RNA–Protein interactions for RNA: ENSMUST00000099131.10

Smarcc2-202, Transcript of SWI/SNF complex subunit SMARCC2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc2, Length 4,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2-202ENSMUST00000099131 NischQ80TM9 1593 aa18.11■□□□□ 0.49
Smarcc2-202ENSMUST00000099131 Gm35339A0A140LHH9 1649 aa18.08■□□□□ 0.49
Smarcc2-202ENSMUST00000099131 Abcc9P70170 1546 aa17.54■□□□□ 0.4
Smarcc2-202ENSMUST00000099131 Rhox8Q6VSS7 320 aa17.43■□□□□ 0.38
Smarcc2-202ENSMUST00000099131 Abcc8B2RUS7 1588 aa17.36■□□□□ 0.37
Smarcc2-202ENSMUST00000099131 ScribQ80U72 1612 aa16.44■□□□□ 0.22
Smarcc2-202ENSMUST00000099131 Rtl1Q7M732 1744 aa16.29■□□□□ 0.2
Smarcc2-202ENSMUST00000099131 Dcaf1Q80TR8 1506 aa16.11■□□□□ 0.17
Smarcc2-202ENSMUST00000099131 NacadQ5SWP3 1504 aa16.07■□□□□ 0.16
Smarcc2-202ENSMUST00000099131 Kdm5dQ62240 1548 aa16.06■□□□□ 0.16
Smarcc2-202ENSMUST00000099131 Rpgrip1Q9EPQ2 1331 aa16.04■□□□□ 0.16
Smarcc2-202ENSMUST00000099131 Ccdc180J3QNE4 1664 aa16.02■□□□□ 0.16
Smarcc2-202ENSMUST00000099131 Ehmt2Q9Z148 1263 aaKnown RBP15.98■□□□□ 0.15
Smarcc2-202ENSMUST00000099131 Ccdc136Q3TVA9 1136 aa15.85■□□□□ 0.13
Smarcc2-202ENSMUST00000099131 Rb1cc1Q9ESK9 1588 aa15.82■□□□□ 0.12
Smarcc2-202ENSMUST00000099131 Trim41Q5NCC3 630 aa15.82■□□□□ 0.12
Smarcc2-202ENSMUST00000099131 Sycp2Q9CUU3 1500 aa15.72■□□□□ 0.11
Smarcc2-202ENSMUST00000099131 Baz1aO88379 1555 aa15.63■□□□□ 0.09
Smarcc2-202ENSMUST00000099131 Zcchc6Q5BLK4 1491 aaKnown RBP15.61■□□□□ 0.09
Smarcc2-202ENSMUST00000099131 Cngb1E1AZ71 1325 aa15.54■□□□□ 0.08
Smarcc2-202ENSMUST00000099131 Las1lA2BE28 776 aaKnown RBP15.53■□□□□ 0.08
Smarcc2-202ENSMUST00000099131 HrcG5E8J6 738 aa15.51■□□□□ 0.07
Smarcc2-202ENSMUST00000099131 Esf1Q3V1V3 845 aaKnown RBP15.5■□□□□ 0.07
Smarcc2-202ENSMUST00000099131 Crybg2B7ZCC2 1516 aa15.48■□□□□ 0.07
Smarcc2-202ENSMUST00000099131 Wdr66E9Q743 1299 aa15.46■□□□□ 0.07
Smarcc2-202ENSMUST00000099131 BicraF8VPZ9 1578 aa15.38■□□□□ 0.05
Smarcc2-202ENSMUST00000099131 Zeb1Q64318 1117 aa15.33■□□□□ 0.05
Smarcc2-202ENSMUST00000099131 Ube2uB1AUC4 352 aa15.21■□□□□ 0.02
Smarcc2-202ENSMUST00000099131 Gab3Q8BSM5 595 aa15.19■□□□□ 0.02
Smarcc2-202ENSMUST00000099131 Brd4Q9ESU6 1400 aaKnown RBP15.19■□□□□ 0.02
Smarcc2-202ENSMUST00000099131 Smarca2Q6DIC0 1577 aa15.19■□□□□ 0.02
Smarcc2-202ENSMUST00000099131 Pelp1Q9DBD5 1123 aaKnown RBP15.17■□□□□ 0.02
Smarcc2-202ENSMUST00000099131 Acin1Q9JIX8 1338 aaKnown RBP15.14■□□□□ 0.01
Smarcc2-202ENSMUST00000099131 Cecr2E9Q2Z1 1453 aa14.98□□□□□ -0.01
Smarcc2-202ENSMUST00000099131 Pds5bQ4VA53 1446 aaKnown RBP14.96□□□□□ -0.01
Smarcc2-202ENSMUST00000099131 Npm2Q80W85 207 aa14.94□□□□□ -0.02
Smarcc2-202ENSMUST00000099131 Myt1lP97500 1187 aa14.92□□□□□ -0.02
Smarcc2-202ENSMUST00000099131 Smarca4Q3TKT4 1613 aaKnown RBP14.91□□□□□ -0.02
Smarcc2-202ENSMUST00000099131 Cep164Q5DU05 1446 aa14.88□□□□□ -0.03
Smarcc2-202ENSMUST00000099131 Atad2bE9Q166 1460 aaKnown RBP14.88□□□□□ -0.03
Smarcc2-202ENSMUST00000099131 Pcgf6Q99NA9 353 aa14.86□□□□□ -0.03
Smarcc2-202ENSMUST00000099131 Amer1Q7TS75 1132 aa14.85□□□□□ -0.03
Smarcc2-202ENSMUST00000099131 CenpbP27790 599 aa14.83□□□□□ -0.03
Smarcc2-202ENSMUST00000099131 Iqgap2Q3UQ44 1575 aa14.77□□□□□ -0.05
Smarcc2-202ENSMUST00000099131 Golga3P55937 1487 aa14.77□□□□□ -0.05
Smarcc2-202ENSMUST00000099131 Synj1Q8CHC4 1574 aa14.74□□□□□ -0.05
Smarcc2-202ENSMUST00000099131 CftrP26361 1476 aa14.73□□□□□ -0.05
Smarcc2-202ENSMUST00000099131 Cttnbp2B9EJA2 1648 aa14.7□□□□□ -0.06
Smarcc2-202ENSMUST00000099131 Ercc6F8VPZ5 1481 aa14.69□□□□□ -0.06
Smarcc2-202ENSMUST00000099131 UbtfP25976 765 aaKnown RBP14.68□□□□□ -0.06
Smarcc2-202ENSMUST00000099131 Slc24a1Q91WD8 1130 aa14.67□□□□□ -0.06
Smarcc2-202ENSMUST00000099131 NefmP08553 848 aa14.66□□□□□ -0.06
Smarcc2-202ENSMUST00000099131 Il27Q8K3I6 234 aa14.61□□□□□ -0.07
Smarcc2-202ENSMUST00000099131 Thoc2B1AZI6 1594 aaKnown RBP14.6□□□□□ -0.07
Smarcc2-202ENSMUST00000099131 Chic1Q8CBW7 227 aa14.59□□□□□ -0.07
Smarcc2-202ENSMUST00000099131 Wdr62Q3U3T8 1523 aa14.56□□□□□ -0.08
Smarcc2-202ENSMUST00000099131 Supt5hO55201 1082 aaKnown RBP14.56□□□□□ -0.08
Smarcc2-202ENSMUST00000099131 Frmpd1A2AKB4 1549 aa14.55□□□□□ -0.08
Smarcc2-202ENSMUST00000099131 Stra8P70278 393 aa14.54□□□□□ -0.08
Smarcc2-202ENSMUST00000099131 Npm1Q61937 292 aaKnown RBP14.48□□□□□ -0.09
Smarcc2-202ENSMUST00000099131 Rsf1E9PWW9 1441 aaKnown RBP14.46□□□□□ -0.09
Smarcc2-202ENSMUST00000099131 Ttbk1Q6PCN3 1308 aa14.45□□□□□ -0.1
Smarcc2-202ENSMUST00000099131 Cdk11bP24788 784 aaKnown RBP14.44□□□□□ -0.1
Smarcc2-202ENSMUST00000099131 Fmn1Q05860 1466 aa14.43□□□□□ -0.1
Smarcc2-202ENSMUST00000099131 Cc2d2aQ8CFW7 1633 aa14.42□□□□□ -0.1
Smarcc2-202ENSMUST00000099131 Phldb1Q6PDH0 1371 aaKnown RBP14.42□□□□□ -0.1
