RNA–Protein interactions for RNA: ENSMUST00000100640.4

Sqle-202, Transcript of Squalene monooxygenase, mousemouse

TSL 1 (best) BASIC

Gene Sqle, Length 2,636 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqle-202ENSMUST00000100640 NischQ80TM9 1593 aa21.91■■□□□ 1.1
Sqle-202ENSMUST00000100640 Gm35339A0A140LHH9 1649 aa21.78■■□□□ 1.08
Sqle-202ENSMUST00000100640 Abcc9P70170 1546 aa21.26■□□□□ 0.99
Sqle-202ENSMUST00000100640 Rhox8Q6VSS7 320 aa21.1■□□□□ 0.97
Sqle-202ENSMUST00000100640 Rtl1Q7M732 1744 aa21.07■□□□□ 0.96
Sqle-202ENSMUST00000100640 Rpgrip1Q9EPQ2 1331 aa21.01■□□□□ 0.95
Sqle-202ENSMUST00000100640 Ccdc180J3QNE4 1664 aa20.87■□□□□ 0.93
Sqle-202ENSMUST00000100640 Abcc8B2RUS7 1588 aa20.85■□□□□ 0.93
Sqle-202ENSMUST00000100640 Acin1Q9JIX8 1338 aaKnown RBP20.42■□□□□ 0.86
Sqle-202ENSMUST00000100640 Zcchc6Q5BLK4 1491 aaKnown RBP20.2■□□□□ 0.82
Sqle-202ENSMUST00000100640 Ehmt2Q9Z148 1263 aaKnown RBP20.07■□□□□ 0.8
Sqle-202ENSMUST00000100640 Pcgf6Q99NA9 353 aa19.97■□□□□ 0.79
Sqle-202ENSMUST00000100640 ScribQ80U72 1612 aa19.94■□□□□ 0.78
Sqle-202ENSMUST00000100640 Dcaf1Q80TR8 1506 aa19.89■□□□□ 0.78
Sqle-202ENSMUST00000100640 HrcG5E8J6 738 aa19.89■□□□□ 0.77
Sqle-202ENSMUST00000100640 Ccdc136Q3TVA9 1136 aa19.5■□□□□ 0.71
Sqle-202ENSMUST00000100640 Supt5hO55201 1082 aaKnown RBP19.45■□□□□ 0.7
Sqle-202ENSMUST00000100640 Trim41Q5NCC3 630 aa19.45■□□□□ 0.7
Sqle-202ENSMUST00000100640 Kdm5dQ62240 1548 aa19.34■□□□□ 0.69
Sqle-202ENSMUST00000100640 NacadQ5SWP3 1504 aa19.3■□□□□ 0.68
Sqle-202ENSMUST00000100640 Rb1cc1Q9ESK9 1588 aa19.24■□□□□ 0.67
Sqle-202ENSMUST00000100640 Neurod1Q60867 357 aa19.23■□□□□ 0.67
Sqle-202ENSMUST00000100640 Cep164Q5DU05 1446 aa19.08■□□□□ 0.65
Sqle-202ENSMUST00000100640 Baz1aO88379 1555 aa19.02■□□□□ 0.63
Sqle-202ENSMUST00000100640 Las1lA2BE28 776 aaKnown RBP19.01■□□□□ 0.63
Sqle-202ENSMUST00000100640 Zeb1Q64318 1117 aa19■□□□□ 0.63
Sqle-202ENSMUST00000100640 Sycp2Q9CUU3 1500 aa18.92■□□□□ 0.62
Sqle-202ENSMUST00000100640 NefmP08553 848 aa18.9■□□□□ 0.62
Sqle-202ENSMUST00000100640 Cngb1E1AZ71 1325 aa18.86■□□□□ 0.61
Sqle-202ENSMUST00000100640 Sall2Q9QX96 1004 aa18.79■□□□□ 0.6
Sqle-202ENSMUST00000100640 Mier1Q5UAK0 511 aa18.75■□□□□ 0.59
Sqle-202ENSMUST00000100640 Anks4bQ8K3X6 423 aa18.7■□□□□ 0.58
Sqle-202ENSMUST00000100640 Gab3Q8BSM5 595 aa18.7■□□□□ 0.58
Sqle-202ENSMUST00000100640 1700123L14RikQ3V2K7 440 aa18.68■□□□□ 0.58
Sqle-202ENSMUST00000100640 Chic1Q8CBW7 227 aa18.65■□□□□ 0.58
Sqle-202ENSMUST00000100640 BicraF8VPZ9 1578 aa18.63■□□□□ 0.57
Sqle-202ENSMUST00000100640 Rsf1E9PWW9 1441 aaKnown RBP18.63■□□□□ 0.57
Sqle-202ENSMUST00000100640 Smarca2Q6DIC0 1577 aa18.63■□□□□ 0.57
Sqle-202ENSMUST00000100640 Csrnp3P59055 597 aa18.61■□□□□ 0.57
Sqle-202ENSMUST00000100640 Crybg2B7ZCC2 1516 aa18.49■□□□□ 0.55
Sqle-202ENSMUST00000100640 Wdr66E9Q743 1299 aa18.44■□□□□ 0.54
Sqle-202ENSMUST00000100640 Ccdc88bQ4QRL3 1481 aa18.41■□□□□ 0.54
Sqle-202ENSMUST00000100640 Cdk11bP24788 784 aaKnown RBP18.39■□□□□ 0.53
Sqle-202ENSMUST00000100640 Aebp2Q9Z248 504 aaKnown RBP18.37■□□□□ 0.53
Sqle-202ENSMUST00000100640 CenpbP27790 599 aa18.37■□□□□ 0.53
Sqle-202ENSMUST00000100640 Aplp2Q06335 707 aa18.37■□□□□ 0.53
Sqle-202ENSMUST00000100640 Myt1Q8CFC2 1127 aa18.37■□□□□ 0.53
Sqle-202ENSMUST00000100640 Nop58Q6DFW4 536 aaKnown RBP18.35■□□□□ 0.53
Sqle-202ENSMUST00000100640 ClspnQ80YR7 1315 aa18.3■□□□□ 0.52
Sqle-202ENSMUST00000100640 Golga3P55937 1487 aa18.29■□□□□ 0.52
Sqle-202ENSMUST00000100640 Brd4Q9ESU6 1400 aaKnown RBP18.29■□□□□ 0.52
Sqle-202ENSMUST00000100640 UbtfP25976 765 aaKnown RBP18.27■□□□□ 0.52
Sqle-202ENSMUST00000100640 Ppargc1bQ8VHJ7 1014 aa18.18■□□□□ 0.5
Sqle-202ENSMUST00000100640 Cecr2E9Q2Z1 1453 aa18.09■□□□□ 0.49
Sqle-202ENSMUST00000100640 Gm38655A0A286YDK6 273 aa18.08■□□□□ 0.49
Sqle-202ENSMUST00000100640 TonslQ6NZL6 1363 aa18.07■□□□□ 0.48
Sqle-202ENSMUST00000100640 Synj1Q8CHC4 1574 aa18.04■□□□□ 0.48
Sqle-202ENSMUST00000100640 Esf1Q3V1V3 845 aaKnown RBP18.04■□□□□ 0.48
Sqle-202ENSMUST00000100640 Pds5bQ4VA53 1446 aaKnown RBP17.97■□□□□ 0.47
Sqle-202ENSMUST00000100640 Rapgef2Q8CHG7 1496 aa17.94■□□□□ 0.46
Sqle-202ENSMUST00000100640 Top2bQ64511 1612 aa17.92■□□□□ 0.46
Sqle-202ENSMUST00000100640 Smarca4Q3TKT4 1613 aaKnown RBP17.9■□□□□ 0.46
Sqle-202ENSMUST00000100640 Atad2bE9Q166 1460 aaKnown RBP17.89■□□□□ 0.45
Sqle-202ENSMUST00000100640 Myt1lP97500 1187 aa17.87■□□□□ 0.45
Sqle-202ENSMUST00000100640 CftrP26361 1476 aa17.87■□□□□ 0.45
Sqle-202ENSMUST00000100640 Cep162Q6ZQ06 1403 aa17.81■□□□□ 0.44
Sqle-202ENSMUST00000100640 Tnnt3Q9QZ47 272 aa17.78■□□□□ 0.44
Sqle-202ENSMUST00000100640 Fam71e1A1L3C1 212 aa17.77■□□□□ 0.44
Sqle-202ENSMUST00000100640 Cc2d2aQ8CFW7 1633 aa17.77■□□□□ 0.43
Sqle-202ENSMUST00000100640 Hnrnpul2Q00PI9 745 aaKnown RBP17.76■□□□□ 0.43
Sqle-202ENSMUST00000100640 Iqgap2Q3UQ44 1575 aa17.76■□□□□ 0.43
Sqle-202ENSMUST00000100640 DiexfQ8BTT6 772 aaKnown RBP17.75■□□□□ 0.43
Sqle-202ENSMUST00000100640 Thoc2B1AZI6 1594 aaKnown RBP17.74■□□□□ 0.43
Sqle-202ENSMUST00000100640 Plekhg3Q4VAC9 1341 aa17.73■□□□□ 0.43
Sqle-202ENSMUST00000100640 SafbD3YXK2 937 aaKnown RBP17.72■□□□□ 0.43
Sqle-202ENSMUST00000100640 Ncapd3Q6ZQK0 1506 aa17.71■□□□□ 0.43
Sqle-202ENSMUST00000100640 Clip1Q922J3 1391 aa17.7■□□□□ 0.42
Sqle-202ENSMUST00000100640 Mapk8ip2Q9ERE9 830 aa17.69■□□□□ 0.42
Sqle-202ENSMUST00000100640 Top2aQ01320 1528 aaKnown RBP17.69■□□□□ 0.42
Sqle-202ENSMUST00000100640 Cttnbp2B9EJA2 1648 aa17.69■□□□□ 0.42
Sqle-202ENSMUST00000100640 Fmn1Q05860 1466 aa17.68■□□□□ 0.42
Sqle-202ENSMUST00000100640 Npm2Q80W85 207 aa17.67■□□□□ 0.42
Sqle-202ENSMUST00000100640 Dnajc5bQ9CQ94 199 aa17.67■□□□□ 0.42
Sqle-202ENSMUST00000100640 Bcl11aQ9QYE3 773 aa17.63■□□□□ 0.41
Sqle-202ENSMUST00000100640 Ercc6F8VPZ5 1481 aa17.62■□□□□ 0.41
Sqle-202ENSMUST00000100640 Ap3b1Q9Z1T1 1105 aa17.61■□□□□ 0.41
Sqle-202ENSMUST00000100640 Eid3Q3V124 375 aa17.58■□□□□ 0.4
Sqle-202ENSMUST00000100640 Wdr62Q3U3T8 1523 aa17.55■□□□□ 0.4
Sqle-202ENSMUST00000100640 Frmpd1A2AKB4 1549 aa17.54■□□□□ 0.4
Sqle-202ENSMUST00000100640 Anp32aO35381 247 aa17.5■□□□□ 0.39
Sqle-202ENSMUST00000100640 Eif4g1Q6NZJ6 1600 aaKnown RBP17.47■□□□□ 0.39
Sqle-202ENSMUST00000100640 Stra8P70278 393 aa17.46■□□□□ 0.39
Sqle-202ENSMUST00000100640 Znf710Q3U288 666 aa17.45■□□□□ 0.38
Sqle-202ENSMUST00000100640 Kdm5bQ80Y84 1544 aa17.44■□□□□ 0.38
Sqle-202ENSMUST00000100640 Rpap1Q80TE0 1409 aa17.4■□□□□ 0.38
Sqle-202ENSMUST00000100640 Fam135aQ6NS59 1506 aa17.39■□□□□ 0.37
Sqle-202ENSMUST00000100640 Eea1Q8BL66 1411 aa17.37■□□□□ 0.37
Sqle-202ENSMUST00000100640 Arap1Q4LDD4 1452 aa17.36■□□□□ 0.37
Sqle-202ENSMUST00000100640 Unc13aQ4KUS2 1712 aa17.35■□□□□ 0.37
Sqle-202ENSMUST00000100640 NclP09405 707 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 78 ms