RNA–Protein interactions for RNA: ENSMUST00000078374.12

U2surp-201, Transcript of U2 snRNP-associated SURP motif-containing protein, mousemouse

TSL 1 (best) BASIC

Gene U2surp, Length 3,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2surp-201ENSMUST00000078374 Ube2uB1AUC4 352 aa14.52□□□□□ -0.08
U2surp-201ENSMUST00000078374 DiexfQ8BTT6 772 aaKnown RBP14.21□□□□□ -0.13
U2surp-201ENSMUST00000078374 Ttbk1Q6PCN3 1308 aa13.95□□□□□ -0.18
U2surp-201ENSMUST00000078374 NischQ80TM9 1593 aa13.94□□□□□ -0.18
U2surp-201ENSMUST00000078374 Rhox8Q6VSS7 320 aa13.69□□□□□ -0.22
U2surp-201ENSMUST00000078374 Plppr3Q7TPB0 716 aa13.68□□□□□ -0.22
U2surp-201ENSMUST00000078374 Gm35339A0A140LHH9 1649 aa13.65□□□□□ -0.22
U2surp-201ENSMUST00000078374 Ehmt2Q9Z148 1263 aaKnown RBP13.61□□□□□ -0.23
U2surp-201ENSMUST00000078374 Abcc9P70170 1546 aa13.51□□□□□ -0.25
U2surp-201ENSMUST00000078374 Abcc8B2RUS7 1588 aa13.38□□□□□ -0.27
U2surp-201ENSMUST00000078374 ArxO35085 564 aa13.31□□□□□ -0.28
U2surp-201ENSMUST00000078374 CatipB9EKE5 520 aa13.3□□□□□ -0.28
U2surp-201ENSMUST00000078374 Amer1Q7TS75 1132 aa13.07□□□□□ -0.32
U2surp-201ENSMUST00000078374 Bcl11aQ9QYE3 773 aa12.96□□□□□ -0.34
U2surp-201ENSMUST00000078374 ScribQ80U72 1612 aa12.91□□□□□ -0.34
U2surp-201ENSMUST00000078374 Ppargc1bQ8VHJ7 1014 aa12.75□□□□□ -0.37
U2surp-201ENSMUST00000078374 Kcna4Q61423 654 aa12.71□□□□□ -0.37
U2surp-201ENSMUST00000078374 UbtfP25976 765 aaKnown RBP12.65□□□□□ -0.38
U2surp-201ENSMUST00000078374 Arid3aQ62431 601 aa12.62□□□□□ -0.39
U2surp-201ENSMUST00000078374 Slc4a1apE9PX68 744 aa12.57□□□□□ -0.4
U2surp-201ENSMUST00000078374 Kdm5dQ62240 1548 aa12.56□□□□□ -0.4
U2surp-201ENSMUST00000078374 Q8BT18 775 aa12.51□□□□□ -0.41
U2surp-201ENSMUST00000078374 Aplp2Q06335 707 aa12.48□□□□□ -0.41
U2surp-201ENSMUST00000078374 NacadQ5SWP3 1504 aa12.47□□□□□ -0.41
U2surp-201ENSMUST00000078374 Prdm16A2A935 1275 aa12.37□□□□□ -0.43
U2surp-201ENSMUST00000078374 Mapk8ip2Q9ERE9 830 aa12.36□□□□□ -0.43
U2surp-201ENSMUST00000078374 Myt1Q8CFC2 1127 aa12.35□□□□□ -0.43
U2surp-201ENSMUST00000078374 Gtf3c5Q8R2T8 520 aa12.33□□□□□ -0.44
U2surp-201ENSMUST00000078374 PrkcshO08795 521 aa12.31□□□□□ -0.44
U2surp-201ENSMUST00000078374 Rsph4aQ8BYM7 716 aa12.31□□□□□ -0.44
U2surp-201ENSMUST00000078374 Dnajc5bQ9CQ94 199 aa12.29□□□□□ -0.44
U2surp-201ENSMUST00000078374 Ncbp3Q8BZR9 615 aaKnown RBP12.27□□□□□ -0.45
U2surp-201ENSMUST00000078374 Sycp2Q9CUU3 1500 aa12.24□□□□□ -0.45
U2surp-201ENSMUST00000078374 Eif5bQ05D44 1216 aaKnown RBP12.23□□□□□ -0.45
U2surp-201ENSMUST00000078374 Taok2Q6ZQ29 1240 aa12.19□□□□□ -0.46
U2surp-201ENSMUST00000078374 Prdm10Q3UTQ7 1184 aa12.17□□□□□ -0.46
U2surp-201ENSMUST00000078374 Rb1cc1Q9ESK9 1588 aa12.16□□□□□ -0.46
U2surp-201ENSMUST00000078374 TimelessQ9R1X4 1197 aa12.16□□□□□ -0.46
U2surp-201ENSMUST00000078374 CenpbP27790 599 aa12.13□□□□□ -0.47
U2surp-201ENSMUST00000078374 Zcchc6Q5BLK4 1491 aaKnown RBP12.11□□□□□ -0.47
U2surp-201ENSMUST00000078374 BicraF8VPZ9 1578 aa12.11□□□□□ -0.47
U2surp-201ENSMUST00000078374 BccipQ9CWI3 316 aa12.08□□□□□ -0.48
U2surp-201ENSMUST00000078374 Dcaf1Q80TR8 1506 aa12.06□□□□□ -0.48
U2surp-201ENSMUST00000078374 Gm38655A0A286YDK6 273 aa12.05□□□□□ -0.48
U2surp-201ENSMUST00000078374 Pcgf6Q99NA9 353 aa11.98□□□□□ -0.49
U2surp-201ENSMUST00000078374 Ccdc136Q3TVA9 1136 aa11.98□□□□□ -0.49
U2surp-201ENSMUST00000078374 Vsig10D3YX43 558 aa11.97□□□□□ -0.49
U2surp-201ENSMUST00000078374 HrcG5E8J6 738 aa11.95□□□□□ -0.5
U2surp-201ENSMUST00000078374 Fam71e1A1L3C1 212 aa11.89□□□□□ -0.51
U2surp-201ENSMUST00000078374 Baz1aO88379 1555 aa11.89□□□□□ -0.51
U2surp-201ENSMUST00000078374 Pknox2Q8BG99 474 aa11.87□□□□□ -0.51
U2surp-201ENSMUST00000078374 Cecr2E9Q2Z1 1453 aa11.78□□□□□ -0.52
U2surp-201ENSMUST00000078374 Pds5bQ4VA53 1446 aaKnown RBP11.76□□□□□ -0.53
U2surp-201ENSMUST00000078374 Ripply1Q2WG77 201 aa11.76□□□□□ -0.53
U2surp-201ENSMUST00000078374 4930567H17RikQ3V0K5 233 aa11.74□□□□□ -0.53
U2surp-201ENSMUST00000078374 Npm2Q80W85 207 aa11.73□□□□□ -0.53
U2surp-201ENSMUST00000078374 Rpgrip1Q9EPQ2 1331 aa11.72□□□□□ -0.53
U2surp-201ENSMUST00000078374 Pelp1Q9DBD5 1123 aaKnown RBP11.69□□□□□ -0.54
U2surp-201ENSMUST00000078374 Esf1Q3V1V3 845 aaKnown RBP11.68□□□□□ -0.54
U2surp-201ENSMUST00000078374 Scaf1Q5U4C3 1256 aaKnown RBP11.68□□□□□ -0.54
U2surp-201ENSMUST00000078374 Ube2q2Q8K2Z8 378 aa11.66□□□□□ -0.54
U2surp-201ENSMUST00000078374 Plcd4Q8K3R3 807 aa11.66□□□□□ -0.54
U2surp-201ENSMUST00000078374 Atad2bE9Q166 1460 aaKnown RBP11.65□□□□□ -0.55
U2surp-201ENSMUST00000078374 Znf326O88291 580 aa11.64□□□□□ -0.55
U2surp-201ENSMUST00000078374 Samd1D3YXK1 519 aa11.63□□□□□ -0.55
U2surp-201ENSMUST00000078374 Ubl4bQ9CQ84 188 aa11.62□□□□□ -0.55
U2surp-201ENSMUST00000078374 Znf316Q6PGE4 1016 aa11.61□□□□□ -0.55
U2surp-201ENSMUST00000078374 Ercc6F8VPZ5 1481 aa11.59□□□□□ -0.55
U2surp-201ENSMUST00000078374 Crybg2B7ZCC2 1516 aa11.58□□□□□ -0.56
U2surp-201ENSMUST00000078374 Ecm2Q5FW85 670 aa11.58□□□□□ -0.56
U2surp-201ENSMUST00000078374 NefmP08553 848 aa11.57□□□□□ -0.56
U2surp-201ENSMUST00000078374 Os9Q8K2C7 672 aa11.57□□□□□ -0.56
U2surp-201ENSMUST00000078374 Igsf3Q6ZQA6 1194 aa11.56□□□□□ -0.56
U2surp-201ENSMUST00000078374 Irx6Q9ER75 438 aa11.56□□□□□ -0.56
U2surp-201ENSMUST00000078374 Cc2d2aQ8CFW7 1633 aa11.56□□□□□ -0.56
U2surp-201ENSMUST00000078374 Skap1Q3UUV5 355 aa11.55□□□□□ -0.56
U2surp-201ENSMUST00000078374 Smarca2Q6DIC0 1577 aa11.54□□□□□ -0.56
U2surp-201ENSMUST00000078374 Smarca4Q3TKT4 1613 aaKnown RBP11.53□□□□□ -0.56
U2surp-201ENSMUST00000078374 Thoc2B1AZI6 1594 aaKnown RBP11.53□□□□□ -0.56
U2surp-201ENSMUST00000078374 Iqgap2Q3UQ44 1575 aa11.53□□□□□ -0.56
U2surp-201ENSMUST00000078374 Trim41Q5NCC3 630 aa11.52□□□□□ -0.57
U2surp-201ENSMUST00000078374 Podxl2Q8CAE9 603 aa11.49□□□□□ -0.57
U2surp-201ENSMUST00000078374 Fbxo3Q9DC63 480 aa11.48□□□□□ -0.57
U2surp-201ENSMUST00000078374 Cngb1E1AZ71 1325 aa11.48□□□□□ -0.57
U2surp-201ENSMUST00000078374 Il27Q8K3I6 234 aa11.47□□□□□ -0.57
U2surp-201ENSMUST00000078374 Frmpd1A2AKB4 1549 aa11.46□□□□□ -0.57
U2surp-201ENSMUST00000078374 Zbtb7cQ8VCZ7 619 aa11.44□□□□□ -0.58
U2surp-201ENSMUST00000078374 Las1lA2BE28 776 aaKnown RBP11.42□□□□□ -0.58
U2surp-201ENSMUST00000078374 Fgd1P52734 960 aa11.42□□□□□ -0.58
U2surp-201ENSMUST00000078374 NrdcQ8BHG1 1161 aa11.4□□□□□ -0.58
U2surp-201ENSMUST00000078374 Phldb1Q6PDH0 1371 aaKnown RBP11.4□□□□□ -0.58
U2surp-201ENSMUST00000078374 Cdk11bP24788 784 aaKnown RBP11.4□□□□□ -0.58
U2surp-201ENSMUST00000078374 Ccdc180J3QNE4 1664 aa11.39□□□□□ -0.59
U2surp-201ENSMUST00000078374 MyclP10166 368 aa11.39□□□□□ -0.59
U2surp-201ENSMUST00000078374 Synj1Q8CHC4 1574 aa11.38□□□□□ -0.59
U2surp-201ENSMUST00000078374 Wdr62Q3U3T8 1523 aa11.37□□□□□ -0.59
U2surp-201ENSMUST00000078374 Cers3Q1A3B0 383 aa11.37□□□□□ -0.59
U2surp-201ENSMUST00000078374 CftrP26361 1476 aa11.37□□□□□ -0.59
U2surp-201ENSMUST00000078374 Tshz2Q68FE9 1030 aa11.34□□□□□ -0.59
U2surp-201ENSMUST00000078374 Brd4Q9ESU6 1400 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms