RNA–Protein interactions for RNA: ENSMUST00000087556.6

Smc5-201, Transcript of Structural maintenance of chromosomes protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smc5, Length 5,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5-201ENSMUST00000087556 Rhox8Q6VSS7 320 aa13.18□□□□□ -0.3
Smc5-201ENSMUST00000087556 Abcc9P70170 1546 aa12.88□□□□□ -0.35
Smc5-201ENSMUST00000087556 Gm35339A0A140LHH9 1649 aa12.54□□□□□ -0.4
Smc5-201ENSMUST00000087556 NischQ80TM9 1593 aa12.47□□□□□ -0.41
Smc5-201ENSMUST00000087556 Esf1Q3V1V3 845 aaKnown RBP12.35□□□□□ -0.43
Smc5-201ENSMUST00000087556 Trim41Q5NCC3 630 aa12.22□□□□□ -0.45
Smc5-201ENSMUST00000087556 Ttbk1Q6PCN3 1308 aa12.1□□□□□ -0.47
Smc5-201ENSMUST00000087556 Zeb1Q64318 1117 aa12.02□□□□□ -0.48
Smc5-201ENSMUST00000087556 Pelp1Q9DBD5 1123 aaKnown RBP11.92□□□□□ -0.5
Smc5-201ENSMUST00000087556 Il27Q8K3I6 234 aa11.86□□□□□ -0.51
Smc5-201ENSMUST00000087556 Cngb1E1AZ71 1325 aa11.84□□□□□ -0.51
Smc5-201ENSMUST00000087556 Ccdc136Q3TVA9 1136 aa11.8□□□□□ -0.52
Smc5-201ENSMUST00000087556 Plppr3Q7TPB0 716 aa11.78□□□□□ -0.52
Smc5-201ENSMUST00000087556 Ubl4bQ9CQ84 188 aa11.76□□□□□ -0.53
Smc5-201ENSMUST00000087556 Npm1Q61937 292 aaKnown RBP11.71□□□□□ -0.54
Smc5-201ENSMUST00000087556 Zcchc6Q5BLK4 1491 aaKnown RBP11.65□□□□□ -0.54
Smc5-201ENSMUST00000087556 Ifnlr1Q8CGK5 535 aa11.63□□□□□ -0.55
Smc5-201ENSMUST00000087556 Npm2Q80W85 207 aa11.62□□□□□ -0.55
Smc5-201ENSMUST00000087556 Abcc8B2RUS7 1588 aa11.6□□□□□ -0.55
Smc5-201ENSMUST00000087556 Ercc6F8VPZ5 1481 aa11.55□□□□□ -0.56
Smc5-201ENSMUST00000087556 NacadQ5SWP3 1504 aa11.46□□□□□ -0.57
Smc5-201ENSMUST00000087556 Pds5bQ4VA53 1446 aaKnown RBP11.35□□□□□ -0.59
Smc5-201ENSMUST00000087556 Gm13697A2AK42 830 aa11.3□□□□□ -0.6
Smc5-201ENSMUST00000087556 Plekhg3Q4VAC9 1341 aa11.29□□□□□ -0.6
Smc5-201ENSMUST00000087556 Safb2Q80YR5 991 aaKnown RBP11.29□□□□□ -0.6
Smc5-201ENSMUST00000087556 Myt1lP97500 1187 aa11.26□□□□□ -0.61
Smc5-201ENSMUST00000087556 Ppp1r18Q8BQ30 594 aa11.24□□□□□ -0.61
Smc5-201ENSMUST00000087556 Ube2uB1AUC4 352 aa11.23□□□□□ -0.61
Smc5-201ENSMUST00000087556 Fkbp15Q6P9Q6 1216 aaKnown RBP11.21□□□□□ -0.61
Smc5-201ENSMUST00000087556 Pabpn1Q8CCS6 302 aaKnown RBP11.21□□□□□ -0.62
Smc5-201ENSMUST00000087556 MlecQ6ZQI3 291 aaKnown RBP11.2□□□□□ -0.62