Smarcc2-202ENSMUST00000099131 Ppargc1bQ8VHJ7 1014 aa14.42□□□□□ -0.1
Smarcc2-202ENSMUST00000099131 Dnajc5bQ9CQ94 199 aa14.39□□□□□ -0.11
Smarcc2-202ENSMUST00000099131 Fam135aQ6NS59 1506 aa14.38□□□□□ -0.11
Smarcc2-202ENSMUST00000099131 Ubl4bQ9CQ84 188 aa14.34□□□□□ -0.11
Smarcc2-202ENSMUST00000099131 Ccdc88bQ4QRL3 1481 aa14.33□□□□□ -0.11
Smarcc2-202ENSMUST00000099131 Kif15Q6P9L6 1387 aa14.33□□□□□ -0.12
Smarcc2-202ENSMUST00000099131 Top2bQ64511 1612 aa14.33□□□□□ -0.12
Smarcc2-202ENSMUST00000099131 Nop58Q6DFW4 536 aaKnown RBP14.32□□□□□ -0.12
Smarcc2-202ENSMUST00000099131 Ccdc18Q640L5 1455 aa14.3□□□□□ -0.12
Smarcc2-202ENSMUST00000099131 Unc13aQ4KUS2 1712 aa14.29□□□□□ -0.12
Smarcc2-202ENSMUST00000099131 4933416C03RikQ3V063 378 aa14.26□□□□□ -0.13
Smarcc2-202ENSMUST00000099131 Baz1bQ9Z277 1479 aa14.24□□□□□ -0.13
Smarcc2-202ENSMUST00000099131 Clip1Q922J3 1391 aa14.24□□□□□ -0.13
Smarcc2-202ENSMUST00000099131 NrdcQ8BHG1 1161 aa14.22□□□□□ -0.13
Smarcc2-202ENSMUST00000099131 Neurod1Q60867 357 aa14.21□□□□□ -0.13
Smarcc2-202ENSMUST00000099131 4930567H17RikQ3V0K5 233 aa14.21□□□□□ -0.13
Smarcc2-202ENSMUST00000099131 Lamc3Q9R0B6 1581 aa14.2□□□□□ -0.14
Smarcc2-202ENSMUST00000099131 Fam50aQ9WV03 339 aaKnown RBP14.19□□□□□ -0.14
Smarcc2-202ENSMUST00000099131 Mier1Q5UAK0 511 aa14.19□□□□□ -0.14
Smarcc2-202ENSMUST00000099131 Eif5bQ05D44 1216 aaKnown RBP14.18□□□□□ -0.14
Smarcc2-202ENSMUST00000099131 Ap3b1Q9Z1T1 1105 aa14.18□□□□□ -0.14
Smarcc2-202ENSMUST00000099131 NclP09405 707 aaKnown RBP14.17□□□□□ -0.14
Smarcc2-202ENSMUST00000099131 Tnnt3Q9QZ47 272 aa14.15□□□□□ -0.14
Smarcc2-202ENSMUST00000099131 Myt1Q8CFC2 1127 aa14.15□□□□□ -0.14
Smarcc2-202ENSMUST00000099131 TnnQ80Z71 1560 aa14.14□□□□□ -0.15
Smarcc2-202ENSMUST00000099131 Cux2P70298 1426 aa14.12□□□□□ -0.15
Smarcc2-202ENSMUST00000099131 Anp32bQ9EST5 272 aaKnown RBP14.12□□□□□ -0.15
Smarcc2-202ENSMUST00000099131 Cep162Q6ZQ06 1403 aa14.11□□□□□ -0.15
Smarcc2-202ENSMUST00000099131 NeflP08551 543 aa14.09□□□□□ -0.15
Smarcc2-202ENSMUST00000099131 Mrc2Q64449 1479 aa14.09□□□□□ -0.15
Smarcc2-202ENSMUST00000099131 Plekhg3Q4VAC9 1341 aa14.08□□□□□ -0.16
Smarcc2-202ENSMUST00000099131 Rapgef2Q8CHG7 1496 aa14.05□□□□□ -0.16
Smarcc2-202ENSMUST00000099131 Eea1Q8BL66 1411 aa14.05□□□□□ -0.16
Smarcc2-202ENSMUST00000099131 Setd5Q5XJV7 1441 aa14.04□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 114.1 ms