RNA–Protein interactions for RNA: ENSMUST00000098613.8

Usp3-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

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Gene Usp3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3-202ENSMUST00000098613 NischQ80TM9 1593 aa15.78■□□□□ 0.12
Usp3-202ENSMUST00000098613 Gm35339A0A140LHH9 1649 aa15.52■□□□□ 0.07
Usp3-202ENSMUST00000098613 Abcc9P70170 1546 aa15.38■□□□□ 0.05
Usp3-202ENSMUST00000098613 Rhox8Q6VSS7 320 aa15.22■□□□□ 0.03
Usp3-202ENSMUST00000098613 Abcc8B2RUS7 1588 aa14.95□□□□□ -0.02
Usp3-202ENSMUST00000098613 Rtl1Q7M732 1744 aa14.84□□□□□ -0.03
Usp3-202ENSMUST00000098613 Ccdc180J3QNE4 1664 aa14.7□□□□□ -0.06
Usp3-202ENSMUST00000098613 Rpgrip1Q9EPQ2 1331 aa14.56□□□□□ -0.08
Usp3-202ENSMUST00000098613 Ehmt2Q9Z148 1263 aaKnown RBP14.56□□□□□ -0.08
Usp3-202ENSMUST00000098613 Acin1Q9JIX8 1338 aaKnown RBP14.39□□□□□ -0.11
Usp3-202ENSMUST00000098613 Zcchc6Q5BLK4 1491 aaKnown RBP14.37□□□□□ -0.11
Usp3-202ENSMUST00000098613 Ccdc136Q3TVA9 1136 aa14.13□□□□□ -0.15
Usp3-202ENSMUST00000098613 Pcgf6Q99NA9 353 aa14.12□□□□□ -0.15
Usp3-202ENSMUST00000098613 HrcG5E8J6 738 aa14□□□□□ -0.17
Usp3-202ENSMUST00000098613 Dcaf1Q80TR8 1506 aa13.99□□□□□ -0.17
Usp3-202ENSMUST00000098613 ScribQ80U72 1612 aa13.88□□□□□ -0.19
Usp3-202ENSMUST00000098613 Rb1cc1Q9ESK9 1588 aa13.86□□□□□ -0.19
Usp3-202ENSMUST00000098613 Supt5hO55201 1082 aaKnown RBP13.85□□□□□ -0.19
Usp3-202ENSMUST00000098613 Trim41Q5NCC3 630 aa13.85□□□□□ -0.19
Usp3-202ENSMUST00000098613 Baz1aO88379 1555 aa13.7□□□□□ -0.22
Usp3-202ENSMUST00000098613 Kdm5dQ62240 1548 aa13.64□□□□□ -0.23
Usp3-202ENSMUST00000098613 Neurod1Q60867 357 aa13.63□□□□□ -0.23
Usp3-202ENSMUST00000098613 Zeb1Q64318 1117 aa13.61□□□□□ -0.23
Usp3-202ENSMUST00000098613 Gab3Q8BSM5 595 aa13.54□□□□□ -0.24
Usp3-202ENSMUST00000098613 Cep164Q5DU05 1446 aa13.53□□□□□ -0.24
Usp3-202ENSMUST00000098613 NacadQ5SWP3 1504 aa13.47□□□□□ -0.25
Usp3-202ENSMUST00000098613 Chic1Q8CBW7 227 aa13.45□□□□□ -0.26
Usp3-202ENSMUST00000098613 Cngb1E1AZ71 1325 aa13.44□□□□□ -0.26
Usp3-202ENSMUST00000098613 Smarca2Q6DIC0 1577 aa13.43□□□□□ -0.26
Usp3-202ENSMUST00000098613 Mier1Q5UAK0 511 aa13.38□□□□□ -0.27
Usp3-202ENSMUST00000098613 Sall2Q9QX96 1004 aa13.38□□□□□ -0.27
Usp3-202ENSMUST00000098613 Crybg2B7ZCC2 1516 aa13.38□□□□□ -0.27
Usp3-202ENSMUST00000098613 Rsf1E9PWW9 1441 aaKnown RBP13.36□□□□□ -0.27
Usp3-202ENSMUST00000098613 NefmP08553 848 aa13.27□□□□□ -0.29
Usp3-202ENSMUST00000098613 Ccdc88bQ4QRL3 1481 aa13.24□□□□□ -0.29
Usp3-202ENSMUST00000098613 Csrnp3P59055 597 aa13.22□□□□□ -0.29
Usp3-202ENSMUST00000098613 Ppargc1bQ8VHJ7 1014 aa13.21□□□□□ -0.29
Usp3-202ENSMUST00000098613 1700123L14RikQ3V2K7 440 aa13.2□□□□□ -0.3
Usp3-202ENSMUST00000098613 Sycp2Q9CUU3 1500 aa13.18□□□□□ -0.3
Usp3-202ENSMUST00000098613 Las1lA2BE28 776 aaKnown RBP13.17□□□□□ -0.3
Usp3-202ENSMUST00000098613 Wdr66E9Q743 1299 aa13.17□□□□□ -0.3
Usp3-202ENSMUST00000098613 Aebp2Q9Z248 504 aaKnown RBP13.15□□□□□ -0.3
Usp3-202ENSMUST00000098613 UbtfP25976 765 aaKnown RBP13.14□□□□□ -0.31
Usp3-202ENSMUST00000098613 Anks4bQ8K3X6 423 aa13.1□□□□□ -0.31
Usp3-202ENSMUST00000098613 Cecr2E9Q2Z1 1453 aa13.07□□□□□ -0.32
Usp3-202ENSMUST00000098613 Brd4Q9ESU6 1400 aaKnown RBP13.04□□□□□ -0.32
Usp3-202ENSMUST00000098613 Golga3P55937 1487 aa13.04□□□□□ -0.32
Usp3-202ENSMUST00000098613 Gm38655A0A286YDK6 273 aa13.03□□□□□ -0.32
Usp3-202ENSMUST00000098613 Esf1Q3V1V3 845 aaKnown RBP13.03□□□□□ -0.32
Usp3-202ENSMUST00000098613 Nop58Q6DFW4 536 aaKnown RBP12.98□□□□□ -0.33
Usp3-202ENSMUST00000098613 Synj1Q8CHC4 1574 aa12.97□□□□□ -0.33
Usp3-202ENSMUST00000098613 Cdk11bP24788 784 aaKnown RBP12.97□□□□□ -0.33
Usp3-202ENSMUST00000098613 Myt1lP97500 1187 aa12.93□□□□□ -0.34
Usp3-202ENSMUST00000098613 ClspnQ80YR7 1315 aa12.91□□□□□ -0.34
Usp3-202ENSMUST00000098613 BicraF8VPZ9 1578 aa12.89□□□□□ -0.35
Usp3-202ENSMUST00000098613 Top2bQ64511 1612 aa12.88□□□□□ -0.35
Usp3-202ENSMUST00000098613 CftrP26361 1476 aa12.84□□□□□ -0.35
Usp3-202ENSMUST00000098613 TonslQ6NZL6 1363 aa12.82□□□□□ -0.36
Usp3-202ENSMUST00000098613 Aplp2Q06335 707 aa12.81□□□□□ -0.36
Usp3-202ENSMUST00000098613 Cttnbp2B9EJA2 1648 aa12.81□□□□□ -0.36
Usp3-202ENSMUST00000098613 Cc2d2aQ8CFW7 1633 aa12.81□□□□□ -0.36
Usp3-202ENSMUST00000098613 Plekhg3Q4VAC9 1341 aa12.81□□□□□ -0.36
Usp3-202ENSMUST00000098613 CenpbP27790 599 aa12.76□□□□□ -0.37
Usp3-202ENSMUST00000098613 Rapgef2Q8CHG7 1496 aa12.76□□□□□ -0.37
Usp3-202ENSMUST00000098613 Npm2Q80W85 207 aa12.72□□□□□ -0.37
Usp3-202ENSMUST00000098613 Eid3Q3V124 375 aa12.71□□□□□ -0.38
Usp3-202ENSMUST00000098613 Cep162Q6ZQ06 1403 aa12.71□□□□□ -0.38
Usp3-202ENSMUST00000098613 SafbD3YXK2 937 aaKnown RBP12.68□□□□□ -0.38
Usp3-202ENSMUST00000098613 Smarca4Q3TKT4 1613 aaKnown RBP12.67□□□□□ -0.38
Usp3-202ENSMUST00000098613 Mapk8ip2Q9ERE9 830 aa12.67□□□□□ -0.38
Usp3-202ENSMUST00000098613 Ap3b1Q9Z1T1 1105 aa12.66□□□□□ -0.38
Usp3-202ENSMUST00000098613 Clip1Q922J3 1391 aa12.65□□□□□ -0.38
Usp3-202ENSMUST00000098613 Hnrnpul2Q00PI9 745 aaKnown RBP12.65□□□□□ -0.38
Usp3-202ENSMUST00000098613 Top2aQ01320 1528 aaKnown RBP12.63□□□□□ -0.39
Usp3-202ENSMUST00000098613 Fmn1Q05860 1466 aa12.62□□□□□ -0.39
Usp3-202ENSMUST00000098613 Ncapd3Q6ZQK0 1506 aa12.58□□□□□ -0.4
Usp3-202ENSMUST00000098613 Fam71e1A1L3C1 212 aa12.57□□□□□ -0.4
Usp3-202ENSMUST00000098613 Myt1Q8CFC2 1127 aa12.52□□□□□ -0.4
Usp3-202ENSMUST00000098613 Eif4g1Q6NZJ6 1600 aaKnown RBP12.5□□□□□ -0.41
Usp3-202ENSMUST00000098613 Iqgap2Q3UQ44 1575 aa12.48□□□□□ -0.41
Usp3-202ENSMUST00000098613 Arap1Q4LDD4 1452 aa12.43□□□□□ -0.42
Usp3-202ENSMUST00000098613 Il27Q8K3I6 234 aa12.42□□□□□ -0.42
Usp3-202ENSMUST00000098613 TnnQ80Z71 1560 aa12.41□□□□□ -0.42
Usp3-202ENSMUST00000098613 Tnnt3Q9QZ47 272 aa12.4□□□□□ -0.43
Usp3-202ENSMUST00000098613 Kdm5bQ80Y84 1544 aa12.4□□□□□ -0.43
Usp3-202ENSMUST00000098613 PtprkP35822 1457 aa12.39□□□□□ -0.43
Usp3-202ENSMUST00000098613 Arhgap35Q91YM2 1499 aa12.39□□□□□ -0.43
Usp3-202ENSMUST00000098613 Fam50aQ9WV03 339 aaKnown RBP12.38□□□□□ -0.43
Usp3-202ENSMUST00000098613 Rpap1Q80TE0 1409 aa12.37□□□□□ -0.43
Usp3-202ENSMUST00000098613 NclP09405 707 aaKnown RBP12.37□□□□□ -0.43
Usp3-202ENSMUST00000098613 Eea1Q8BL66 1411 aa12.37□□□□□ -0.43
Usp3-202ENSMUST00000098613 Znf710Q3U288 666 aa12.36□□□□□ -0.43
Usp3-202ENSMUST00000098613 Setd5Q5XJV7 1441 aa12.36□□□□□ -0.43
Usp3-202ENSMUST00000098613 DiexfQ8BTT6 772 aaKnown RBP12.32□□□□□ -0.44
Usp3-202ENSMUST00000098613 Slc24a1Q91WD8 1130 aa12.32□□□□□ -0.44
Usp3-202ENSMUST00000098613 Atad2bE9Q166 1460 aaKnown RBP12.32□□□□□ -0.44
Usp3-202ENSMUST00000098613 Bcl11aQ9QYE3 773 aa12.32□□□□□ -0.44
Usp3-202ENSMUST00000098613 Lmod2Q3UHZ5 550 aa12.31□□□□□ -0.44
Usp3-202ENSMUST00000098613 Arhgef5E9Q7D5 1581 aa12.31□□□□□ -0.44
Usp3-202ENSMUST00000098613 Baz1bQ9Z277 1479 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 130.3 ms