RNA–Protein interactions for RNA: ENSMUST00000078830.10

Rtn4-202, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 3,615 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-202ENSMUST00000078830 NischQ80TM9 1593 aa22.93■■□□□ 1.26
Rtn4-202ENSMUST00000078830 Rhox8Q6VSS7 320 aa22.23■■□□□ 1.15
Rtn4-202ENSMUST00000078830 Abcc9P70170 1546 aa22.04■■□□□ 1.12
Rtn4-202ENSMUST00000078830 Gm35339A0A140LHH9 1649 aa21.89■■□□□ 1.09
Rtn4-202ENSMUST00000078830 Abcc8B2RUS7 1588 aa21.66■■□□□ 1.06
Rtn4-202ENSMUST00000078830 Ccdc136Q3TVA9 1136 aa20.61■□□□□ 0.89
Rtn4-202ENSMUST00000078830 Rtl1Q7M732 1744 aa20.34■□□□□ 0.85
Rtn4-202ENSMUST00000078830 Ccdc180J3QNE4 1664 aa20.26■□□□□ 0.83
Rtn4-202ENSMUST00000078830 Ehmt2Q9Z148 1263 aaKnown RBP20.15■□□□□ 0.82
Rtn4-202ENSMUST00000078830 ScribQ80U72 1612 aa20.15■□□□□ 0.82
Rtn4-202ENSMUST00000078830 Rb1cc1Q9ESK9 1588 aa20.08■□□□□ 0.8
Rtn4-202ENSMUST00000078830 Zcchc6Q5BLK4 1491 aaKnown RBP19.94■□□□□ 0.78
Rtn4-202ENSMUST00000078830 Kdm5dQ62240 1548 aa19.93■□□□□ 0.78
Rtn4-202ENSMUST00000078830 Dcaf1Q80TR8 1506 aa19.87■□□□□ 0.77
Rtn4-202ENSMUST00000078830 Trim41Q5NCC3 630 aa19.86■□□□□ 0.77
Rtn4-202ENSMUST00000078830 NacadQ5SWP3 1504 aa19.75■□□□□ 0.75
Rtn4-202ENSMUST00000078830 Baz1aO88379 1555 aa19.73■□□□□ 0.75
Rtn4-202ENSMUST00000078830 HrcG5E8J6 738 aa19.71■□□□□ 0.75
Rtn4-202ENSMUST00000078830 Cngb1E1AZ71 1325 aa19.7■□□□□ 0.74
Rtn4-202ENSMUST00000078830 Gab3Q8BSM5 595 aa19.56■□□□□ 0.72
Rtn4-202ENSMUST00000078830 Esf1Q3V1V3 845 aaKnown RBP19.45■□□□□ 0.7
Rtn4-202ENSMUST00000078830 Rpgrip1Q9EPQ2 1331 aa19.34■□□□□ 0.69
Rtn4-202ENSMUST00000078830 Acin1Q9JIX8 1338 aaKnown RBP19.32■□□□□ 0.68
Rtn4-202ENSMUST00000078830 Chic1Q8CBW7 227 aa19.31■□□□□ 0.68
Rtn4-202ENSMUST00000078830 Sycp2Q9CUU3 1500 aa19.29■□□□□ 0.68
Rtn4-202ENSMUST00000078830 Smarca2Q6DIC0 1577 aa19.2■□□□□ 0.66
Rtn4-202ENSMUST00000078830 Cecr2E9Q2Z1 1453 aa19.15■□□□□ 0.66
Rtn4-202ENSMUST00000078830 Crybg2B7ZCC2 1516 aa19.13■□□□□ 0.65
Rtn4-202ENSMUST00000078830 Brd4Q9ESU6 1400 aaKnown RBP19.07■□□□□ 0.64
Rtn4-202ENSMUST00000078830 Cep164Q5DU05 1446 aa19.05■□□□□ 0.64
Rtn4-202ENSMUST00000078830 Rsf1E9PWW9 1441 aaKnown RBP19.01■□□□□ 0.63
Rtn4-202ENSMUST00000078830 Ccdc88bQ4QRL3 1481 aa18.91■□□□□ 0.62
Rtn4-202ENSMUST00000078830 Myt1lP97500 1187 aa18.88■□□□□ 0.61
Rtn4-202ENSMUST00000078830 Golga3P55937 1487 aa18.84■□□□□ 0.61
Rtn4-202ENSMUST00000078830 BicraF8VPZ9 1578 aa18.83■□□□□ 0.61
Rtn4-202ENSMUST00000078830 Synj1Q8CHC4 1574 aa18.82■□□□□ 0.6
Rtn4-202ENSMUST00000078830 Npm2Q80W85 207 aa18.75■□□□□ 0.59
Rtn4-202ENSMUST00000078830 CftrP26361 1476 aa18.74■□□□□ 0.59
Rtn4-202ENSMUST00000078830 Zeb1Q64318 1117 aa18.71■□□□□ 0.59
Rtn4-202ENSMUST00000078830 UbtfP25976 765 aaKnown RBP18.69■□□□□ 0.58
Rtn4-202ENSMUST00000078830 Il27Q8K3I6 234 aa18.68■□□□□ 0.58
Rtn4-202ENSMUST00000078830 Pcgf6Q99NA9 353 aa18.63■□□□□ 0.57
Rtn4-202ENSMUST00000078830 Mier1Q5UAK0 511 aa18.6■□□□□ 0.57
Rtn4-202ENSMUST00000078830 Supt5hO55201 1082 aaKnown RBP18.51■□□□□ 0.55
Rtn4-202ENSMUST00000078830 Smarca4Q3TKT4 1613 aaKnown RBP18.45■□□□□ 0.54
Rtn4-202ENSMUST00000078830 Cttnbp2B9EJA2 1648 aa18.4■□□□□ 0.54
Rtn4-202ENSMUST00000078830 Ap3b1Q9Z1T1 1105 aa18.4■□□□□ 0.54
Rtn4-202ENSMUST00000078830 Plekhg3Q4VAC9 1341 aa18.37■□□□□ 0.53
Rtn4-202ENSMUST00000078830 NefmP08553 848 aa18.32■□□□□ 0.52
Rtn4-202ENSMUST00000078830 Cc2d2aQ8CFW7 1633 aa18.32■□□□□ 0.52
Rtn4-202ENSMUST00000078830 Iqgap2Q3UQ44 1575 aa18.28■□□□□ 0.52
Rtn4-202ENSMUST00000078830 Fmn1Q05860 1466 aa18.26■□□□□ 0.51
Rtn4-202ENSMUST00000078830 Top2bQ64511 1612 aa18.25■□□□□ 0.51
Rtn4-202ENSMUST00000078830 Wdr66E9Q743 1299 aa18.25■□□□□ 0.51
Rtn4-202ENSMUST00000078830 Ppargc1bQ8VHJ7 1014 aa18.24■□□□□ 0.51
Rtn4-202ENSMUST00000078830 Atad2bE9Q166 1460 aaKnown RBP18.23■□□□□ 0.51
Rtn4-202ENSMUST00000078830 Rapgef2Q8CHG7 1496 aa18.21■□□□□ 0.51
Rtn4-202ENSMUST00000078830 Pds5bQ4VA53 1446 aaKnown RBP18.2■□□□□ 0.5
Rtn4-202ENSMUST00000078830 Cep162Q6ZQ06 1403 aa18.19■□□□□ 0.5
Rtn4-202ENSMUST00000078830 Clip1Q922J3 1391 aa18.18■□□□□ 0.5
Rtn4-202ENSMUST00000078830 Kif15Q6P9L6 1387 aa18.17■□□□□ 0.5
Rtn4-202ENSMUST00000078830 Las1lA2BE28 776 aaKnown RBP18.12■□□□□ 0.49
Rtn4-202ENSMUST00000078830 Sall2Q9QX96 1004 aa18.08■□□□□ 0.48
Rtn4-202ENSMUST00000078830 Ubl4bQ9CQ84 188 aa18.06■□□□□ 0.48
Rtn4-202ENSMUST00000078830 Top2aQ01320 1528 aaKnown RBP18.06■□□□□ 0.48
Rtn4-202ENSMUST00000078830 Npm1Q61937 292 aaKnown RBP18.03■□□□□ 0.48
Rtn4-202ENSMUST00000078830 Lmod2Q3UHZ5 550 aa18■□□□□ 0.47
Rtn4-202ENSMUST00000078830 Frmpd1A2AKB4 1549 aa18■□□□□ 0.47
Rtn4-202ENSMUST00000078830 Ercc6F8VPZ5 1481 aa17.98■□□□□ 0.47
Rtn4-202ENSMUST00000078830 Eid3Q3V124 375 aa17.96■□□□□ 0.47
Rtn4-202ENSMUST00000078830 Aebp2Q9Z248 504 aaKnown RBP17.96■□□□□ 0.47
Rtn4-202ENSMUST00000078830 PtprkP35822 1457 aa17.94■□□□□ 0.46
Rtn4-202ENSMUST00000078830 Setd5Q5XJV7 1441 aa17.9■□□□□ 0.46
Rtn4-202ENSMUST00000078830 Fam50aQ9WV03 339 aaKnown RBP17.89■□□□□ 0.45
Rtn4-202ENSMUST00000078830 TonslQ6NZL6 1363 aa17.86■□□□□ 0.45
Rtn4-202ENSMUST00000078830 Neurod1Q60867 357 aa17.85■□□□□ 0.45
Rtn4-202ENSMUST00000078830 Wdr62Q3U3T8 1523 aa17.83■□□□□ 0.44
Rtn4-202ENSMUST00000078830 Eea1Q8BL66 1411 aa17.81■□□□□ 0.44
Rtn4-202ENSMUST00000078830 Arhgap35Q91YM2 1499 aa17.8■□□□□ 0.44
Rtn4-202ENSMUST00000078830 Ccdc18Q640L5 1455 aa17.79■□□□□ 0.44
Rtn4-202ENSMUST00000078830 Cux2P70298 1426 aa17.78■□□□□ 0.44
Rtn4-202ENSMUST00000078830 Ube2uB1AUC4 352 aa17.78■□□□□ 0.44
Rtn4-202ENSMUST00000078830 BlmO88700 1416 aa17.76■□□□□ 0.43
Rtn4-202ENSMUST00000078830 Phldb1Q6PDH0 1371 aaKnown RBP17.72■□□□□ 0.43
Rtn4-202ENSMUST00000078830 Baz1bQ9Z277 1479 aa17.7■□□□□ 0.42
Rtn4-202ENSMUST00000078830 Mapk8ip2Q9ERE9 830 aa17.66■□□□□ 0.42
Rtn4-202ENSMUST00000078830 Shroom4Q1W617 1475 aa17.66■□□□□ 0.42
Rtn4-202ENSMUST00000078830 Arap1Q4LDD4 1452 aa17.66■□□□□ 0.42
Rtn4-202ENSMUST00000078830 Lamc3Q9R0B6 1581 aa17.65■□□□□ 0.42
Rtn4-202ENSMUST00000078830 TnnQ80Z71 1560 aa17.63■□□□□ 0.41
Rtn4-202ENSMUST00000078830 ClspnQ80YR7 1315 aa17.63■□□□□ 0.41
Rtn4-202ENSMUST00000078830 Camsap1A2AHC3 1581 aa17.61■□□□□ 0.41
Rtn4-202ENSMUST00000078830 NrkQ9R0G8 1455 aa17.61■□□□□ 0.41
Rtn4-202ENSMUST00000078830 Grin2bQ01097 1482 aa17.59■□□□□ 0.41
Rtn4-202ENSMUST00000078830 Nop58Q6DFW4 536 aaKnown RBP17.59■□□□□ 0.41
Rtn4-202ENSMUST00000078830 LrpprcQ6PB66 1392 aaKnown RBP17.58■□□□□ 0.4
Rtn4-202ENSMUST00000078830 Cdk11bP24788 784 aaKnown RBP17.55■□□□□ 0.4
Rtn4-202ENSMUST00000078830 Chic2Q9D9G3 165 aa17.54■□□□□ 0.4
Rtn4-202ENSMUST00000078830 Dnajc5bQ9CQ94 199 aa17.53■□□□□ 0.4
Rtn4-202ENSMUST00000078830 Gm38655A0A286YDK6 273 aa17.53■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 167.1 ms