Smc5-201ENSMUST00000087556 MyclP10166 368 aa11.14□□□□□ -0.63
Smc5-201ENSMUST00000087556 Gab3Q8BSM5 595 aa11.13□□□□□ -0.63
Smc5-201ENSMUST00000087556 Dnajc5bQ9CQ94 199 aa11.12□□□□□ -0.63
Smc5-201ENSMUST00000087556 Rb1cc1Q9ESK9 1588 aa11.12□□□□□ -0.63
Smc5-201ENSMUST00000087556 Kdm5dQ62240 1548 aa11.07□□□□□ -0.64
Smc5-201ENSMUST00000087556 Ecm2Q5FW85 670 aa11.07□□□□□ -0.64
Smc5-201ENSMUST00000087556 Kif15Q6P9L6 1387 aa10.99□□□□□ -0.65
Smc5-201ENSMUST00000087556 Phldb1Q6PDH0 1371 aaKnown RBP10.99□□□□□ -0.65
Smc5-201ENSMUST00000087556 Cyb5rlB1AS42 316 aa10.97□□□□□ -0.65
Smc5-201ENSMUST00000087556 Rsf1E9PWW9 1441 aaKnown RBP10.95□□□□□ -0.66
Smc5-201ENSMUST00000087556 Cep164Q5DU05 1446 aa10.95□□□□□ -0.66
Smc5-201ENSMUST00000087556 Gm13695A2AK44 830 aa10.93□□□□□ -0.66
Smc5-201ENSMUST00000087556 Sycp2Q9CUU3 1500 aa10.93□□□□□ -0.66
Smc5-201ENSMUST00000087556 Dnajc5P60904 198 aa10.87□□□□□ -0.67
Smc5-201ENSMUST00000087556 Atad2bE9Q166 1460 aaKnown RBP10.85□□□□□ -0.67
Smc5-201ENSMUST00000087556 Brd4Q9ESU6 1400 aaKnown RBP10.84□□□□□ -0.67
Smc5-201ENSMUST00000087556 AknaQ80VW7 1404 aa10.82□□□□□ -0.68
Smc5-201ENSMUST00000087556 Ap3b1Q9Z1T1 1105 aa10.8□□□□□ -0.68
Smc5-201ENSMUST00000087556 Arhgap27A2AB59 869 aa10.79□□□□□ -0.68
Smc5-201ENSMUST00000087556 Ccdc18Q640L5 1455 aa10.79□□□□□ -0.68
Smc5-201ENSMUST00000087556 Zbtb7cQ8VCZ7 619 aa10.78□□□□□ -0.68
Smc5-201ENSMUST00000087556 Fbln2P37889 1221 aa10.77□□□□□ -0.69
Smc5-201ENSMUST00000087556 Arid3cA6PWV5 409 aa10.76□□□□□ -0.69
Smc5-201ENSMUST00000087556 Hnrnpul2Q00PI9 745 aaKnown RBP10.75□□□□□ -0.69
Smc5-201ENSMUST00000087556 ScribQ80U72 1612 aa10.74□□□□□ -0.69
Smc5-201ENSMUST00000087556 NclP09405 707 aaKnown RBP10.72□□□□□ -0.69
Smc5-201ENSMUST00000087556 Cux2P70298 1426 aa10.71□□□□□ -0.69
Smc5-201ENSMUST00000087556 Atp1b4Q99ME6 356 aa10.71□□□□□ -0.69
Smc5-201ENSMUST00000087556 HrcG5E8J6 738 aa10.7□□□□□ -0.7
Smc5-201ENSMUST00000087556 Ggt6Q6PDE7 497 aa10.69□□□□□ -0.7
Smc5-201ENSMUST00000087556 Os9Q8K2C7 672 aa10.69□□□□□ -0.7
Smc5-201ENSMUST00000087556 Ccdc180J3QNE4 1664 aa10.68□□□□□ -0.7
Smc5-201ENSMUST00000087556 Mrc2Q64449 1479 aa10.68□□□□□ -0.7
Smc5-201ENSMUST00000087556 Bcl11bQ99PV8 884 aa10.64□□□□□ -0.71
Smc5-201ENSMUST00000087556 Kif7B7ZNG0 1348 aa10.64□□□□□ -0.71
Smc5-201ENSMUST00000087556 Ehmt2Q9Z148 1263 aaKnown RBP10.61□□□□□ -0.71
Smc5-201ENSMUST00000087556 Cc2d2aQ8CFW7 1633 aa10.61□□□□□ -0.71
Smc5-201ENSMUST00000087556 Cecr2E9Q2Z1 1453 aa10.61□□□□□ -0.71
Smc5-201ENSMUST00000087556 Baz1aO88379 1555 aa10.6□□□□□ -0.71
Smc5-201ENSMUST00000087556 Chic1Q8CBW7 227 aa10.59□□□□□ -0.71
Smc5-201ENSMUST00000087556 Erich6D3Z6S9 713 aa10.56□□□□□ -0.72
Smc5-201ENSMUST00000087556 Pip4k2bQ80XI4 416 aa10.56□□□□□ -0.72
Smc5-201ENSMUST00000087556 Lmod2Q3UHZ5 550 aa10.54□□□□□ -0.72
Smc5-201ENSMUST00000087556 P3h3Q8CG70 732 aa10.53□□□□□ -0.72
Smc5-201ENSMUST00000087556 Smarca4Q3TKT4 1613 aaKnown RBP10.49□□□□□ -0.73
Smc5-201ENSMUST00000087556 Soga1E1U8D0 1418 aa10.47□□□□□ -0.73
Smc5-201ENSMUST00000087556 Iqgap2Q3UQ44 1575 aa10.47□□□□□ -0.73
Smc5-201ENSMUST00000087556 Dcaf1Q80TR8 1506 aa10.47□□□□□ -0.73
Smc5-201ENSMUST00000087556 Smarca2Q6DIC0 1577 aa10.47□□□□□ -0.73
Smc5-201ENSMUST00000087556 Urb2E9Q7L1 1524 aaKnown RBP10.47□□□□□ -0.73
Smc5-201ENSMUST00000087556 Crybg2B7ZCC2 1516 aa10.45□□□□□ -0.74
Smc5-201ENSMUST00000087556 Dhx29Q6PGC1 1365 aaKnown RBP10.42□□□□□ -0.74
Smc5-201ENSMUST00000087556 Arid4bA2CG63 1314 aaKnown RBP10.41□□□□□ -0.74
Smc5-201ENSMUST00000087556 Fam50aQ9WV03 339 aaKnown RBP10.41□□□□□ -0.74
Smc5-201ENSMUST00000087556 Cdk11bP24788 784 aaKnown RBP10.36□□□□□ -0.75
Smc5-201ENSMUST00000087556 PtprkP35822 1457 aa10.35□□□□□ -0.75
Smc5-201ENSMUST00000087556 Lemd3Q9WU40 921 aa10.34□□□□□ -0.75
Smc5-201ENSMUST00000087556 Baz1bQ9Z277 1479 aa10.33□□□□□ -0.76
Smc5-201ENSMUST00000087556 LrpprcQ6PB66 1392 aaKnown RBP10.32□□□□□ -0.76
Smc5-201ENSMUST00000087556 Grwd1Q810D6 446 aaKnown RBP10.32□□□□□ -0.76
Smc5-201ENSMUST00000087556 Fgd6Q69ZL1 1399 aa10.32□□□□□ -0.76
Smc5-201ENSMUST00000087556 Top2bQ64511 1612 aa10.31□□□□□ -0.76
Smc5-201ENSMUST00000087556 CftrP26361 1476 aa10.3□□□□□ -0.76
Smc5-201ENSMUST00000087556 Shroom4Q1W617 1475 aa10.28□□□□□ -0.76
Smc5-201ENSMUST00000087556 Hdac5Q9Z2V6 1113 aa10.26□□□□□ -0.77
Smc5-201ENSMUST00000087556 Frmpd1A2AKB4 1549 aa10.26□□□□□ -0.77
Smc5-201ENSMUST00000087556 Gm156Q58A37 223 aa10.26□□□□□ -0.77
Smc5-201ENSMUST00000087556 Rpap1Q80TE0 1409 aa10.26□□□□□ -0.77
Smc5-201ENSMUST00000087556 Ubap1lG3UW59 384 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms