RNA–Protein interactions for RNA: ENSMUST00000077569.10

Smarca1-201, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-201ENSMUST00000077569 Rhox8Q6VSS7 320 aa15.42■□□□□ 0.06
Smarca1-201ENSMUST00000077569 Ehmt2Q9Z148 1263 aaKnown RBP15.28■□□□□ 0.04
Smarca1-201ENSMUST00000077569 Rpgrip1Q9EPQ2 1331 aa15.22■□□□□ 0.03
Smarca1-201ENSMUST00000077569 Las1lA2BE28 776 aaKnown RBP14.7□□□□□ -0.06
Smarca1-201ENSMUST00000077569 Pcgf6Q99NA9 353 aa14.53□□□□□ -0.08
Smarca1-201ENSMUST00000077569 Zeb1Q64318 1117 aa14.5□□□□□ -0.09
Smarca1-201ENSMUST00000077569 Acin1Q9JIX8 1338 aaKnown RBP14.46□□□□□ -0.1
Smarca1-201ENSMUST00000077569 Gm35339A0A140LHH9 1649 aa14.39□□□□□ -0.11
Smarca1-201ENSMUST00000077569 Wdr66E9Q743 1299 aa14.26□□□□□ -0.13
Smarca1-201ENSMUST00000077569 Cngb1E1AZ71 1325 aa14.23□□□□□ -0.13
Smarca1-201ENSMUST00000077569 CenpbP27790 599 aa14.17□□□□□ -0.14
Smarca1-201ENSMUST00000077569 Supt5hO55201 1082 aaKnown RBP14.17□□□□□ -0.14
Smarca1-201ENSMUST00000077569 DiexfQ8BTT6 772 aaKnown RBP14.04□□□□□ -0.16
Smarca1-201ENSMUST00000077569 NischQ80TM9 1593 aa14.04□□□□□ -0.16
Smarca1-201ENSMUST00000077569 Neurod1Q60867 357 aa14□□□□□ -0.17
Smarca1-201ENSMUST00000077569 Ccdc136Q3TVA9 1136 aa13.89□□□□□ -0.19
Smarca1-201ENSMUST00000077569 Ppargc1bQ8VHJ7 1014 aa13.87□□□□□ -0.19
Smarca1-201ENSMUST00000077569 Gm38655A0A286YDK6 273 aa13.87□□□□□ -0.19
Smarca1-201ENSMUST00000077569 Ttbk1Q6PCN3 1308 aa13.86□□□□□ -0.19
Smarca1-201ENSMUST00000077569 Amer1Q7TS75 1132 aa13.86□□□□□ -0.19
Smarca1-201ENSMUST00000077569 Abcc9P70170 1546 aa13.85□□□□□ -0.19
Smarca1-201ENSMUST00000077569 Myt1Q8CFC2 1127 aa13.85□□□□□ -0.19
Smarca1-201ENSMUST00000077569 Csrnp3P59055 597 aa13.77□□□□□ -0.2
Smarca1-201ENSMUST00000077569 Gab3Q8BSM5 595 aa13.77□□□□□ -0.21
Smarca1-201ENSMUST00000077569 Cdk11bP24788 784 aaKnown RBP13.72□□□□□ -0.21
Smarca1-201ENSMUST00000077569 Pelp1Q9DBD5 1123 aaKnown RBP13.71□□□□□ -0.21
Smarca1-201ENSMUST00000077569 Trim41Q5NCC3 630 aa13.66□□□□□ -0.22
Smarca1-201ENSMUST00000077569 1700123L14RikQ3V2K7 440 aa13.64□□□□□ -0.23
Smarca1-201ENSMUST00000077569 Nop58Q6DFW4 536 aaKnown RBP13.62□□□□□ -0.23
Smarca1-201ENSMUST00000077569 NefmP08553 848 aa13.57□□□□□ -0.24
Smarca1-201ENSMUST00000077569 Abcc8B2RUS7 1588 aa13.51□□□□□ -0.25
Smarca1-201ENSMUST00000077569 Sall2Q9QX96 1004 aa13.47□□□□□ -0.25
Smarca1-201ENSMUST00000077569 UbtfP25976 765 aaKnown RBP13.46□□□□□ -0.26
Smarca1-201ENSMUST00000077569 Slc24a1Q91WD8 1130 aa13.46□□□□□ -0.26
Smarca1-201ENSMUST00000077569 Anks4bQ8K3X6 423 aa13.42□□□□□ -0.26
Smarca1-201ENSMUST00000077569 Bcl11aQ9QYE3 773 aa13.41□□□□□ -0.26
Smarca1-201ENSMUST00000077569 Aplp2Q06335 707 aa13.33□□□□□ -0.28
Smarca1-201ENSMUST00000077569 Mapk8ip2Q9ERE9 830 aa13.33□□□□□ -0.28
Smarca1-201ENSMUST00000077569 Ccdc180J3QNE4 1664 aa13.32□□□□□ -0.28
Smarca1-201ENSMUST00000077569 4933416C03RikQ3V063 378 aa13.27□□□□□ -0.29
Smarca1-201ENSMUST00000077569 HrcG5E8J6 738 aa13.26□□□□□ -0.29
Smarca1-201ENSMUST00000077569 Mier1Q5UAK0 511 aa13.26□□□□□ -0.29
Smarca1-201ENSMUST00000077569 Myt1lP97500 1187 aa13.23□□□□□ -0.29
Smarca1-201ENSMUST00000077569 Fam71e1A1L3C1 212 aa13.2□□□□□ -0.3
Smarca1-201ENSMUST00000077569 Tnnt3Q9QZ47 272 aa13.17□□□□□ -0.3
Smarca1-201ENSMUST00000077569 Eif5bQ05D44 1216 aaKnown RBP13.14□□□□□ -0.31
Smarca1-201ENSMUST00000077569 Ube2uB1AUC4 352 aa13.11□□□□□ -0.31
Smarca1-201ENSMUST00000077569 PrkcshO08795 521 aa13.09□□□□□ -0.31
Smarca1-201ENSMUST00000077569 Ap3b1Q9Z1T1 1105 aa13.09□□□□□ -0.31
Smarca1-201ENSMUST00000077569 Stra8P70278 393 aa13.07□□□□□ -0.32
Smarca1-201ENSMUST00000077569 Anp32aO35381 247 aa13.07□□□□□ -0.32
Smarca1-201ENSMUST00000077569 ClspnQ80YR7 1315 aa13.06□□□□□ -0.32
Smarca1-201ENSMUST00000077569 Esf1Q3V1V3 845 aaKnown RBP13.03□□□□□ -0.32
Smarca1-201ENSMUST00000077569 SafbD3YXK2 937 aaKnown RBP13.01□□□□□ -0.33
Smarca1-201ENSMUST00000077569 Rtl5Q5DTT4 599 aa12.99□□□□□ -0.33
Smarca1-201ENSMUST00000077569 TonslQ6NZL6 1363 aa12.99□□□□□ -0.33
Smarca1-201ENSMUST00000077569 Aebp2Q9Z248 504 aaKnown RBP12.97□□□□□ -0.33
Smarca1-201ENSMUST00000077569 DaxxO35613 739 aa12.96□□□□□ -0.34
Smarca1-201ENSMUST00000077569 Npm2Q80W85 207 aa12.95□□□□□ -0.34
Smarca1-201ENSMUST00000077569 Dcaf1Q80TR8 1506 aa12.93□□□□□ -0.34
Smarca1-201ENSMUST00000077569 Rtl1Q7M732 1744 aa12.9□□□□□ -0.34
Smarca1-201ENSMUST00000077569 Ifnlr1Q8CGK5 535 aa12.89□□□□□ -0.35
Smarca1-201ENSMUST00000077569 NclP09405 707 aaKnown RBP12.86□□□□□ -0.35
Smarca1-201ENSMUST00000077569 Hnrnpul2Q00PI9 745 aaKnown RBP12.84□□□□□ -0.35
Smarca1-201ENSMUST00000077569 Ppp4r2Q0VGB7 417 aa12.81□□□□□ -0.36
Smarca1-201ENSMUST00000077569 Eid3Q3V124 375 aa12.8□□□□□ -0.36
Smarca1-201ENSMUST00000077569 ScribQ80U72 1612 aa12.78□□□□□ -0.36
Smarca1-201ENSMUST00000077569 Calr4Q3TQS0 420 aa12.77□□□□□ -0.37
Smarca1-201ENSMUST00000077569 NrdcQ8BHG1 1161 aa12.73□□□□□ -0.37
Smarca1-201ENSMUST00000077569 Fam50aQ9WV03 339 aaKnown RBP12.68□□□□□ -0.38
Smarca1-201ENSMUST00000077569 4930567H17RikQ3V0K5 233 aa12.68□□□□□ -0.38
Smarca1-201ENSMUST00000077569 Zcchc6Q5BLK4 1491 aaKnown RBP12.64□□□□□ -0.39
Smarca1-201ENSMUST00000077569 Wdr43Q6ZQL4 677 aaKnown RBP12.62□□□□□ -0.39
Smarca1-201ENSMUST00000077569 Plekhg3Q4VAC9 1341 aa12.62□□□□□ -0.39
Smarca1-201ENSMUST00000077569 ArxO35085 564 aa12.62□□□□□ -0.39
Smarca1-201ENSMUST00000077569 NeflP08551 543 aa12.59□□□□□ -0.39
Smarca1-201ENSMUST00000077569 Hsp90aa1P07901 733 aaKnown RBP12.57□□□□□ -0.4
Smarca1-201ENSMUST00000077569 Zbtb7cQ8VCZ7 619 aa12.57□□□□□ -0.4
Smarca1-201ENSMUST00000077569 Hdac5Q9Z2V6 1113 aa12.56□□□□□ -0.4
Smarca1-201ENSMUST00000077569 P3h3Q8CG70 732 aa12.54□□□□□ -0.4
Smarca1-201ENSMUST00000077569 Irx3P81067 507 aa12.53□□□□□ -0.4
Smarca1-201ENSMUST00000077569 Chic1Q8CBW7 227 aa12.51□□□□□ -0.41
Smarca1-201ENSMUST00000077569 Taok2Q6ZQ29 1240 aa12.51□□□□□ -0.41
Smarca1-201ENSMUST00000077569 Pknox2Q8BG99 474 aa12.51□□□□□ -0.41
Smarca1-201ENSMUST00000077569 Ccdc27Q3V036 639 aa12.5□□□□□ -0.41
Smarca1-201ENSMUST00000077569 Slc4a3P16283 1227 aa12.46□□□□□ -0.41
Smarca1-201ENSMUST00000077569 Supt16hQ920B9 1047 aa12.46□□□□□ -0.41
Smarca1-201ENSMUST00000077569 Ythdc1E9Q5K9 736 aaKnown RBP12.46□□□□□ -0.42
Smarca1-201ENSMUST00000077569 Nolc1E9Q5C9 702 aaKnown RBP12.45□□□□□ -0.42
Smarca1-201ENSMUST00000077569 Gtf3c3Q3TMP1 882 aa12.44□□□□□ -0.42
Smarca1-201ENSMUST00000077569 Plcd4Q8K3R3 807 aa12.43□□□□□ -0.42
Smarca1-201ENSMUST00000077569 Zbtb4Q5F293 982 aa12.43□□□□□ -0.42
Smarca1-201ENSMUST00000077569 Upf2A2AT37 1269 aaKnown RBP12.42□□□□□ -0.42
Smarca1-201ENSMUST00000077569 Ccdc9Q8VC31 543 aaKnown RBP12.4□□□□□ -0.43
Smarca1-201ENSMUST00000077569 Anp32bQ9EST5 272 aaKnown RBP12.38□□□□□ -0.43
Smarca1-201ENSMUST00000077569 Lmod3E9QA62 571 aa12.37□□□□□ -0.43
Smarca1-201ENSMUST00000077569 Il27Q8K3I6 234 aa12.36□□□□□ -0.43
Smarca1-201ENSMUST00000077569 Cep164Q5DU05 1446 aa12.36□□□□□ -0.43
Smarca1-201ENSMUST00000077569 Mrs2Q5NCE8 434 aa12.36□□□□□ -0.43
Smarca1-201ENSMUST00000077569 CanxP35564 591 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms