RNA–Protein interactions for RNA: ENSMUST00000085383.10

Scaf1-201, Transcript of Splicing factor, arginine/serine-rich 19, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scaf1, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1-201ENSMUST00000085383 NischQ80TM9 1593 aa19.8■□□□□ 0.76
Scaf1-201ENSMUST00000085383 Gm35339A0A140LHH9 1649 aa19.03■□□□□ 0.64
Scaf1-201ENSMUST00000085383 Rhox8Q6VSS7 320 aa18.96■□□□□ 0.63
Scaf1-201ENSMUST00000085383 Abcc9P70170 1546 aa18.94■□□□□ 0.62
Scaf1-201ENSMUST00000085383 Abcc8B2RUS7 1588 aa18.76■□□□□ 0.59
Scaf1-201ENSMUST00000085383 Rpgrip1Q9EPQ2 1331 aa18.03■□□□□ 0.48
Scaf1-201ENSMUST00000085383 Ehmt2Q9Z148 1263 aaKnown RBP17.97■□□□□ 0.47
Scaf1-201ENSMUST00000085383 ScribQ80U72 1612 aa17.61■□□□□ 0.41
Scaf1-201ENSMUST00000085383 Ccdc136Q3TVA9 1136 aa17.5■□□□□ 0.39
Scaf1-201ENSMUST00000085383 NacadQ5SWP3 1504 aa17.45■□□□□ 0.38
Scaf1-201ENSMUST00000085383 Kdm5dQ62240 1548 aa17.43■□□□□ 0.38
Scaf1-201ENSMUST00000085383 Acin1Q9JIX8 1338 aaKnown RBP17.38■□□□□ 0.37
Scaf1-201ENSMUST00000085383 Rb1cc1Q9ESK9 1588 aa17.32■□□□□ 0.36
Scaf1-201ENSMUST00000085383 Zcchc6Q5BLK4 1491 aaKnown RBP17.31■□□□□ 0.36
Scaf1-201ENSMUST00000085383 Dcaf1Q80TR8 1506 aa17.19■□□□□ 0.34
Scaf1-201ENSMUST00000085383 Pcgf6Q99NA9 353 aa17.15■□□□□ 0.34
Scaf1-201ENSMUST00000085383 Esf1Q3V1V3 845 aaKnown RBP17.01■□□□□ 0.31
Scaf1-201ENSMUST00000085383 Baz1aO88379 1555 aa17■□□□□ 0.31
Scaf1-201ENSMUST00000085383 Sycp2Q9CUU3 1500 aa16.99■□□□□ 0.31
Scaf1-201ENSMUST00000085383 Ccdc180J3QNE4 1664 aa16.99■□□□□ 0.31
Scaf1-201ENSMUST00000085383 Zeb1Q64318 1117 aa16.99■□□□□ 0.31
Scaf1-201ENSMUST00000085383 Trim41Q5NCC3 630 aa16.97■□□□□ 0.31
Scaf1-201ENSMUST00000085383 Cngb1E1AZ71 1325 aa16.9■□□□□ 0.3
Scaf1-201ENSMUST00000085383 Las1lA2BE28 776 aaKnown RBP16.82■□□□□ 0.28
Scaf1-201ENSMUST00000085383 Supt5hO55201 1082 aaKnown RBP16.78■□□□□ 0.28
Scaf1-201ENSMUST00000085383 Rtl1Q7M732 1744 aa16.77■□□□□ 0.28
Scaf1-201ENSMUST00000085383 HrcG5E8J6 738 aa16.73■□□□□ 0.27
Scaf1-201ENSMUST00000085383 Gab3Q8BSM5 595 aa16.73■□□□□ 0.27
Scaf1-201ENSMUST00000085383 Wdr66E9Q743 1299 aa16.65■□□□□ 0.26
Scaf1-201ENSMUST00000085383 Crybg2B7ZCC2 1516 aa16.58■□□□□ 0.25
Scaf1-201ENSMUST00000085383 BicraF8VPZ9 1578 aa16.51■□□□□ 0.23
Scaf1-201ENSMUST00000085383 Brd4Q9ESU6 1400 aaKnown RBP16.49■□□□□ 0.23
Scaf1-201ENSMUST00000085383 Neurod1Q60867 357 aa16.47■□□□□ 0.23
Scaf1-201ENSMUST00000085383 Cecr2E9Q2Z1 1453 aa16.47■□□□□ 0.23
Scaf1-201ENSMUST00000085383 Smarca2Q6DIC0 1577 aa16.42■□□□□ 0.22
Scaf1-201ENSMUST00000085383 NefmP08553 848 aa16.39■□□□□ 0.21
Scaf1-201ENSMUST00000085383 Pds5bQ4VA53 1446 aaKnown RBP16.38■□□□□ 0.21
Scaf1-201ENSMUST00000085383 Il27Q8K3I6 234 aa16.38■□□□□ 0.21
Scaf1-201ENSMUST00000085383 Ppargc1bQ8VHJ7 1014 aa16.29■□□□□ 0.2
Scaf1-201ENSMUST00000085383 UbtfP25976 765 aaKnown RBP16.25■□□□□ 0.19
Scaf1-201ENSMUST00000085383 Atad2bE9Q166 1460 aaKnown RBP16.23■□□□□ 0.19
Scaf1-201ENSMUST00000085383 Ercc6F8VPZ5 1481 aa16.23■□□□□ 0.19
Scaf1-201ENSMUST00000085383 Ubl4bQ9CQ84 188 aa16.22■□□□□ 0.19
Scaf1-201ENSMUST00000085383 CenpbP27790 599 aa16.2■□□□□ 0.18
Scaf1-201ENSMUST00000085383 Smarca4Q3TKT4 1613 aaKnown RBP16.2■□□□□ 0.18
Scaf1-201ENSMUST00000085383 Npm2Q80W85 207 aa16.18■□□□□ 0.18
Scaf1-201ENSMUST00000085383 Mier1Q5UAK0 511 aa16.18■□□□□ 0.18
Scaf1-201ENSMUST00000085383 Cdk11bP24788 784 aaKnown RBP16.16■□□□□ 0.18
Scaf1-201ENSMUST00000085383 CftrP26361 1476 aa16.15■□□□□ 0.18
Scaf1-201ENSMUST00000085383 Sall2Q9QX96 1004 aa16.15■□□□□ 0.18
Scaf1-201ENSMUST00000085383 Synj1Q8CHC4 1574 aa16.13■□□□□ 0.17
Scaf1-201ENSMUST00000085383 Myt1lP97500 1187 aa16.11■□□□□ 0.17
Scaf1-201ENSMUST00000085383 Chic1Q8CBW7 227 aa16.09■□□□□ 0.17
Scaf1-201ENSMUST00000085383 Csrnp3P59055 597 aa16.09■□□□□ 0.17
Scaf1-201ENSMUST00000085383 Nop58Q6DFW4 536 aaKnown RBP16.09■□□□□ 0.17
Scaf1-201ENSMUST00000085383 Iqgap2Q3UQ44 1575 aa16.08■□□□□ 0.17
Scaf1-201ENSMUST00000085383 Npm1Q61937 292 aaKnown RBP16.06■□□□□ 0.16
Scaf1-201ENSMUST00000085383 Golga3P55937 1487 aa16.03■□□□□ 0.16
Scaf1-201ENSMUST00000085383 Gm38655A0A286YDK6 273 aa15.99■□□□□ 0.15
Scaf1-201ENSMUST00000085383 Kif15Q6P9L6 1387 aa15.98■□□□□ 0.15
Scaf1-201ENSMUST00000085383 Dnajc5bQ9CQ94 199 aa15.98■□□□□ 0.15
Scaf1-201ENSMUST00000085383 Cttnbp2B9EJA2 1648 aa15.95■□□□□ 0.14
Scaf1-201ENSMUST00000085383 1700123L14RikQ3V2K7 440 aa15.95■□□□□ 0.14
Scaf1-201ENSMUST00000085383 Anks4bQ8K3X6 423 aa15.94■□□□□ 0.14
Scaf1-201ENSMUST00000085383 Rsf1E9PWW9 1441 aaKnown RBP15.94■□□□□ 0.14
Scaf1-201ENSMUST00000085383 Phldb1Q6PDH0 1371 aaKnown RBP15.89■□□□□ 0.13
Scaf1-201ENSMUST00000085383 Frmpd1A2AKB4 1549 aa15.85■□□□□ 0.13
Scaf1-201ENSMUST00000085383 Myt1Q8CFC2 1127 aa15.83■□□□□ 0.13
Scaf1-201ENSMUST00000085383 Cep164Q5DU05 1446 aa15.8■□□□□ 0.12
Scaf1-201ENSMUST00000085383 Ccdc88bQ4QRL3 1481 aa15.8■□□□□ 0.12
Scaf1-201ENSMUST00000085383 Wdr62Q3U3T8 1523 aa15.75■□□□□ 0.11
Scaf1-201ENSMUST00000085383 ClspnQ80YR7 1315 aa15.74■□□□□ 0.11
Scaf1-201ENSMUST00000085383 Aebp2Q9Z248 504 aaKnown RBP15.73■□□□□ 0.11
Scaf1-201ENSMUST00000085383 TonslQ6NZL6 1363 aa15.72■□□□□ 0.11
Scaf1-201ENSMUST00000085383 Cux2P70298 1426 aa15.71■□□□□ 0.11
Scaf1-201ENSMUST00000085383 Cc2d2aQ8CFW7 1633 aa15.7■□□□□ 0.1
Scaf1-201ENSMUST00000085383 Aplp2Q06335 707 aa15.69■□□□□ 0.1
Scaf1-201ENSMUST00000085383 Ccdc18Q640L5 1455 aa15.67■□□□□ 0.1
Scaf1-201ENSMUST00000085383 Fmn1Q05860 1466 aa15.66■□□□□ 0.1
Scaf1-201ENSMUST00000085383 Slc24a1Q91WD8 1130 aa15.66■□□□□ 0.1
Scaf1-201ENSMUST00000085383 Ap3b1Q9Z1T1 1105 aa15.63■□□□□ 0.09
Scaf1-201ENSMUST00000085383 Ube2uB1AUC4 352 aa15.61■□□□□ 0.09
Scaf1-201ENSMUST00000085383 Pelp1Q9DBD5 1123 aaKnown RBP15.6■□□□□ 0.09
Scaf1-201ENSMUST00000085383 DiexfQ8BTT6 772 aaKnown RBP15.58■□□□□ 0.08
Scaf1-201ENSMUST00000085383 Mapk8ip2Q9ERE9 830 aa15.57■□□□□ 0.08
Scaf1-201ENSMUST00000085383 Thoc2B1AZI6 1594 aaKnown RBP15.56■□□□□ 0.08
Scaf1-201ENSMUST00000085383 Tnnt3Q9QZ47 272 aa15.55■□□□□ 0.08
Scaf1-201ENSMUST00000085383 Plekhg3Q4VAC9 1341 aa15.54■□□□□ 0.08
Scaf1-201ENSMUST00000085383 Eid3Q3V124 375 aa15.51■□□□□ 0.07
Scaf1-201ENSMUST00000085383 Stra8P70278 393 aa15.48■□□□□ 0.07
Scaf1-201ENSMUST00000085383 Top2bQ64511 1612 aa15.46■□□□□ 0.06
Scaf1-201ENSMUST00000085383 NclP09405 707 aaKnown RBP15.45■□□□□ 0.06
Scaf1-201ENSMUST00000085383 Ttbk1Q6PCN3 1308 aa15.45■□□□□ 0.06
Scaf1-201ENSMUST00000085383 Mrc2Q64449 1479 aa15.44■□□□□ 0.06
Scaf1-201ENSMUST00000085383 LrpprcQ6PB66 1392 aaKnown RBP15.43■□□□□ 0.06
Scaf1-201ENSMUST00000085383 Dhx29Q6PGC1 1365 aaKnown RBP15.41■□□□□ 0.06
Scaf1-201ENSMUST00000085383 Fam135aQ6NS59 1506 aa15.41■□□□□ 0.06
Scaf1-201ENSMUST00000085383 Fam50aQ9WV03 339 aaKnown RBP15.39■□□□□ 0.05
Scaf1-201ENSMUST00000085383 Fam71e1A1L3C1 212 aa15.38■□□□□ 0.05
Scaf1-201ENSMUST00000085383 Eif5bQ05D44 1216 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 154.7 ms