RNA–Protein interactions for RNA: ENSMUST00000051558.9

Chd7-202, Transcript of Chromodomain-helicase-DNA-binding protein 7, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Chd7, Length 10,216 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7-202ENSMUST00000051558 Rhox8Q6VSS7 320 aa15.32■□□□□ 0.04
Chd7-202ENSMUST00000051558 Rtl1Q7M732 1744 aa15.29■□□□□ 0.04
Chd7-202ENSMUST00000051558 Rpgrip1Q9EPQ2 1331 aa15□□□□□ -0.01
Chd7-202ENSMUST00000051558 NischQ80TM9 1593 aa14.91□□□□□ -0.02
Chd7-202ENSMUST00000051558 Ccdc180J3QNE4 1664 aa14.69□□□□□ -0.06
Chd7-202ENSMUST00000051558 Cngb1E1AZ71 1325 aa14.18□□□□□ -0.14
Chd7-202ENSMUST00000051558 Gm35339A0A140LHH9 1649 aa14.12□□□□□ -0.15
Chd7-202ENSMUST00000051558 Abcc9P70170 1546 aa14.09□□□□□ -0.15
Chd7-202ENSMUST00000051558 Las1lA2BE28 776 aaKnown RBP14.01□□□□□ -0.17
Chd7-202ENSMUST00000051558 Trim41Q5NCC3 630 aa13.87□□□□□ -0.19
Chd7-202ENSMUST00000051558 Ccdc136Q3TVA9 1136 aa13.65□□□□□ -0.22
Chd7-202ENSMUST00000051558 Pelp1Q9DBD5 1123 aaKnown RBP13.65□□□□□ -0.23
Chd7-202ENSMUST00000051558 Esf1Q3V1V3 845 aaKnown RBP13.61□□□□□ -0.23
Chd7-202ENSMUST00000051558 Acin1Q9JIX8 1338 aaKnown RBP13.61□□□□□ -0.23
Chd7-202ENSMUST00000051558 Abcc8B2RUS7 1588 aa13.6□□□□□ -0.23
Chd7-202ENSMUST00000051558 HrcG5E8J6 738 aa13.57□□□□□ -0.24
Chd7-202ENSMUST00000051558 NefmP08553 848 aa13.51□□□□□ -0.25
Chd7-202ENSMUST00000051558 Ehmt2Q9Z148 1263 aaKnown RBP13.44□□□□□ -0.26
Chd7-202ENSMUST00000051558 Amer1Q7TS75 1132 aa13.41□□□□□ -0.26
Chd7-202ENSMUST00000051558 Stra8P70278 393 aa13.38□□□□□ -0.27
Chd7-202ENSMUST00000051558 Wdr66E9Q743 1299 aa13.36□□□□□ -0.27
Chd7-202ENSMUST00000051558 Npm2Q80W85 207 aa13.32□□□□□ -0.28
Chd7-202ENSMUST00000051558 Rb1cc1Q9ESK9 1588 aa13.28□□□□□ -0.28
Chd7-202ENSMUST00000051558 Zeb1Q64318 1117 aa13.27□□□□□ -0.28
Chd7-202ENSMUST00000051558 Zcchc6Q5BLK4 1491 aaKnown RBP13.21□□□□□ -0.29
Chd7-202ENSMUST00000051558 Gab3Q8BSM5 595 aa13.18□□□□□ -0.3
Chd7-202ENSMUST00000051558 Myt1Q8CFC2 1127 aa13.17□□□□□ -0.3
Chd7-202ENSMUST00000051558 CenpbP27790 599 aa13.16□□□□□ -0.3
Chd7-202ENSMUST00000051558 Ube2uB1AUC4 352 aa13.14□□□□□ -0.31
Chd7-202ENSMUST00000051558 Dcaf1Q80TR8 1506 aa13.07□□□□□ -0.32
Chd7-202ENSMUST00000051558 Myt1lP97500 1187 aa13.05□□□□□ -0.32
Chd7-202ENSMUST00000051558 4930567H17RikQ3V0K5 233 aa13.04□□□□□ -0.32
Chd7-202ENSMUST00000051558 Brd4Q9ESU6 1400 aaKnown RBP13□□□□□ -0.33
Chd7-202ENSMUST00000051558 Tnnt3Q9QZ47 272 aa12.98□□□□□ -0.33
Chd7-202ENSMUST00000051558 Baz1aO88379 1555 aa12.96□□□□□ -0.33
Chd7-202ENSMUST00000051558 UbtfP25976 765 aaKnown RBP12.92□□□□□ -0.34
Chd7-202ENSMUST00000051558 Cep164Q5DU05 1446 aa12.91□□□□□ -0.34
Chd7-202ENSMUST00000051558 Cdk11bP24788 784 aaKnown RBP12.88□□□□□ -0.35
Chd7-202ENSMUST00000051558 Pcgf6Q99NA9 353 aa12.87□□□□□ -0.35
Chd7-202ENSMUST00000051558 NacadQ5SWP3 1504 aa12.86□□□□□ -0.35
Chd7-202ENSMUST00000051558 Rtl5Q5DTT4 599 aa12.78□□□□□ -0.36
Chd7-202ENSMUST00000051558 Anp32bQ9EST5 272 aaKnown RBP12.77□□□□□ -0.37
Chd7-202ENSMUST00000051558 TonslQ6NZL6 1363 aa12.74□□□□□ -0.37
Chd7-202ENSMUST00000051558 Neurod1Q60867 357 aa12.72□□□□□ -0.37
Chd7-202ENSMUST00000051558 Nop58Q6DFW4 536 aaKnown RBP12.7□□□□□ -0.38
Chd7-202ENSMUST00000051558 Ttbk1Q6PCN3 1308 aa12.66□□□□□ -0.38
Chd7-202ENSMUST00000051558 NrdcQ8BHG1 1161 aa12.64□□□□□ -0.39
Chd7-202ENSMUST00000051558 NeflP08551 543 aa12.64□□□□□ -0.39
Chd7-202ENSMUST00000051558 ClspnQ80YR7 1315 aa12.62□□□□□ -0.39
Chd7-202ENSMUST00000051558 NclP09405 707 aaKnown RBP12.62□□□□□ -0.39
Chd7-202ENSMUST00000051558 Kdm5dQ62240 1548 aa12.58□□□□□ -0.4
Chd7-202ENSMUST00000051558 Il27Q8K3I6 234 aa12.57□□□□□ -0.4
Chd7-202ENSMUST00000051558 Crybg2B7ZCC2 1516 aa12.55□□□□□ -0.4
Chd7-202ENSMUST00000051558 Mier1Q5UAK0 511 aa12.54□□□□□ -0.4
Chd7-202ENSMUST00000051558 Hdac5Q9Z2V6 1113 aa12.54□□□□□ -0.4
Chd7-202ENSMUST00000051558 Fam50aQ9WV03 339 aaKnown RBP12.53□□□□□ -0.4
Chd7-202ENSMUST00000051558 Supt5hO55201 1082 aaKnown RBP12.5□□□□□ -0.41
Chd7-202ENSMUST00000051558 Ccer2J3QPU5 274 aa12.48□□□□□ -0.41
Chd7-202ENSMUST00000051558 Golga3P55937 1487 aa12.45□□□□□ -0.42
Chd7-202ENSMUST00000051558 Slc24a1Q91WD8 1130 aa12.43□□□□□ -0.42
Chd7-202ENSMUST00000051558 Cttnbp2B9EJA2 1648 aa12.4□□□□□ -0.43
Chd7-202ENSMUST00000051558 Npm1Q61937 292 aaKnown RBP12.39□□□□□ -0.43
Chd7-202ENSMUST00000051558 Clip1Q922J3 1391 aa12.39□□□□□ -0.43
Chd7-202ENSMUST00000051558 Smarca2Q6DIC0 1577 aa12.38□□□□□ -0.43
Chd7-202ENSMUST00000051558 Anp32aO35381 247 aa12.35□□□□□ -0.43
Chd7-202ENSMUST00000051558 Ap3b1Q9Z1T1 1105 aa12.34□□□□□ -0.43
Chd7-202ENSMUST00000051558 Ythdc1E9Q5K9 736 aaKnown RBP12.33□□□□□ -0.43
Chd7-202ENSMUST00000051558 Anks4bQ8K3X6 423 aa12.33□□□□□ -0.44
Chd7-202ENSMUST00000051558 Ccdc18Q640L5 1455 aa12.3□□□□□ -0.44
Chd7-202ENSMUST00000051558 Ercc6F8VPZ5 1481 aa12.28□□□□□ -0.44
Chd7-202ENSMUST00000051558 DiexfQ8BTT6 772 aaKnown RBP12.28□□□□□ -0.44
Chd7-202ENSMUST00000051558 ScribQ80U72 1612 aa12.27□□□□□ -0.45
Chd7-202ENSMUST00000051558 4933416C03RikQ3V063 378 aa12.25□□□□□ -0.45
Chd7-202ENSMUST00000051558 Aplp2Q06335 707 aa12.23□□□□□ -0.45
Chd7-202ENSMUST00000051558 Plekhg3Q4VAC9 1341 aa12.22□□□□□ -0.45
Chd7-202ENSMUST00000051558 Fmn1Q05860 1466 aa12.22□□□□□ -0.45
Chd7-202ENSMUST00000051558 Os9Q8K2C7 672 aa12.22□□□□□ -0.45
Chd7-202ENSMUST00000051558 Upf2A2AT37 1269 aaKnown RBP12.21□□□□□ -0.45
Chd7-202ENSMUST00000051558 Sycp2Q9CUU3 1500 aa12.21□□□□□ -0.45
Chd7-202ENSMUST00000051558 Eea1Q8BL66 1411 aa12.21□□□□□ -0.45
Chd7-202ENSMUST00000051558 Rsf1E9PWW9 1441 aaKnown RBP12.2□□□□□ -0.46
Chd7-202ENSMUST00000051558 Eif5bQ05D44 1216 aaKnown RBP12.18□□□□□ -0.46
Chd7-202ENSMUST00000051558 Smarca4Q3TKT4 1613 aaKnown RBP12.15□□□□□ -0.46
Chd7-202ENSMUST00000051558 Cc2d2aQ8CFW7 1633 aa12.14□□□□□ -0.47
Chd7-202ENSMUST00000051558 Chic1Q8CBW7 227 aa12.13□□□□□ -0.47
Chd7-202ENSMUST00000051558 Ccdc9Q8VC31 543 aaKnown RBP12.13□□□□□ -0.47
Chd7-202ENSMUST00000051558 Mia2Q91ZV0 1396 aa12.12□□□□□ -0.47
Chd7-202ENSMUST00000051558 BlmO88700 1416 aa12.11□□□□□ -0.47
Chd7-202ENSMUST00000051558 Polr1aO35134 1717 aaKnown RBP12.1□□□□□ -0.47
Chd7-202ENSMUST00000051558 Setd5Q5XJV7 1441 aa12.1□□□□□ -0.47
Chd7-202ENSMUST00000051558 Ubl4bQ9CQ84 188 aa12.09□□□□□ -0.47
Chd7-202ENSMUST00000051558 Synj1Q8CHC4 1574 aa12.07□□□□□ -0.48
Chd7-202ENSMUST00000051558 Clstn2Q9ER65 966 aa12.06□□□□□ -0.48
Chd7-202ENSMUST00000051558 Pds5bQ4VA53 1446 aaKnown RBP12.05□□□□□ -0.48
Chd7-202ENSMUST00000051558 Lmod2Q3UHZ5 550 aa12.03□□□□□ -0.48
Chd7-202ENSMUST00000051558 Sall2Q9QX96 1004 aa12.01□□□□□ -0.49
Chd7-202ENSMUST00000051558 Nlrp6Q91WS2 869 aa12□□□□□ -0.49
Chd7-202ENSMUST00000051558 Kif15Q6P9L6 1387 aa11.99□□□□□ -0.49
Chd7-202ENSMUST00000051558 Calr4Q3TQS0 420 aa11.98□□□□□ -0.49
Chd7-202ENSMUST00000051558 Gm13697A2AK42 830 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms