RNA–Protein interactions for RNA: ENSMUST00000102601.9

Trappc1-202, Transcript of Trafficking protein particle complex subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trappc1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc1-202ENSMUST00000102601 Abcc9P70170 1546 aa21.04■□□□□ 0.96
Trappc1-202ENSMUST00000102601 Gm35339A0A140LHH9 1649 aa20.82■□□□□ 0.92
Trappc1-202ENSMUST00000102601 Dnajc5bQ9CQ94 199 aa20.43■□□□□ 0.86
Trappc1-202ENSMUST00000102601 NischQ80TM9 1593 aa20.08■□□□□ 0.81
Trappc1-202ENSMUST00000102601 ScribQ80U72 1612 aa19.95■□□□□ 0.78
Trappc1-202ENSMUST00000102601 Abcc8B2RUS7 1588 aa19.79■□□□□ 0.76
Trappc1-202ENSMUST00000102601 Dnajc5P60904 198 aa19.66■□□□□ 0.74
Trappc1-202ENSMUST00000102601 NacadQ5SWP3 1504 aa19.03■□□□□ 0.64
Trappc1-202ENSMUST00000102601 Kdm5dQ62240 1548 aa18.95■□□□□ 0.62
Trappc1-202ENSMUST00000102601 Mapk8ip2Q9ERE9 830 aa18.92■□□□□ 0.62
Trappc1-202ENSMUST00000102601 Trim41Q5NCC3 630 aa18.89■□□□□ 0.61
Trappc1-202ENSMUST00000102601 Chic1Q8CBW7 227 aa18.84■□□□□ 0.61
Trappc1-202ENSMUST00000102601 Thoc2B1AZI6 1594 aaKnown RBP18.83■□□□□ 0.6
Trappc1-202ENSMUST00000102601 BicraF8VPZ9 1578 aa18.78■□□□□ 0.6
Trappc1-202ENSMUST00000102601 Sycp2Q9CUU3 1500 aa18.74■□□□□ 0.59
Trappc1-202ENSMUST00000102601 Cc2d2aQ8CFW7 1633 aa18.52■□□□□ 0.55
Trappc1-202ENSMUST00000102601 Pds5bQ4VA53 1446 aaKnown RBP18.42■□□□□ 0.54
Trappc1-202ENSMUST00000102601 Fam135aQ6NS59 1506 aa18.09■□□□□ 0.49
Trappc1-202ENSMUST00000102601 Ercc6F8VPZ5 1481 aa18.03■□□□□ 0.48
Trappc1-202ENSMUST00000102601 Atad2bE9Q166 1460 aaKnown RBP17.99■□□□□ 0.47
Trappc1-202ENSMUST00000102601 Dcaf1Q80TR8 1506 aa17.89■□□□□ 0.45
Trappc1-202ENSMUST00000102601 Col17a1Q07563 1470 aa17.78■□□□□ 0.44
Trappc1-202ENSMUST00000102601 Mrc2Q64449 1479 aa17.69■□□□□ 0.42
Trappc1-202ENSMUST00000102601 Phldb1Q6PDH0 1371 aaKnown RBP17.68■□□□□ 0.42
Trappc1-202ENSMUST00000102601 Ubl4bQ9CQ84 188 aa17.68■□□□□ 0.42
Trappc1-202ENSMUST00000102601 Shroom2A2ALU4 1481 aa17.68■□□□□ 0.42
Trappc1-202ENSMUST00000102601 Smarca2Q6DIC0 1577 aa17.66■□□□□ 0.42
Trappc1-202ENSMUST00000102601 Pcdh10E9PXQ7 1057 aa17.64■□□□□ 0.41
Trappc1-202ENSMUST00000102601 Baz1bQ9Z277 1479 aa17.63■□□□□ 0.41
Trappc1-202ENSMUST00000102601 Rb1cc1Q9ESK9 1588 aa17.53■□□□□ 0.4
Trappc1-202ENSMUST00000102601 Frmpd1A2AKB4 1549 aa17.52■□□□□ 0.4
