Smcr8-202ENSMUST00000102667 Amer1Q7TS75 1132 aa12.82□□□□□ -0.36
Smcr8-202ENSMUST00000102667 UbtfP25976 765 aaKnown RBP12.78□□□□□ -0.36
Smcr8-202ENSMUST00000102667 Ap3b1Q9Z1T1 1105 aa12.7□□□□□ -0.38
Smcr8-202ENSMUST00000102667 Esf1Q3V1V3 845 aaKnown RBP12.68□□□□□ -0.38
Smcr8-202ENSMUST00000102667 Smarca2Q6DIC0 1577 aa12.64□□□□□ -0.39
Smcr8-202ENSMUST00000102667 Hnrnpul2Q00PI9 745 aaKnown RBP12.63□□□□□ -0.39
Smcr8-202ENSMUST00000102667 Cecr2E9Q2Z1 1453 aa12.63□□□□□ -0.39
Smcr8-202ENSMUST00000102667 Crybg2B7ZCC2 1516 aa12.62□□□□□ -0.39
Smcr8-202ENSMUST00000102667 ClspnQ80YR7 1315 aa12.6□□□□□ -0.39
Smcr8-202ENSMUST00000102667 BicraF8VPZ9 1578 aa12.58□□□□□ -0.4
Smcr8-202ENSMUST00000102667 Slc24a1Q91WD8 1130 aa12.53□□□□□ -0.4
Smcr8-202ENSMUST00000102667 Brd4Q9ESU6 1400 aaKnown RBP12.49□□□□□ -0.41
Smcr8-202ENSMUST00000102667 Chic1Q8CBW7 227 aa12.47□□□□□ -0.41
Smcr8-202ENSMUST00000102667 Pelp1Q9DBD5 1123 aaKnown RBP12.43□□□□□ -0.42
Smcr8-202ENSMUST00000102667 Anp32aO35381 247 aa12.41□□□□□ -0.42
Smcr8-202ENSMUST00000102667 TonslQ6NZL6 1363 aa12.41□□□□□ -0.42
Smcr8-202ENSMUST00000102667 Myt1lP97500 1187 aa12.39□□□□□ -0.43
Smcr8-202ENSMUST00000102667 Tnnt3Q9QZ47 272 aa12.38□□□□□ -0.43
Smcr8-202ENSMUST00000102667 Synj1Q8CHC4 1574 aa12.38□□□□□ -0.43
Smcr8-202ENSMUST00000102667 Eid3Q3V124 375 aa12.34□□□□□ -0.43
Smcr8-202ENSMUST00000102667 CftrP26361 1476 aa12.33□□□□□ -0.44
Smcr8-202ENSMUST00000102667 Eif5bQ05D44 1216 aaKnown RBP12.33□□□□□ -0.44
Smcr8-202ENSMUST00000102667 Hdac5Q9Z2V6 1113 aa12.32□□□□□ -0.44
Smcr8-202ENSMUST00000102667 Rsf1E9PWW9 1441 aaKnown RBP12.32□□□□□ -0.44
Smcr8-202ENSMUST00000102667 Nolc1E9Q5C9 702 aaKnown RBP12.29□□□□□ -0.44
Smcr8-202ENSMUST00000102667 Golga3P55937 1487 aa12.28□□□□□ -0.44
Smcr8-202ENSMUST00000102667 Ccdc88bQ4QRL3 1481 aa12.28□□□□□ -0.44
Smcr8-202ENSMUST00000102667 Cep164Q5DU05 1446 aa12.26□□□□□ -0.45
Smcr8-202ENSMUST00000102667 Ppp4r2Q0VGB7 417 aa12.24□□□□□ -0.45
Smcr8-202ENSMUST00000102667 Smarca4Q3TKT4 1613 aaKnown RBP12.24□□□□□ -0.45
Smcr8-202ENSMUST00000102667 Il27Q8K3I6 234 aa12.24□□□□□ -0.45
Smcr8-202ENSMUST00000102667 Calr4Q3TQS0 420 aa12.22□□□□□ -0.45
Smcr8-202ENSMUST00000102667 4933416C03RikQ3V063 378 aa12.22□□□□□ -0.45
Smcr8-202ENSMUST00000102667 Rtl5Q5DTT4 599 aa12.17□□□□□ -0.46
Smcr8-202ENSMUST00000102667 Plcd4Q8K3R3 807 aa12.17□□□□□ -0.46
Smcr8-202ENSMUST00000102667 Supt16hQ920B9 1047 aa12.16□□□□□ -0.46
Smcr8-202ENSMUST00000102667 Cttnbp2B9EJA2 1648 aa12.15□□□□□ -0.46
Smcr8-202ENSMUST00000102667 Iqgap2Q3UQ44 1575 aa12.15□□□□□ -0.46
Smcr8-202ENSMUST00000102667 Plekhg3Q4VAC9 1341 aa12.14□□□□□ -0.47
Smcr8-202ENSMUST00000102667 Npm2Q80W85 207 aa12.14□□□□□ -0.47
Smcr8-202ENSMUST00000102667 Atad2bE9Q166 1460 aaKnown RBP12.14□□□□□ -0.47
Smcr8-202ENSMUST00000102667 Pds5bQ4VA53 1446 aaKnown RBP12.14□□□□□ -0.47
Smcr8-202ENSMUST00000102667 Pknox2Q8BG99 474 aa12.1□□□□□ -0.47
Smcr8-202ENSMUST00000102667 P3h3Q8CG70 732 aa12.1□□□□□ -0.47
Smcr8-202ENSMUST00000102667 DaxxO35613 739 aa12.09□□□□□ -0.47
Smcr8-202ENSMUST00000102667 NclP09405 707 aaKnown RBP12.09□□□□□ -0.47
Smcr8-202ENSMUST00000102667 Stra8P70278 393 aa12.08□□□□□ -0.48
Smcr8-202ENSMUST00000102667 Slc4a3P16283 1227 aa12.07□□□□□ -0.48
Smcr8-202ENSMUST00000102667 Gtf3c3Q3TMP1 882 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 97.1 ms