RNA–Protein interactions for RNA: ENSMUST00000062010.9

Rtl3-201, Transcript of Retrotransposon Gag-like protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtl3, Length 2,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3-201ENSMUST00000062010 Rpgrip1Q9EPQ2 1331 aa15.57■□□□□ 0.08
Rtl3-201ENSMUST00000062010 NischQ80TM9 1593 aa15.07■□□□□ 0
Rtl3-201ENSMUST00000062010 Gm35339A0A140LHH9 1649 aa14.9□□□□□ -0.02
Rtl3-201ENSMUST00000062010 Pcgf6Q99NA9 353 aa14.87□□□□□ -0.03
Rtl3-201ENSMUST00000062010 Abcc9P70170 1546 aa14.75□□□□□ -0.05
Rtl3-201ENSMUST00000062010 Acin1Q9JIX8 1338 aaKnown RBP14.75□□□□□ -0.05
Rtl3-201ENSMUST00000062010 Rtl1Q7M732 1744 aa14.61□□□□□ -0.07
Rtl3-201ENSMUST00000062010 Myt1Q8CFC2 1127 aa14.55□□□□□ -0.08
Rtl3-201ENSMUST00000062010 Las1lA2BE28 776 aaKnown RBP14.43□□□□□ -0.1
Rtl3-201ENSMUST00000062010 Ccdc180J3QNE4 1664 aa14.37□□□□□ -0.11
Rtl3-201ENSMUST00000062010 CenpbP27790 599 aa14.32□□□□□ -0.12
Rtl3-201ENSMUST00000062010 DiexfQ8BTT6 772 aaKnown RBP14.31□□□□□ -0.12
Rtl3-201ENSMUST00000062010 Abcc8B2RUS7 1588 aa14.29□□□□□ -0.12
Rtl3-201ENSMUST00000062010 Neurod1Q60867 357 aa14.27□□□□□ -0.13
Rtl3-201ENSMUST00000062010 Trim41Q5NCC3 630 aa14.21□□□□□ -0.13
Rtl3-201ENSMUST00000062010 1700123L14RikQ3V2K7 440 aa14.11□□□□□ -0.15
Rtl3-201ENSMUST00000062010 Supt5hO55201 1082 aaKnown RBP14.08□□□□□ -0.16
Rtl3-201ENSMUST00000062010 Bcl11aQ9QYE3 773 aa14.01□□□□□ -0.17
Rtl3-201ENSMUST00000062010 Dcaf1Q80TR8 1506 aa14.01□□□□□ -0.17
Rtl3-201ENSMUST00000062010 Rhox8Q6VSS7 320 aa13.91□□□□□ -0.18
Rtl3-201ENSMUST00000062010 Zcchc6Q5BLK4 1491 aaKnown RBP13.86□□□□□ -0.19
Rtl3-201ENSMUST00000062010 Anks4bQ8K3X6 423 aa13.85□□□□□ -0.19
Rtl3-201ENSMUST00000062010 Aplp2Q06335 707 aa13.82□□□□□ -0.2
Rtl3-201ENSMUST00000062010 Ehmt2Q9Z148 1263 aaKnown RBP13.79□□□□□ -0.2
Rtl3-201ENSMUST00000062010 Csrnp3P59055 597 aa13.79□□□□□ -0.2
Rtl3-201ENSMUST00000062010 PrkcshO08795 521 aa13.61□□□□□ -0.23
Rtl3-201ENSMUST00000062010 Amer1Q7TS75 1132 aa13.61□□□□□ -0.23
Rtl3-201ENSMUST00000062010 Cngb1E1AZ71 1325 aa13.55□□□□□ -0.24
Rtl3-201ENSMUST00000062010 HrcG5E8J6 738 aa13.55□□□□□ -0.24
Rtl3-201ENSMUST00000062010 Sall2Q9QX96 1004 aa13.4□□□□□ -0.26
Rtl3-201ENSMUST00000062010 Zeb1Q64318 1117 aa13.3□□□□□ -0.28
Rtl3-201ENSMUST00000062010 NefmP08553 848 aa13.27□□□□□ -0.29
Rtl3-201ENSMUST00000062010 Ifnlr1Q8CGK5 535 aa13.26□□□□□ -0.29
Rtl3-201ENSMUST00000062010 Cdk11bP24788 784 aaKnown RBP13.25□□□□□ -0.29
Rtl3-201ENSMUST00000062010 Fam71e1A1L3C1 212 aa13.24□□□□□ -0.29
Rtl3-201ENSMUST00000062010 Rb1cc1Q9ESK9 1588 aa13.21□□□□□ -0.3
Rtl3-201ENSMUST00000062010 Gm38655A0A286YDK6 273 aa13.19□□□□□ -0.3
Rtl3-201ENSMUST00000062010 Baz1aO88379 1555 aa13.15□□□□□ -0.3
Rtl3-201ENSMUST00000062010 Nop58Q6DFW4 536 aaKnown RBP13.14□□□□□ -0.31
Rtl3-201ENSMUST00000062010 ScribQ80U72 1612 aa13.1□□□□□ -0.31
Rtl3-201ENSMUST00000062010 Rtl5Q5DTT4 599 aa13.09□□□□□ -0.31
Rtl3-201ENSMUST00000062010 Fgd1P52734 960 aa13.04□□□□□ -0.32
Rtl3-201ENSMUST00000062010 Hdac5Q9Z2V6 1113 aa13.02□□□□□ -0.32
Rtl3-201ENSMUST00000062010 Crybg2B7ZCC2 1516 aa13.02□□□□□ -0.33
Rtl3-201ENSMUST00000062010 Cep164Q5DU05 1446 aa13□□□□□ -0.33
Rtl3-201ENSMUST00000062010 NrdcQ8BHG1 1161 aa12.99□□□□□ -0.33
Rtl3-201ENSMUST00000062010 Pknox2Q8BG99 474 aa12.98□□□□□ -0.33
Rtl3-201ENSMUST00000062010 ClspnQ80YR7 1315 aa12.96□□□□□ -0.33
Rtl3-201ENSMUST00000062010 Kdm5dQ62240 1548 aa12.91□□□□□ -0.34
Rtl3-201ENSMUST00000062010 Tnnt3Q9QZ47 272 aa12.9□□□□□ -0.34
Rtl3-201ENSMUST00000062010 Smarca2Q6DIC0 1577 aa12.9□□□□□ -0.34
Rtl3-201ENSMUST00000062010 Mapk8ip2Q9ERE9 830 aa12.89□□□□□ -0.35
Rtl3-201ENSMUST00000062010 Mier1Q5UAK0 511 aa12.88□□□□□ -0.35
Rtl3-201ENSMUST00000062010 Aebp2Q9Z248 504 aaKnown RBP12.86□□□□□ -0.35
Rtl3-201ENSMUST00000062010 Anp32aO35381 247 aa12.85□□□□□ -0.35
Rtl3-201ENSMUST00000062010 Wdr66E9Q743 1299 aa12.85□□□□□ -0.35
Rtl3-201ENSMUST00000062010 SafbD3YXK2 937 aaKnown RBP12.84□□□□□ -0.35
Rtl3-201ENSMUST00000062010 Ccdc136Q3TVA9 1136 aa12.84□□□□□ -0.35
Rtl3-201ENSMUST00000062010 Pelp1Q9DBD5 1123 aaKnown RBP12.83□□□□□ -0.36
Rtl3-201ENSMUST00000062010 NacadQ5SWP3 1504 aa12.83□□□□□ -0.36
Rtl3-201ENSMUST00000062010 Hnrnpul2Q00PI9 745 aaKnown RBP12.8□□□□□ -0.36
Rtl3-201ENSMUST00000062010 Gtf3c3Q3TMP1 882 aa12.76□□□□□ -0.37
Rtl3-201ENSMUST00000062010 Ccdc9Q8VC31 543 aaKnown RBP12.71□□□□□ -0.38
Rtl3-201ENSMUST00000062010 CatipB9EKE5 520 aa12.7□□□□□ -0.38
Rtl3-201ENSMUST00000062010 Upf2A2AT37 1269 aaKnown RBP12.68□□□□□ -0.38
Rtl3-201ENSMUST00000062010 Plcd4Q8K3R3 807 aa12.67□□□□□ -0.38
Rtl3-201ENSMUST00000062010 Irx3P81067 507 aa12.62□□□□□ -0.39
Rtl3-201ENSMUST00000062010 Rsf1E9PWW9 1441 aaKnown RBP12.59□□□□□ -0.39
Rtl3-201ENSMUST00000062010 Ipo4Q8VI75 1082 aa12.59□□□□□ -0.39
Rtl3-201ENSMUST00000062010 Nolc1E9Q5C9 702 aaKnown RBP12.58□□□□□ -0.4
Rtl3-201ENSMUST00000062010 Il27Q8K3I6 234 aa12.57□□□□□ -0.4
Rtl3-201ENSMUST00000062010 Supt16hQ920B9 1047 aa12.56□□□□□ -0.4
Rtl3-201ENSMUST00000062010 Brd4Q9ESU6 1400 aaKnown RBP12.55□□□□□ -0.4
Rtl3-201ENSMUST00000062010 Ccdc27Q3V036 639 aa12.54□□□□□ -0.4
Rtl3-201ENSMUST00000062010 Sycp2Q9CUU3 1500 aa12.54□□□□□ -0.4
Rtl3-201ENSMUST00000062010 Golga3P55937 1487 aa12.52□□□□□ -0.41
Rtl3-201ENSMUST00000062010 Ppargc1bQ8VHJ7 1014 aa12.51□□□□□ -0.41
Rtl3-201ENSMUST00000062010 Ttbk1Q6PCN3 1308 aa12.47□□□□□ -0.41
Rtl3-201ENSMUST00000062010 Znf710Q3U288 666 aa12.45□□□□□ -0.42
Rtl3-201ENSMUST00000062010 Gtf3c5Q8R2T8 520 aa12.45□□□□□ -0.42
Rtl3-201ENSMUST00000062010 Chic1Q8CBW7 227 aa12.44□□□□□ -0.42
Rtl3-201ENSMUST00000062010 BccipQ9CWI3 316 aa12.44□□□□□ -0.42
Rtl3-201ENSMUST00000062010 Ccdc88bQ4QRL3 1481 aa12.43□□□□□ -0.42
Rtl3-201ENSMUST00000062010 TonslQ6NZL6 1363 aa12.43□□□□□ -0.42
Rtl3-201ENSMUST00000062010 Top2bQ64511 1612 aa12.42□□□□□ -0.42
Rtl3-201ENSMUST00000062010 Kcnn1Q9EQR3 537 aa12.4□□□□□ -0.42
Rtl3-201ENSMUST00000062010 Calr4Q3TQS0 420 aa12.4□□□□□ -0.42
Rtl3-201ENSMUST00000062010 Ap3b1Q9Z1T1 1105 aa12.38□□□□□ -0.43
Rtl3-201ENSMUST00000062010 Hsp90aa1P07901 733 aaKnown RBP12.37□□□□□ -0.43
Rtl3-201ENSMUST00000062010 Synj1Q8CHC4 1574 aa12.36□□□□□ -0.43
Rtl3-201ENSMUST00000062010 Stra8P70278 393 aa12.36□□□□□ -0.43
Rtl3-201ENSMUST00000062010 Plppr3Q7TPB0 716 aa12.34□□□□□ -0.43
Rtl3-201ENSMUST00000062010 Zfp777B9EKF4 885 aa12.34□□□□□ -0.43
Rtl3-201ENSMUST00000062010 Cecr2E9Q2Z1 1453 aa12.32□□□□□ -0.44
Rtl3-201ENSMUST00000062010 AampJ3QN89 436 aa12.31□□□□□ -0.44
Rtl3-201ENSMUST00000062010 Rapgef2Q8CHG7 1496 aa12.29□□□□□ -0.44
Rtl3-201ENSMUST00000062010 Washc2Q6PGL7 1334 aa12.29□□□□□ -0.44
Rtl3-201ENSMUST00000062010 CftrP26361 1476 aa12.28□□□□□ -0.44
Rtl3-201ENSMUST00000062010 Znf316Q6PGE4 1016 aa12.27□□□□□ -0.45
Rtl3-201ENSMUST00000062010 Myt1lP97500 1187 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 123 ms