Trappc1-202ENSMUST00000102601 Wdr62Q3U3T8 1523 aa17.52■□□□□ 0.39
Trappc1-202ENSMUST00000102601 Iqgap2Q3UQ44 1575 aa17.47■□□□□ 0.39
Trappc1-202ENSMUST00000102601 Cypt1Q8CH20 168 aa17.46■□□□□ 0.39
Trappc1-202ENSMUST00000102601 Lrriq1Q0P5X1 1673 aa17.45■□□□□ 0.38
Trappc1-202ENSMUST00000102601 Rsf1E9PWW9 1441 aaKnown RBP17.39■□□□□ 0.38
Trappc1-202ENSMUST00000102601 Smarca4Q3TKT4 1613 aaKnown RBP17.34■□□□□ 0.37
Trappc1-202ENSMUST00000102601 Pabpn1Q8CCS6 302 aaKnown RBP17.31■□□□□ 0.36
Trappc1-202ENSMUST00000102601 Top2bQ64511 1612 aa17.26■□□□□ 0.35
Trappc1-202ENSMUST00000102601 Unc13aQ4KUS2 1712 aa17.24■□□□□ 0.35
Trappc1-202ENSMUST00000102601 Pelp1Q9DBD5 1123 aaKnown RBP17.17■□□□□ 0.34
Trappc1-202ENSMUST00000102601 Arhgef5E9Q7D5 1581 aa17.16■□□□□ 0.34
Trappc1-202ENSMUST00000102601 Cecr2E9Q2Z1 1453 aa17.16■□□□□ 0.34
Trappc1-202ENSMUST00000102601 Eif4g3Q80XI3 1579 aaKnown RBP17.14■□□□□ 0.33
Trappc1-202ENSMUST00000102601 Zcchc6Q5BLK4 1491 aaKnown RBP17.12■□□□□ 0.33
Trappc1-202ENSMUST00000102601 Zcchc11B2RX14 1644 aaKnown RBP17.1■□□□□ 0.33
Trappc1-202ENSMUST00000102601 Baz1aO88379 1555 aa17.02■□□□□ 0.32
Trappc1-202ENSMUST00000102601 Ttbk1Q6PCN3 1308 aa17■□□□□ 0.31
Trappc1-202ENSMUST00000102601 Crybg2B7ZCC2 1516 aa17■□□□□ 0.31
Trappc1-202ENSMUST00000102601 Kif21aQ9QXL2 1672 aa16.96■□□□□ 0.31
Trappc1-202ENSMUST00000102601 Plekhg3Q4VAC9 1341 aa16.95■□□□□ 0.3
Trappc1-202ENSMUST00000102601 Phf23Q8BSN5 401 aa16.88■□□□□ 0.29
Trappc1-202ENSMUST00000102601 Adgrl3Q80TS3 1537 aa16.79■□□□□ 0.28
Trappc1-202ENSMUST00000102601 Cux2P70298 1426 aa16.77■□□□□ 0.27
Trappc1-202ENSMUST00000102601 Plb1Q3TTY0 1478 aa16.73■□□□□ 0.27
Trappc1-202ENSMUST00000102601 PtprtQ99M80 1454 aa16.68■□□□□ 0.26
Trappc1-202ENSMUST00000102601 Urb2E9Q7L1 1524 aaKnown RBP16.65■□□□□ 0.26
Trappc1-202ENSMUST00000102601 Ccdc180J3QNE4 1664 aa16.62■□□□□ 0.25
Trappc1-202ENSMUST00000102601 Gm156Q58A37 223 aa16.58■□□□□ 0.24
Trappc1-202ENSMUST00000102601 Fbxo41Q6NS60 873 aa16.54■□□□□ 0.24
Trappc1-202ENSMUST00000102601 PtprkP35822 1457 aa16.53■□□□□ 0.24
Trappc1-202ENSMUST00000102601 Cep170Q6A065 1588 aa16.5■□□□□ 0.23
Trappc1-202ENSMUST00000102601 Kif15Q6P9L6 1387 aa16.49■□□□□ 0.23
Trappc1-202ENSMUST00000102601 Npm1Q61937 292 aaKnown RBP16.48■□□□□ 0.23
Trappc1-202ENSMUST00000102601 Rusc2Q80U22 1514 aa16.48■□□□□ 0.23
Trappc1-202ENSMUST00000102601 Pprc1Q6NZN1 1644 aa16.44■□□□□ 0.22
Trappc1-202ENSMUST00000102601 Cyb5rlB1AS42 316 aa16.42■□□□□ 0.22
Trappc1-202ENSMUST00000102601 Gapvd1Q6PAR5 1458 aa16.39■□□□□ 0.21
Trappc1-202ENSMUST00000102601 Dhx29Q6PGC1 1365 aaKnown RBP16.32■□□□□ 0.2
Trappc1-202ENSMUST00000102601 CftrP26361 1476 aa16.29■□□□□ 0.2
Trappc1-202ENSMUST00000102601 Cep164Q5DU05 1446 aa16.28■□□□□ 0.2
Trappc1-202ENSMUST00000102601 Alpk3Q924C5 1678 aa16.27■□□□□ 0.2
Trappc1-202ENSMUST00000102601 Hecw2Q6I6G8 1578 aa16.26■□□□□ 0.19
Trappc1-202ENSMUST00000102601 Ppp1r18Q8BQ30 594 aa16.26■□□□□ 0.19
Trappc1-202ENSMUST00000102601 Cttnbp2B9EJA2 1648 aa16.26■□□□□ 0.19
Trappc1-202ENSMUST00000102601 Ercc6l2Q9JIM3 1537 aa16.24■□□□□ 0.19
Trappc1-202ENSMUST00000102601 Plppr3Q7TPB0 716 aa16.22■□□□□ 0.19
Trappc1-202ENSMUST00000102601 Ift140E9PY46 1464 aa16.21■□□□□ 0.19
Trappc1-202ENSMUST00000102601 Rhox8Q6VSS7 320 aa16.2■□□□□ 0.18
Trappc1-202ENSMUST00000102601 Crocc2F6XLV1 1638 aa16.18■□□□□ 0.18
Trappc1-202ENSMUST00000102601 Synj1Q8CHC4 1574 aa16.17■□□□□ 0.18
Trappc1-202ENSMUST00000102601 Rapgef2Q8CHG7 1496 aa16.16■□□□□ 0.18
Trappc1-202ENSMUST00000102601 Ccdc88bQ4QRL3 1481 aa16.15■□□□□ 0.18
Trappc1-202ENSMUST00000102601 GapdhsQ64467 440 aa16.11■□□□□ 0.17
Trappc1-202ENSMUST00000102601 MlecQ6ZQI3 291 aaKnown RBP16.11■□□□□ 0.17
Trappc1-202ENSMUST00000102601 Il27Q8K3I6 234 aa16.1■□□□□ 0.17
Trappc1-202ENSMUST00000102601 Ythdc2B2RR83 1445 aaKnown RBP16.07■□□□□ 0.16
Trappc1-202ENSMUST00000102601 Lamc3Q9R0B6 1581 aa16.07■□□□□ 0.16
Trappc1-202ENSMUST00000102601 Setbp1Q9Z180 1582 aa16.07■□□□□ 0.16
Trappc1-202ENSMUST00000102601 Ecm2Q5FW85 670 aa16.04■□□□□ 0.16
Trappc1-202ENSMUST00000102601 LrpprcQ6PB66 1392 aaKnown RBP16.01■□□□□ 0.15
Trappc1-202ENSMUST00000102601 Camsap1A2AHC3 1581 aa16■□□□□ 0.15
Trappc1-202ENSMUST00000102601 Brwd3A2AHJ4 1799 aa16■□□□□ 0.15
Trappc1-202ENSMUST00000102601 Fgd6Q69ZL1 1399 aa16■□□□□ 0.15
Trappc1-202ENSMUST00000102601 Esf1Q3V1V3 845 aaKnown RBP15.99■□□□□ 0.15
Trappc1-202ENSMUST00000102601 Arhgef11Q68FM7 1552 aa15.97■□□□□ 0.15
Trappc1-202ENSMUST00000102601 Abcc1O35379 1528 aa15.96■□□□□ 0.15
Trappc1-202ENSMUST00000102601 Disp1Q3TDN0 1521 aa15.96■□□□□ 0.15
Trappc1-202ENSMUST00000102601 Gab3Q8BSM5 595 aa15.96■□□□□ 0.15
Trappc1-202ENSMUST00000102601 AknaQ80VW7 1404 aa15.95■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms