RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Rhox8Q6VSS7 320 aa17.97■□□□□ 0.47
Smarca1-202ENSMUST00000088973 Ehmt2Q9Z148 1263 aaKnown RBP16.18■□□□□ 0.18
Smarca1-202ENSMUST00000088973 Rpgrip1Q9EPQ2 1331 aa16.15■□□□□ 0.18
Smarca1-202ENSMUST00000088973 Ccdc136Q3TVA9 1136 aa15.98■□□□□ 0.15
Smarca1-202ENSMUST00000088973 Esf1Q3V1V3 845 aaKnown RBP15.76■□□□□ 0.11
Smarca1-202ENSMUST00000088973 Cngb1E1AZ71 1325 aa15.74■□□□□ 0.11
Smarca1-202ENSMUST00000088973 Gab3Q8BSM5 595 aa15.65■□□□□ 0.1
Smarca1-202ENSMUST00000088973 Wdr66E9Q743 1299 aa15.61■□□□□ 0.09
Smarca1-202ENSMUST00000088973 Las1lA2BE28 776 aaKnown RBP15.54■□□□□ 0.08
Smarca1-202ENSMUST00000088973 Trim41Q5NCC3 630 aa15.53■□□□□ 0.08
Smarca1-202ENSMUST00000088973 Zeb1Q64318 1117 aa15.51■□□□□ 0.07
Smarca1-202ENSMUST00000088973 Ube2uB1AUC4 352 aa15.48■□□□□ 0.07
Smarca1-202ENSMUST00000088973 NischQ80TM9 1593 aa15.43■□□□□ 0.06
Smarca1-202ENSMUST00000088973 Npm2Q80W85 207 aa15.41■□□□□ 0.06
Smarca1-202ENSMUST00000088973 Myt1lP97500 1187 aa15.36■□□□□ 0.05
Smarca1-202ENSMUST00000088973 Acin1Q9JIX8 1338 aaKnown RBP15.08■□□□□ 0
Smarca1-202ENSMUST00000088973 Pelp1Q9DBD5 1123 aaKnown RBP15.07■□□□□ 0
Smarca1-202ENSMUST00000088973 UbtfP25976 765 aaKnown RBP15.06■□□□□ 0
Smarca1-202ENSMUST00000088973 NefmP08553 848 aa14.98□□□□□ -0.01
Smarca1-202ENSMUST00000088973 HrcG5E8J6 738 aa14.84□□□□□ -0.03
Smarca1-202ENSMUST00000088973 Il27Q8K3I6 234 aa14.84□□□□□ -0.03
Smarca1-202ENSMUST00000088973 Slc24a1Q91WD8 1130 aa14.8□□□□□ -0.04
Smarca1-202ENSMUST00000088973 CenpbP27790 599 aa14.79□□□□□ -0.04
Smarca1-202ENSMUST00000088973 Stra8P70278 393 aa14.71□□□□□ -0.05
Smarca1-202ENSMUST00000088973 Pcgf6Q99NA9 353 aa14.62□□□□□ -0.07
Smarca1-202ENSMUST00000088973 Ccdc180J3QNE4 1664 aa14.61□□□□□ -0.07
Smarca1-202ENSMUST00000088973 Cdk11bP24788 784 aaKnown RBP14.61□□□□□ -0.07
Smarca1-202ENSMUST00000088973 Fam50aQ9WV03 339 aaKnown RBP14.59□□□□□ -0.07
Smarca1-202ENSMUST00000088973 Ap3b1Q9Z1T1 1105 aa14.58□□□□□ -0.08
Smarca1-202ENSMUST00000088973 Zcchc6Q5BLK4 1491 aaKnown RBP14.58□□□□□ -0.08
Smarca1-202ENSMUST00000088973 Amer1Q7TS75 1132 aa14.54□□□□□ -0.08
Smarca1-202ENSMUST00000088973 Ppargc1bQ8VHJ7 1014 aa14.54□□□□□ -0.08
Smarca1-202ENSMUST00000088973 Neurod1Q60867 357 aa14.52□□□□□ -0.09
Smarca1-202ENSMUST00000088973 Abcc9P70170 1546 aa14.51□□□□□ -0.09
Smarca1-202ENSMUST00000088973 NclP09405 707 aaKnown RBP14.48□□□□□ -0.09
Smarca1-202ENSMUST00000088973 Nop58Q6DFW4 536 aaKnown RBP14.47□□□□□ -0.09
Smarca1-202ENSMUST00000088973 NrdcQ8BHG1 1161 aa14.42□□□□□ -0.1
Smarca1-202ENSMUST00000088973 Supt5hO55201 1082 aaKnown RBP14.39□□□□□ -0.11
Smarca1-202ENSMUST00000088973 Anp32bQ9EST5 272 aaKnown RBP14.37□□□□□ -0.11
Smarca1-202ENSMUST00000088973 Gm35339A0A140LHH9 1649 aa14.36□□□□□ -0.11
Smarca1-202ENSMUST00000088973 TonslQ6NZL6 1363 aa14.32□□□□□ -0.12
Smarca1-202ENSMUST00000088973 Eif5bQ05D44 1216 aaKnown RBP14.32□□□□□ -0.12
Smarca1-202ENSMUST00000088973 Mier1Q5UAK0 511 aa14.3□□□□□ -0.12
Smarca1-202ENSMUST00000088973 Tnnt3Q9QZ47 272 aa14.3□□□□□ -0.12
Smarca1-202ENSMUST00000088973 Os9Q8K2C7 672 aa14.29□□□□□ -0.12
Smarca1-202ENSMUST00000088973 Ttbk1Q6PCN3 1308 aa14.28□□□□□ -0.12
Smarca1-202ENSMUST00000088973 Rtl1Q7M732 1744 aa14.28□□□□□ -0.12
Smarca1-202ENSMUST00000088973 NeflP08551 543 aa14.22□□□□□ -0.13
Smarca1-202ENSMUST00000088973 Lmod2Q3UHZ5 550 aa14.22□□□□□ -0.13
Smarca1-202ENSMUST00000088973 Plekhg3Q4VAC9 1341 aa14.2□□□□□ -0.14
Smarca1-202ENSMUST00000088973 Npm1Q61937 292 aaKnown RBP14.16□□□□□ -0.14
Smarca1-202ENSMUST00000088973 4933416C03RikQ3V063 378 aa14.15□□□□□ -0.14
Smarca1-202ENSMUST00000088973 Zbtb7cQ8VCZ7 619 aa14.14□□□□□ -0.15
Smarca1-202ENSMUST00000088973 Myt1Q8CFC2 1127 aa14.04□□□□□ -0.16
Smarca1-202ENSMUST00000088973 Hnrnpul2Q00PI9 745 aaKnown RBP14.04□□□□□ -0.16
Smarca1-202ENSMUST00000088973 Eid3Q3V124 375 aa14.03□□□□□ -0.16
Smarca1-202ENSMUST00000088973 ClspnQ80YR7 1315 aa14.02□□□□□ -0.16
Smarca1-202ENSMUST00000088973 Abcc8B2RUS7 1588 aa13.99□□□□□ -0.17
Smarca1-202ENSMUST00000088973 Mapk8ip2Q9ERE9 830 aa13.99□□□□□ -0.17
Smarca1-202ENSMUST00000088973 Zbtb4Q5F293 982 aa13.97□□□□□ -0.17
Smarca1-202ENSMUST00000088973 Chic1Q8CBW7 227 aa13.95□□□□□ -0.18
Smarca1-202ENSMUST00000088973 Ifnlr1Q8CGK5 535 aa13.93□□□□□ -0.18
Smarca1-202ENSMUST00000088973 4930567H17RikQ3V0K5 233 aa13.9□□□□□ -0.18
Smarca1-202ENSMUST00000088973 Sall2Q9QX96 1004 aa13.89□□□□□ -0.19
Smarca1-202ENSMUST00000088973 Clip1Q922J3 1391 aa13.88□□□□□ -0.19
Smarca1-202ENSMUST00000088973 Erich6D3Z6S9 713 aa13.85□□□□□ -0.19
Smarca1-202ENSMUST00000088973 Fkbp15Q6P9Q6 1216 aaKnown RBP13.84□□□□□ -0.19
Smarca1-202ENSMUST00000088973 Gm13697A2AK42 830 aa13.84□□□□□ -0.19
Smarca1-202ENSMUST00000088973 Brd4Q9ESU6 1400 aaKnown RBP13.84□□□□□ -0.19
Smarca1-202ENSMUST00000088973 Prdm10Q3UTQ7 1184 aa13.83□□□□□ -0.2
Smarca1-202ENSMUST00000088973 Rtl5Q5DTT4 599 aa13.81□□□□□ -0.2
Smarca1-202ENSMUST00000088973 Cep164Q5DU05 1446 aa13.79□□□□□ -0.2
Smarca1-202ENSMUST00000088973 Anp32aO35381 247 aa13.79□□□□□ -0.2
Smarca1-202ENSMUST00000088973 Gm38655A0A286YDK6 273 aa13.78□□□□□ -0.2
Smarca1-202ENSMUST00000088973 Atp1b4Q99ME6 356 aa13.77□□□□□ -0.21
Smarca1-202ENSMUST00000088973 Nlrp6Q91WS2 869 aa13.75□□□□□ -0.21
Smarca1-202ENSMUST00000088973 DaxxO35613 739 aa13.72□□□□□ -0.21
Smarca1-202ENSMUST00000088973 Dcaf1Q80TR8 1506 aa13.71□□□□□ -0.21
Smarca1-202ENSMUST00000088973 Polr3glQ8R0C0 218 aa13.71□□□□□ -0.21
Smarca1-202ENSMUST00000088973 Ccer2J3QPU5 274 aa13.7□□□□□ -0.22
Smarca1-202ENSMUST00000088973 Anks4bQ8K3X6 423 aa13.68□□□□□ -0.22
Smarca1-202ENSMUST00000088973 Csrnp3P59055 597 aa13.68□□□□□ -0.22
Smarca1-202ENSMUST00000088973 Ubl4bQ9CQ84 188 aa13.68□□□□□ -0.22
Smarca1-202ENSMUST00000088973 Chic2Q9D9G3 165 aa13.68□□□□□ -0.22
Smarca1-202ENSMUST00000088973 Gm13695A2AK44 830 aa13.63□□□□□ -0.23
Smarca1-202ENSMUST00000088973 ArxO35085 564 aa13.61□□□□□ -0.23
Smarca1-202ENSMUST00000088973 Hdac5Q9Z2V6 1113 aa13.59□□□□□ -0.23
Smarca1-202ENSMUST00000088973 BlmO88700 1416 aa13.59□□□□□ -0.23
Smarca1-202ENSMUST00000088973 Mrs2Q5NCE8 434 aa13.59□□□□□ -0.23
Smarca1-202ENSMUST00000088973 Calr4Q3TQS0 420 aa13.56□□□□□ -0.24
Smarca1-202ENSMUST00000088973 Rb1cc1Q9ESK9 1588 aa13.56□□□□□ -0.24
Smarca1-202ENSMUST00000088973 Plppr3Q7TPB0 716 aa13.56□□□□□ -0.24
Smarca1-202ENSMUST00000088973 Ppp4r2Q0VGB7 417 aa13.54□□□□□ -0.24
Smarca1-202ENSMUST00000088973 Rad21Q61550 635 aaKnown RBP13.54□□□□□ -0.24
Smarca1-202ENSMUST00000088973 Rangap1P46061 589 aaKnown RBP13.53□□□□□ -0.24
Smarca1-202ENSMUST00000088973 Aplp2Q06335 707 aa13.52□□□□□ -0.25
Smarca1-202ENSMUST00000088973 Setd5Q5XJV7 1441 aa13.5□□□□□ -0.25
Smarca1-202ENSMUST00000088973 Clstn2Q9ER65 966 aa13.45□□□□□ -0.26
Smarca1-202ENSMUST00000088973 Aebp2Q9Z248 504 aaKnown RBP13.45□□□□□ -0.26
Smarca1-202ENSMUST00000088973 Upf2A2AT37 1269 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 219.4 ms