RNA–Protein interactions for RNA: ENSMUST00000062317.4

Shroom2-201, Transcript of Protein Shroom2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shroom2, Length 6,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2-201ENSMUST00000062317 Rhox8Q6VSS7 320 aa18.6■□□□□ 0.57
Shroom2-201ENSMUST00000062317 Ehmt2Q9Z148 1263 aaKnown RBP17.41■□□□□ 0.38
Shroom2-201ENSMUST00000062317 Ccdc136Q3TVA9 1136 aa16.71■□□□□ 0.27
Shroom2-201ENSMUST00000062317 Rpgrip1Q9EPQ2 1331 aa16.7■□□□□ 0.26
Shroom2-201ENSMUST00000062317 Zeb1Q64318 1117 aa16.44■□□□□ 0.22
Shroom2-201ENSMUST00000062317 Gab3Q8BSM5 595 aa16.41■□□□□ 0.22
Shroom2-201ENSMUST00000062317 Cngb1E1AZ71 1325 aa16.4■□□□□ 0.22
Shroom2-201ENSMUST00000062317 Wdr66E9Q743 1299 aa16.4■□□□□ 0.22
Shroom2-201ENSMUST00000062317 Esf1Q3V1V3 845 aaKnown RBP16.21■□□□□ 0.19
Shroom2-201ENSMUST00000062317 NischQ80TM9 1593 aa16.16■□□□□ 0.18
Shroom2-201ENSMUST00000062317 Trim41Q5NCC3 630 aa16.1■□□□□ 0.17
Shroom2-201ENSMUST00000062317 Las1lA2BE28 776 aaKnown RBP16.09■□□□□ 0.17
Shroom2-201ENSMUST00000062317 Myt1lP97500 1187 aa16■□□□□ 0.15
Shroom2-201ENSMUST00000062317 Ube2uB1AUC4 352 aa15.98■□□□□ 0.15
Shroom2-201ENSMUST00000062317 Acin1Q9JIX8 1338 aaKnown RBP15.92■□□□□ 0.14
Shroom2-201ENSMUST00000062317 Npm2Q80W85 207 aa15.89■□□□□ 0.13
Shroom2-201ENSMUST00000062317 UbtfP25976 765 aaKnown RBP15.8■□□□□ 0.12
Shroom2-201ENSMUST00000062317 Ppargc1bQ8VHJ7 1014 aa15.68■□□□□ 0.1
Shroom2-201ENSMUST00000062317 Slc24a1Q91WD8 1130 aa15.62■□□□□ 0.09
Shroom2-201ENSMUST00000062317 Pcgf6Q99NA9 353 aa15.61■□□□□ 0.09
Shroom2-201ENSMUST00000062317 CenpbP27790 599 aa15.45■□□□□ 0.06
Shroom2-201ENSMUST00000062317 NefmP08553 848 aa15.44■□□□□ 0.06
Shroom2-201ENSMUST00000062317 Supt5hO55201 1082 aaKnown RBP15.44■□□□□ 0.06
Shroom2-201ENSMUST00000062317 Pelp1Q9DBD5 1123 aaKnown RBP15.44■□□□□ 0.06
Shroom2-201ENSMUST00000062317 Ccdc180J3QNE4 1664 aa15.43■□□□□ 0.06
Shroom2-201ENSMUST00000062317 Il27Q8K3I6 234 aa15.37■□□□□ 0.05
Shroom2-201ENSMUST00000062317 Ap3b1Q9Z1T1 1105 aa15.36■□□□□ 0.05
Shroom2-201ENSMUST00000062317 Amer1Q7TS75 1132 aa15.3■□□□□ 0.04
Shroom2-201ENSMUST00000062317 HrcG5E8J6 738 aa15.29■□□□□ 0.04
Shroom2-201ENSMUST00000062317 Cdk11bP24788 784 aaKnown RBP15.28■□□□□ 0.04
Shroom2-201ENSMUST00000062317 Ttbk1Q6PCN3 1308 aa15.27■□□□□ 0.03
Shroom2-201ENSMUST00000062317 Neurod1Q60867 357 aa15.2■□□□□ 0.02
Shroom2-201ENSMUST00000062317 Nop58Q6DFW4 536 aaKnown RBP15.18■□□□□ 0.02
Shroom2-201ENSMUST00000062317 Zcchc6Q5BLK4 1491 aaKnown RBP15.17■□□□□ 0.02
Shroom2-201ENSMUST00000062317 Fam50aQ9WV03 339 aaKnown RBP15.17■□□□□ 0.02
Shroom2-201ENSMUST00000062317 Gm35339A0A140LHH9 1649 aa15.15■□□□□ 0.02
Shroom2-201ENSMUST00000062317 Eif5bQ05D44 1216 aaKnown RBP15.13■□□□□ 0.01
Shroom2-201ENSMUST00000062317 Abcc9P70170 1546 aa15.13■□□□□ 0.01
Shroom2-201ENSMUST00000062317 Mier1Q5UAK0 511 aa15.12■□□□□ 0.01
Shroom2-201ENSMUST00000062317 Rtl1Q7M732 1744 aa15.12■□□□□ 0.01
Shroom2-201ENSMUST00000062317 NclP09405 707 aaKnown RBP15.06■□□□□ 0
Shroom2-201ENSMUST00000062317 Gm38655A0A286YDK6 273 aa15.05■□□□□ -0
Shroom2-201ENSMUST00000062317 Stra8P70278 393 aa15.02■□□□□ -0
Shroom2-201ENSMUST00000062317 Mapk8ip2Q9ERE9 830 aa14.99□□□□□ -0.01
Shroom2-201ENSMUST00000062317 TonslQ6NZL6 1363 aa14.96□□□□□ -0.02
Shroom2-201ENSMUST00000062317 Plekhg3Q4VAC9 1341 aa14.92□□□□□ -0.02
Shroom2-201ENSMUST00000062317 NrdcQ8BHG1 1161 aa14.87□□□□□ -0.03
Shroom2-201ENSMUST00000062317 Lmod2Q3UHZ5 550 aa14.85□□□□□ -0.03
Shroom2-201ENSMUST00000062317 4933416C03RikQ3V063 378 aa14.82□□□□□ -0.04
Shroom2-201ENSMUST00000062317 Zbtb7cQ8VCZ7 619 aa14.82□□□□□ -0.04
Shroom2-201ENSMUST00000062317 Eid3Q3V124 375 aa14.79□□□□□ -0.04
Shroom2-201ENSMUST00000062317 Sall2Q9QX96 1004 aa14.79□□□□□ -0.04
Shroom2-201ENSMUST00000062317 Csrnp3P59055 597 aa14.77□□□□□ -0.05
Shroom2-201ENSMUST00000062317 Tnnt3Q9QZ47 272 aa14.76□□□□□ -0.05
Shroom2-201ENSMUST00000062317 Zbtb4Q5F293 982 aa14.75□□□□□ -0.05
Shroom2-201ENSMUST00000062317 Chic1Q8CBW7 227 aa14.71□□□□□ -0.05
Shroom2-201ENSMUST00000062317 Os9Q8K2C7 672 aa14.71□□□□□ -0.05
Shroom2-201ENSMUST00000062317 ClspnQ80YR7 1315 aa14.66□□□□□ -0.06
Shroom2-201ENSMUST00000062317 Abcc8B2RUS7 1588 aa14.65□□□□□ -0.06
Shroom2-201ENSMUST00000062317 NeflP08551 543 aa14.64□□□□□ -0.07
Shroom2-201ENSMUST00000062317 Anp32bQ9EST5 272 aaKnown RBP14.57□□□□□ -0.08
Shroom2-201ENSMUST00000062317 Prdm10Q3UTQ7 1184 aa14.55□□□□□ -0.08
Shroom2-201ENSMUST00000062317 Myt1Q8CFC2 1127 aa14.51□□□□□ -0.09
Shroom2-201ENSMUST00000062317 Ifnlr1Q8CGK5 535 aa14.49□□□□□ -0.09
Shroom2-201ENSMUST00000062317 Hnrnpul2Q00PI9 745 aaKnown RBP14.49□□□□□ -0.09
Shroom2-201ENSMUST00000062317 ArxO35085 564 aa14.46□□□□□ -0.09
Shroom2-201ENSMUST00000062317 Dcaf1Q80TR8 1506 aa14.44□□□□□ -0.1
Shroom2-201ENSMUST00000062317 Anks4bQ8K3X6 423 aa14.44□□□□□ -0.1
Shroom2-201ENSMUST00000062317 Anp32aO35381 247 aa14.42□□□□□ -0.1
Shroom2-201ENSMUST00000062317 Npm1Q61937 292 aaKnown RBP14.41□□□□□ -0.1
Shroom2-201ENSMUST00000062317 Clip1Q922J3 1391 aa14.4□□□□□ -0.1
Shroom2-201ENSMUST00000062317 DaxxO35613 739 aa14.39□□□□□ -0.11
Shroom2-201ENSMUST00000062317 Aebp2Q9Z248 504 aaKnown RBP14.39□□□□□ -0.11
Shroom2-201ENSMUST00000062317 Erich6D3Z6S9 713 aa14.37□□□□□ -0.11
Shroom2-201ENSMUST00000062317 DiexfQ8BTT6 772 aaKnown RBP14.37□□□□□ -0.11
Shroom2-201ENSMUST00000062317 Fkbp15Q6P9Q6 1216 aaKnown RBP14.37□□□□□ -0.11
Shroom2-201ENSMUST00000062317 Cep164Q5DU05 1446 aa14.37□□□□□ -0.11
Shroom2-201ENSMUST00000062317 Polr3glQ8R0C0 218 aa14.34□□□□□ -0.11
Shroom2-201ENSMUST00000062317 Chic2Q9D9G3 165 aa14.32□□□□□ -0.12
Shroom2-201ENSMUST00000062317 Rangap1P46061 589 aaKnown RBP14.31□□□□□ -0.12
Shroom2-201ENSMUST00000062317 Ppp4r2Q0VGB7 417 aa14.3□□□□□ -0.12
Shroom2-201ENSMUST00000062317 Rb1cc1Q9ESK9 1588 aa14.28□□□□□ -0.12
Shroom2-201ENSMUST00000062317 1700123L14RikQ3V2K7 440 aa14.26□□□□□ -0.13
Shroom2-201ENSMUST00000062317 Calr4Q3TQS0 420 aa14.24□□□□□ -0.13
Shroom2-201ENSMUST00000062317 Rad21Q61550 635 aaKnown RBP14.23□□□□□ -0.13
Shroom2-201ENSMUST00000062317 Aplp2Q06335 707 aa14.23□□□□□ -0.13
Shroom2-201ENSMUST00000062317 Rtl5Q5DTT4 599 aa14.22□□□□□ -0.13
Shroom2-201ENSMUST00000062317 Nlrp6Q91WS2 869 aa14.22□□□□□ -0.13
Shroom2-201ENSMUST00000062317 Brd4Q9ESU6 1400 aaKnown RBP14.21□□□□□ -0.13
Shroom2-201ENSMUST00000062317 Atp1b4Q99ME6 356 aa14.21□□□□□ -0.14
Shroom2-201ENSMUST00000062317 4930567H17RikQ3V0K5 233 aa14.21□□□□□ -0.14
Shroom2-201ENSMUST00000062317 P3h3Q8CG70 732 aa14.17□□□□□ -0.14
Shroom2-201ENSMUST00000062317 Mrs2Q5NCE8 434 aa14.15□□□□□ -0.14
Shroom2-201ENSMUST00000062317 Fam71e1A1L3C1 212 aa14.14□□□□□ -0.15
Shroom2-201ENSMUST00000062317 Gm13697A2AK42 830 aa14.12□□□□□ -0.15
Shroom2-201ENSMUST00000062317 BlmO88700 1416 aa14.11□□□□□ -0.15
Shroom2-201ENSMUST00000062317 SafbD3YXK2 937 aaKnown RBP14.09□□□□□ -0.15
Shroom2-201ENSMUST00000062317 Plppr3Q7TPB0 716 aa14.08□□□□□ -0.16
Shroom2-201ENSMUST00000062317 Wdr43Q6ZQL4 677 aaKnown RBP14.05□□□□□ -0.16
Shroom2-201ENSMUST00000062317 Trim26Q99PN3 545 aa13.99□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 78 ms