RNA–Protein interactions for RNA: ENSMUST00000072008.10

Sh3rf2-201, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf2, Length 5,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-201ENSMUST00000072008 Rhox8Q6VSS7 320 aa18.32■□□□□ 0.52
Sh3rf2-201ENSMUST00000072008 NischQ80TM9 1593 aa16.88■□□□□ 0.29
Sh3rf2-201ENSMUST00000072008 Rpgrip1Q9EPQ2 1331 aa16.45■□□□□ 0.22
Sh3rf2-201ENSMUST00000072008 Esf1Q3V1V3 845 aaKnown RBP16.31■□□□□ 0.2
Sh3rf2-201ENSMUST00000072008 Ccdc136Q3TVA9 1136 aa16.29■□□□□ 0.2
Sh3rf2-201ENSMUST00000072008 Trim41Q5NCC3 630 aa16.28■□□□□ 0.2
Sh3rf2-201ENSMUST00000072008 Cngb1E1AZ71 1325 aa16.17■□□□□ 0.18
Sh3rf2-201ENSMUST00000072008 Zeb1Q64318 1117 aa15.86■□□□□ 0.13
Sh3rf2-201ENSMUST00000072008 Npm2Q80W85 207 aa15.85■□□□□ 0.13
Sh3rf2-201ENSMUST00000072008 Abcc9P70170 1546 aa15.84■□□□□ 0.13
Sh3rf2-201ENSMUST00000072008 Ehmt2Q9Z148 1263 aaKnown RBP15.79■□□□□ 0.12
Sh3rf2-201ENSMUST00000072008 Gab3Q8BSM5 595 aa15.78■□□□□ 0.12
Sh3rf2-201ENSMUST00000072008 Las1lA2BE28 776 aaKnown RBP15.74■□□□□ 0.11
Sh3rf2-201ENSMUST00000072008 Rtl1Q7M732 1744 aa15.68■□□□□ 0.1
Sh3rf2-201ENSMUST00000072008 Ccdc180J3QNE4 1664 aa15.67■□□□□ 0.1
Sh3rf2-201ENSMUST00000072008 Ube2uB1AUC4 352 aa15.62■□□□□ 0.09
Sh3rf2-201ENSMUST00000072008 Myt1lP97500 1187 aa15.58■□□□□ 0.09
Sh3rf2-201ENSMUST00000072008 HrcG5E8J6 738 aa15.54■□□□□ 0.08
Sh3rf2-201ENSMUST00000072008 Abcc8B2RUS7 1588 aa15.51■□□□□ 0.07
Sh3rf2-201ENSMUST00000072008 Wdr66E9Q743 1299 aa15.49■□□□□ 0.07
Sh3rf2-201ENSMUST00000072008 Zcchc6Q5BLK4 1491 aaKnown RBP15.48■□□□□ 0.07
Sh3rf2-201ENSMUST00000072008 NefmP08553 848 aa15.33■□□□□ 0.04
Sh3rf2-201ENSMUST00000072008 Gm35339A0A140LHH9 1649 aa15.27■□□□□ 0.04
Sh3rf2-201ENSMUST00000072008 Il27Q8K3I6 234 aa15.24■□□□□ 0.03
Sh3rf2-201ENSMUST00000072008 Acin1Q9JIX8 1338 aaKnown RBP15.24■□□□□ 0.03
Sh3rf2-201ENSMUST00000072008 UbtfP25976 765 aaKnown RBP15.17■□□□□ 0.02
Sh3rf2-201ENSMUST00000072008 Pelp1Q9DBD5 1123 aaKnown RBP15.12■□□□□ 0.01
Sh3rf2-201ENSMUST00000072008 Stra8P70278 393 aa15.04■□□□□ -0
Sh3rf2-201ENSMUST00000072008 Brd4Q9ESU6 1400 aaKnown RBP14.94□□□□□ -0.02
Sh3rf2-201ENSMUST00000072008 Npm1Q61937 292 aaKnown RBP14.93□□□□□ -0.02
Sh3rf2-201ENSMUST00000072008 Rb1cc1Q9ESK9 1588 aa14.84□□□□□ -0.03
Sh3rf2-201ENSMUST00000072008 Fam50aQ9WV03 339 aaKnown RBP14.81□□□□□ -0.04
Sh3rf2-201ENSMUST00000072008 Ap3b1Q9Z1T1 1105 aa14.8□□□□□ -0.04
Sh3rf2-201ENSMUST00000072008 NacadQ5SWP3 1504 aa14.8□□□□□ -0.04
Sh3rf2-201ENSMUST00000072008 Anp32bQ9EST5 272 aaKnown RBP14.75□□□□□ -0.05
Sh3rf2-201ENSMUST00000072008 NclP09405 707 aaKnown RBP14.71□□□□□ -0.05
Sh3rf2-201ENSMUST00000072008 CenpbP27790 599 aa14.63□□□□□ -0.07
Sh3rf2-201ENSMUST00000072008 Dcaf1Q80TR8 1506 aa14.62□□□□□ -0.07
Sh3rf2-201ENSMUST00000072008 Cep164Q5DU05 1446 aa14.6□□□□□ -0.07
Sh3rf2-201ENSMUST00000072008 NrdcQ8BHG1 1161 aa14.6□□□□□ -0.07
Sh3rf2-201ENSMUST00000072008 TonslQ6NZL6 1363 aa14.59□□□□□ -0.07
Sh3rf2-201ENSMUST00000072008 Cdk11bP24788 784 aaKnown RBP14.58□□□□□ -0.07
Sh3rf2-201ENSMUST00000072008 Baz1aO88379 1555 aa14.57□□□□□ -0.08
Sh3rf2-201ENSMUST00000072008 Os9Q8K2C7 672 aa14.57□□□□□ -0.08
Sh3rf2-201ENSMUST00000072008 Slc24a1Q91WD8 1130 aa14.56□□□□□ -0.08
Sh3rf2-201ENSMUST00000072008 Myt1Q8CFC2 1127 aa14.53□□□□□ -0.08
Sh3rf2-201ENSMUST00000072008 Neurod1Q60867 357 aa14.53□□□□□ -0.08
Sh3rf2-201ENSMUST00000072008 Ubl4bQ9CQ84 188 aa14.52□□□□□ -0.08
Sh3rf2-201ENSMUST00000072008 Tnnt3Q9QZ47 272 aa14.52□□□□□ -0.08
Sh3rf2-201ENSMUST00000072008 Hdac5Q9Z2V6 1113 aa14.5□□□□□ -0.09
Sh3rf2-201ENSMUST00000072008 Mier1Q5UAK0 511 aa14.48□□□□□ -0.09
Sh3rf2-201ENSMUST00000072008 Lmod2Q3UHZ5 550 aa14.47□□□□□ -0.09
Sh3rf2-201ENSMUST00000072008 Clip1Q922J3 1391 aa14.44□□□□□ -0.1
Sh3rf2-201ENSMUST00000072008 Plekhg3Q4VAC9 1341 aa14.44□□□□□ -0.1
Sh3rf2-201ENSMUST00000072008 Nop58Q6DFW4 536 aaKnown RBP14.42□□□□□ -0.1
Sh3rf2-201ENSMUST00000072008 Pcgf6Q99NA9 353 aa14.39□□□□□ -0.11
Sh3rf2-201ENSMUST00000072008 Ccer2J3QPU5 274 aa14.39□□□□□ -0.11
Sh3rf2-201ENSMUST00000072008 NeflP08551 543 aa14.38□□□□□ -0.11
Sh3rf2-201ENSMUST00000072008 Chic1Q8CBW7 227 aa14.37□□□□□ -0.11
Sh3rf2-201ENSMUST00000072008 Ercc6F8VPZ5 1481 aa14.37□□□□□ -0.11
Sh3rf2-201ENSMUST00000072008 Kdm5dQ62240 1548 aa14.35□□□□□ -0.11
Sh3rf2-201ENSMUST00000072008 Rsf1E9PWW9 1441 aaKnown RBP14.35□□□□□ -0.11
Sh3rf2-201ENSMUST00000072008 Golga3P55937 1487 aa14.33□□□□□ -0.12
Sh3rf2-201ENSMUST00000072008 Hnrnpul2Q00PI9 745 aaKnown RBP14.31□□□□□ -0.12
Sh3rf2-201ENSMUST00000072008 Gm13697A2AK42 830 aa14.28□□□□□ -0.12
Sh3rf2-201ENSMUST00000072008 Amer1Q7TS75 1132 aa14.27□□□□□ -0.13
Sh3rf2-201ENSMUST00000072008 ClspnQ80YR7 1315 aa14.25□□□□□ -0.13
Sh3rf2-201ENSMUST00000072008 Kif15Q6P9L6 1387 aa14.24□□□□□ -0.13
Sh3rf2-201ENSMUST00000072008 Ccdc18Q640L5 1455 aa14.23□□□□□ -0.13
Sh3rf2-201ENSMUST00000072008 Zbtb7cQ8VCZ7 619 aa14.23□□□□□ -0.13
Sh3rf2-201ENSMUST00000072008 Ifnlr1Q8CGK5 535 aa14.21□□□□□ -0.13
Sh3rf2-201ENSMUST00000072008 Pds5bQ4VA53 1446 aaKnown RBP14.19□□□□□ -0.14
Sh3rf2-201ENSMUST00000072008 DiexfQ8BTT6 772 aaKnown RBP14.18□□□□□ -0.14
Sh3rf2-201ENSMUST00000072008 Clstn2Q9ER65 966 aa14.17□□□□□ -0.14
Sh3rf2-201ENSMUST00000072008 Supt5hO55201 1082 aaKnown RBP14.17□□□□□ -0.14
Sh3rf2-201ENSMUST00000072008 Fkbp15Q6P9Q6 1216 aaKnown RBP14.17□□□□□ -0.14
Sh3rf2-201ENSMUST00000072008 Eif5bQ05D44 1216 aaKnown RBP14.15□□□□□ -0.14
Sh3rf2-201ENSMUST00000072008 Setd5Q5XJV7 1441 aa14.13□□□□□ -0.15
Sh3rf2-201ENSMUST00000072008 Erich6D3Z6S9 713 aa14.13□□□□□ -0.15
Sh3rf2-201ENSMUST00000072008 BlmO88700 1416 aa14.13□□□□□ -0.15
Sh3rf2-201ENSMUST00000072008 Crybg2B7ZCC2 1516 aa14.11□□□□□ -0.15
Sh3rf2-201ENSMUST00000072008 Ppargc1bQ8VHJ7 1014 aa14.08□□□□□ -0.16
Sh3rf2-201ENSMUST00000072008 Sycp2Q9CUU3 1500 aa14.07□□□□□ -0.16
Sh3rf2-201ENSMUST00000072008 Atp1b4Q99ME6 356 aa14.07□□□□□ -0.16
Sh3rf2-201ENSMUST00000072008 Ttbk1Q6PCN3 1308 aa14.05□□□□□ -0.16
Sh3rf2-201ENSMUST00000072008 Eea1Q8BL66 1411 aa14.04□□□□□ -0.16
Sh3rf2-201ENSMUST00000072008 Gm13695A2AK44 830 aa14.04□□□□□ -0.16
Sh3rf2-201ENSMUST00000072008 Nlrp6Q91WS2 869 aa14.03□□□□□ -0.16
Sh3rf2-201ENSMUST00000072008 Eid3Q3V124 375 aa14.01□□□□□ -0.17
Sh3rf2-201ENSMUST00000072008 Rtl5Q5DTT4 599 aa13.98□□□□□ -0.17
Sh3rf2-201ENSMUST00000072008 Fmn1Q05860 1466 aa13.95□□□□□ -0.18
Sh3rf2-201ENSMUST00000072008 Chic2Q9D9G3 165 aa13.95□□□□□ -0.18
Sh3rf2-201ENSMUST00000072008 Zbtb4Q5F293 982 aa13.89□□□□□ -0.19
Sh3rf2-201ENSMUST00000072008 Arhgap27A2AB59 869 aa13.87□□□□□ -0.19
Sh3rf2-201ENSMUST00000072008 Upf2A2AT37 1269 aaKnown RBP13.86□□□□□ -0.19
Sh3rf2-201ENSMUST00000072008 4933416C03RikQ3V063 378 aa13.85□□□□□ -0.19
Sh3rf2-201ENSMUST00000072008 Safb2Q80YR5 991 aaKnown RBP13.83□□□□□ -0.2
Sh3rf2-201ENSMUST00000072008 Mia2Q91ZV0 1396 aa13.82□□□□□ -0.2
Sh3rf2-201ENSMUST00000072008 Atad2bE9Q166 1460 aaKnown RBP13.81□□□□□ -0.2
Sh3rf2-201ENSMUST00000072008 Anp32aO35381 247 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 84.9 ms