RNA–Protein interactions for RNA: ENSMUST00000072639.9

Trim16-202, Transcript of Tripartite motif-containing protein 16, mousemouse

TSL 2 BASIC

Gene Trim16, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16-202ENSMUST00000072639 Gm35339A0A140LHH9 1649 aa21.31■■□□□ 1
Trim16-202ENSMUST00000072639 NischQ80TM9 1593 aa21.11■□□□□ 0.97
Trim16-202ENSMUST00000072639 Abcc9P70170 1546 aa20.53■□□□□ 0.88
Trim16-202ENSMUST00000072639 Abcc8B2RUS7 1588 aa20.33■□□□□ 0.85
Trim16-202ENSMUST00000072639 ScribQ80U72 1612 aa19.58■□□□□ 0.72
Trim16-202ENSMUST00000072639 Rtl1Q7M732 1744 aa19.54■□□□□ 0.72
Trim16-202ENSMUST00000072639 Rhox8Q6VSS7 320 aa19.47■□□□□ 0.71
Trim16-202ENSMUST00000072639 Ccdc180J3QNE4 1664 aa19.13■□□□□ 0.65
Trim16-202ENSMUST00000072639 Kdm5dQ62240 1548 aa18.93■□□□□ 0.62
Trim16-202ENSMUST00000072639 NacadQ5SWP3 1504 aa18.92■□□□□ 0.62
Trim16-202ENSMUST00000072639 Dcaf1Q80TR8 1506 aa18.83■□□□□ 0.6
Trim16-202ENSMUST00000072639 Zcchc6Q5BLK4 1491 aaKnown RBP18.67■□□□□ 0.58
Trim16-202ENSMUST00000072639 Sycp2Q9CUU3 1500 aa18.56■□□□□ 0.56
Trim16-202ENSMUST00000072639 Rb1cc1Q9ESK9 1588 aa18.5■□□□□ 0.55
Trim16-202ENSMUST00000072639 BicraF8VPZ9 1578 aa18.32■□□□□ 0.52
Trim16-202ENSMUST00000072639 Baz1aO88379 1555 aa18.32■□□□□ 0.52
Trim16-202ENSMUST00000072639 HrcG5E8J6 738 aa18.19■□□□□ 0.5
Trim16-202ENSMUST00000072639 Rpgrip1Q9EPQ2 1331 aa18.16■□□□□ 0.5
Trim16-202ENSMUST00000072639 Crybg2B7ZCC2 1516 aa18.07■□□□□ 0.48
Trim16-202ENSMUST00000072639 Ccdc136Q3TVA9 1136 aa18.02■□□□□ 0.47
Trim16-202ENSMUST00000072639 Smarca2Q6DIC0 1577 aa17.91■□□□□ 0.46
Trim16-202ENSMUST00000072639 Trim41Q5NCC3 630 aa17.8■□□□□ 0.44
Trim16-202ENSMUST00000072639 Acin1Q9JIX8 1338 aaKnown RBP17.76■□□□□ 0.43
Trim16-202ENSMUST00000072639 Pds5bQ4VA53 1446 aaKnown RBP17.73■□□□□ 0.43
Trim16-202ENSMUST00000072639 Dnajc5bQ9CQ94 199 aa17.66■□□□□ 0.42
Trim16-202ENSMUST00000072639 Cep164Q5DU05 1446 aa17.62■□□□□ 0.41
Trim16-202ENSMUST00000072639 Atad2bE9Q166 1460 aaKnown RBP17.59■□□□□ 0.41
Trim16-202ENSMUST00000072639 Thoc2B1AZI6 1594 aaKnown RBP17.59■□□□□ 0.41
Trim16-202ENSMUST00000072639 Smarca4Q3TKT4 1613 aaKnown RBP17.5■□□□□ 0.39
Trim16-202ENSMUST00000072639 Cecr2E9Q2Z1 1453 aa17.5■□□□□ 0.39
Trim16-202ENSMUST00000072639 Brd4Q9ESU6 1400 aaKnown RBP17.5■□□□□ 0.39
Trim16-202ENSMUST00000072639 Ehmt2Q9Z148 1263 aaKnown RBP17.43■□□□□ 0.38
Trim16-202ENSMUST00000072639 Iqgap2Q3UQ44 1575 aa17.4■□□□□ 0.38
Trim16-202ENSMUST00000072639 Ercc6F8VPZ5 1481 aa17.36■□□□□ 0.37
Trim16-202ENSMUST00000072639 Cc2d2aQ8CFW7 1633 aa17.31■□□□□ 0.36
Trim16-202ENSMUST00000072639 Golga3P55937 1487 aa17.3■□□□□ 0.36
Trim16-202ENSMUST00000072639 Rsf1E9PWW9 1441 aaKnown RBP17.29■□□□□ 0.36
Trim16-202ENSMUST00000072639 Synj1Q8CHC4 1574 aa17.27■□□□□ 0.36
Trim16-202ENSMUST00000072639 Cngb1E1AZ71 1325 aa17.25■□□□□ 0.35
Trim16-202ENSMUST00000072639 Wdr62Q3U3T8 1523 aa17.23■□□□□ 0.35
Trim16-202ENSMUST00000072639 Frmpd1A2AKB4 1549 aa17.22■□□□□ 0.35
Trim16-202ENSMUST00000072639 Chic1Q8CBW7 227 aa17.19■□□□□ 0.34
Trim16-202ENSMUST00000072639 Fam135aQ6NS59 1506 aa17.19■□□□□ 0.34
Trim16-202ENSMUST00000072639 CftrP26361 1476 aa17.19■□□□□ 0.34
Trim16-202ENSMUST00000072639 Ccdc88bQ4QRL3 1481 aa17.15■□□□□ 0.34
Trim16-202ENSMUST00000072639 Cttnbp2B9EJA2 1648 aa17.14■□□□□ 0.33
Trim16-202ENSMUST00000072639 Top2bQ64511 1612 aa17.12■□□□□ 0.33
Trim16-202ENSMUST00000072639 Phldb1Q6PDH0 1371 aaKnown RBP17.07■□□□□ 0.32
Trim16-202ENSMUST00000072639 Unc13aQ4KUS2 1712 aa17.03■□□□□ 0.32
Trim16-202ENSMUST00000072639 Esf1Q3V1V3 845 aaKnown RBP17.02■□□□□ 0.31
Trim16-202ENSMUST00000072639 Gab3Q8BSM5 595 aa17.02■□□□□ 0.31
Trim16-202ENSMUST00000072639 Baz1bQ9Z277 1479 aa16.95■□□□□ 0.3
Trim16-202ENSMUST00000072639 Pcgf6Q99NA9 353 aa16.95■□□□□ 0.3
Trim16-202ENSMUST00000072639 Ubl4bQ9CQ84 188 aa16.9■□□□□ 0.3
Trim16-202ENSMUST00000072639 Fmn1Q05860 1466 aa16.87■□□□□ 0.29
Trim16-202ENSMUST00000072639 NefmP08553 848 aa16.8■□□□□ 0.28
Trim16-202ENSMUST00000072639 Rapgef2Q8CHG7 1496 aa16.79■□□□□ 0.28
Trim16-202ENSMUST00000072639 Top2aQ01320 1528 aaKnown RBP16.79■□□□□ 0.28
Trim16-202ENSMUST00000072639 Mrc2Q64449 1479 aa16.78■□□□□ 0.28
Trim16-202ENSMUST00000072639 Mier1Q5UAK0 511 aa16.69■□□□□ 0.26
Trim16-202ENSMUST00000072639 Supt5hO55201 1082 aaKnown RBP16.64■□□□□ 0.26
Trim16-202ENSMUST00000072639 Cep162Q6ZQ06 1403 aa16.63■□□□□ 0.25
Trim16-202ENSMUST00000072639 Kif15Q6P9L6 1387 aa16.61■□□□□ 0.25
Trim16-202ENSMUST00000072639 Lamc3Q9R0B6 1581 aa16.59■□□□□ 0.25
Trim16-202ENSMUST00000072639 Cux2P70298 1426 aa16.58■□□□□ 0.24
Trim16-202ENSMUST00000072639 TnnQ80Z71 1560 aa16.57■□□□□ 0.24
Trim16-202ENSMUST00000072639 Eif4g1Q6NZJ6 1600 aaKnown RBP16.53■□□□□ 0.24
Trim16-202ENSMUST00000072639 Zeb1Q64318 1117 aa16.48■□□□□ 0.23
Trim16-202ENSMUST00000072639 Kif21aQ9QXL2 1672 aa16.47■□□□□ 0.23
Trim16-202ENSMUST00000072639 Lrriq1Q0P5X1 1673 aa16.44■□□□□ 0.22
Trim16-202ENSMUST00000072639 UbtfP25976 765 aaKnown RBP16.44■□□□□ 0.22
Trim16-202ENSMUST00000072639 Npm2Q80W85 207 aa16.44■□□□□ 0.22
Trim16-202ENSMUST00000072639 Myt1lP97500 1187 aa16.42■□□□□ 0.22
Trim16-202ENSMUST00000072639 Npm1Q61937 292 aaKnown RBP16.38■□□□□ 0.21
Trim16-202ENSMUST00000072639 Clip1Q922J3 1391 aa16.37■□□□□ 0.21
Trim16-202ENSMUST00000072639 NrkQ9R0G8 1455 aa16.36■□□□□ 0.21
Trim16-202ENSMUST00000072639 Arhgap35Q91YM2 1499 aa16.32■□□□□ 0.2
Trim16-202ENSMUST00000072639 Ccdc18Q640L5 1455 aa16.31■□□□□ 0.2
Trim16-202ENSMUST00000072639 Camsap1A2AHC3 1581 aa16.31■□□□□ 0.2
Trim16-202ENSMUST00000072639 Las1lA2BE28 776 aaKnown RBP16.3■□□□□ 0.2
Trim16-202ENSMUST00000072639 Sall2Q9QX96 1004 aa16.28■□□□□ 0.2
Trim16-202ENSMUST00000072639 Il27Q8K3I6 234 aa16.27■□□□□ 0.19
Trim16-202ENSMUST00000072639 Map3k1P53349 1493 aa16.26■□□□□ 0.19
Trim16-202ENSMUST00000072639 PtprkP35822 1457 aa16.25■□□□□ 0.19
Trim16-202ENSMUST00000072639 Shroom4Q1W617 1475 aa16.25■□□□□ 0.19
Trim16-202ENSMUST00000072639 Eea1Q8BL66 1411 aa16.25■□□□□ 0.19
Trim16-202ENSMUST00000072639 Dhx29Q6PGC1 1365 aaKnown RBP16.24■□□□□ 0.19
Trim16-202ENSMUST00000072639 LrpprcQ6PB66 1392 aaKnown RBP16.23■□□□□ 0.19
Trim16-202ENSMUST00000072639 Ncapd3Q6ZQK0 1506 aa16.22■□□□□ 0.19
Trim16-202ENSMUST00000072639 Urb2E9Q7L1 1524 aaKnown RBP16.2■□□□□ 0.18
Trim16-202ENSMUST00000072639 Neurod1Q60867 357 aa16.19■□□□□ 0.18
Trim16-202ENSMUST00000072639 Eif4g3Q80XI3 1579 aaKnown RBP16.19■□□□□ 0.18
Trim16-202ENSMUST00000072639 Plekhg3Q4VAC9 1341 aa16.18■□□□□ 0.18
Trim16-202ENSMUST00000072639 Plb1Q3TTY0 1478 aa16.17■□□□□ 0.18
Trim16-202ENSMUST00000072639 Arap1Q4LDD4 1452 aa16.17■□□□□ 0.18
Trim16-202ENSMUST00000072639 Crocc2F6XLV1 1638 aa16.17■□□□□ 0.18
Trim16-202ENSMUST00000072639 Arhgef5E9Q7D5 1581 aa16.16■□□□□ 0.18
Trim16-202ENSMUST00000072639 Grin2bQ01097 1482 aa16.15■□□□□ 0.18
Trim16-202ENSMUST00000072639 PogzQ8BZH4 1409 aaKnown RBP16.15■□□□□ 0.18
Trim16-202ENSMUST00000072639 TonslQ6NZL6 1363 aa16.13■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 163.8 ms