RNA–Protein interactions for RNA: ENSMUST00000049404.12

Clasp1-201, Transcript of CLIP-associating protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clasp1, Length 7,797 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clasp1-201ENSMUST00000049404 Rhox8Q6VSS7 320 aa13.6□□□□□ -0.23
Clasp1-201ENSMUST00000049404 Ube2uB1AUC4 352 aa12.37□□□□□ -0.43
Clasp1-201ENSMUST00000049404 Esf1Q3V1V3 845 aaKnown RBP12.32□□□□□ -0.44
Clasp1-201ENSMUST00000049404 Zeb1Q64318 1117 aa12.26□□□□□ -0.45
Clasp1-201ENSMUST00000049404 Cngb1E1AZ71 1325 aa12.19□□□□□ -0.46
Clasp1-201ENSMUST00000049404 Ehmt2Q9Z148 1263 aaKnown RBP12.1□□□□□ -0.47
Clasp1-201ENSMUST00000049404 Npm2Q80W85 207 aa12.01□□□□□ -0.49
Clasp1-201ENSMUST00000049404 Ccdc136Q3TVA9 1136 aa11.98□□□□□ -0.49
Clasp1-201ENSMUST00000049404 Wdr66E9Q743 1299 aa11.91□□□□□ -0.5
Clasp1-201ENSMUST00000049404 Myt1lP97500 1187 aa11.85□□□□□ -0.51
Clasp1-201ENSMUST00000049404 Las1lA2BE28 776 aaKnown RBP11.84□□□□□ -0.51
Clasp1-201ENSMUST00000049404 Gab3Q8BSM5 595 aa11.83□□□□□ -0.52
Clasp1-201ENSMUST00000049404 Rpgrip1Q9EPQ2 1331 aa11.82□□□□□ -0.52
Clasp1-201ENSMUST00000049404 Pelp1Q9DBD5 1123 aaKnown RBP11.75□□□□□ -0.53
Clasp1-201ENSMUST00000049404 Il27Q8K3I6 234 aa11.53□□□□□ -0.56
Clasp1-201ENSMUST00000049404 Trim41Q5NCC3 630 aa11.52□□□□□ -0.56
Clasp1-201ENSMUST00000049404 Slc24a1Q91WD8 1130 aa11.48□□□□□ -0.57
Clasp1-201ENSMUST00000049404 Os9Q8K2C7 672 aa11.45□□□□□ -0.58
Clasp1-201ENSMUST00000049404 Amer1Q7TS75 1132 aa11.39□□□□□ -0.59
Clasp1-201ENSMUST00000049404 Plppr3Q7TPB0 716 aa11.36□□□□□ -0.59
Clasp1-201ENSMUST00000049404 UbtfP25976 765 aaKnown RBP11.34□□□□□ -0.59
Clasp1-201ENSMUST00000049404 HrcG5E8J6 738 aa11.33□□□□□ -0.6
Clasp1-201ENSMUST00000049404 Gm13697A2AK42 830 aa11.32□□□□□ -0.6
Clasp1-201ENSMUST00000049404 Ifnlr1Q8CGK5 535 aa11.31□□□□□ -0.6
Clasp1-201ENSMUST00000049404 Ap3b1Q9Z1T1 1105 aa11.28□□□□□ -0.6
Clasp1-201ENSMUST00000049404 Neurod1Q60867 357 aa11.27□□□□□ -0.61
Clasp1-201ENSMUST00000049404 Chic1Q8CBW7 227 aa11.23□□□□□ -0.61
Clasp1-201ENSMUST00000049404 Zbtb7cQ8VCZ7 619 aa11.21□□□□□ -0.61
Clasp1-201ENSMUST00000049404 Gm35339A0A140LHH9 1649 aa11.21□□□□□ -0.61
Clasp1-201ENSMUST00000049404 Ttbk1Q6PCN3 1308 aa11.2□□□□□ -0.62
Clasp1-201ENSMUST00000049404 Fam50aQ9WV03 339 aaKnown RBP11.14□□□□□ -0.63
Clasp1-201ENSMUST00000049404 Atp1b4Q99ME6 356 aa11.12□□□□□ -0.63
Clasp1-201ENSMUST00000049404 NischQ80TM9 1593 aa11.09□□□□□ -0.63
Clasp1-201ENSMUST00000049404 Anp32bQ9EST5 272 aaKnown RBP11.08□□□□□ -0.64
Clasp1-201ENSMUST00000049404 Stra8P70278 393 aa11.08□□□□□ -0.64
Clasp1-201ENSMUST00000049404 Gm13695A2AK44 830 aa11.07□□□□□ -0.64
Clasp1-201ENSMUST00000049404 Abcc9P70170 1546 aa11.06□□□□□ -0.64
Clasp1-201ENSMUST00000049404 Hnrnpul2Q00PI9 745 aaKnown RBP11.05□□□□□ -0.64
Clasp1-201ENSMUST00000049404 DiexfQ8BTT6 772 aaKnown RBP11.03□□□□□ -0.64
Clasp1-201ENSMUST00000049404 4930567H17RikQ3V0K5 233 aa11.02□□□□□ -0.65
Clasp1-201ENSMUST00000049404 NclP09405 707 aaKnown RBP11□□□□□ -0.65
Clasp1-201ENSMUST00000049404 NrdcQ8BHG1 1161 aa11□□□□□ -0.65
Clasp1-201ENSMUST00000049404 Eif5bQ05D44 1216 aaKnown RBP10.98□□□□□ -0.65
Clasp1-201ENSMUST00000049404 NeflP08551 543 aa10.98□□□□□ -0.65
Clasp1-201ENSMUST00000049404 Erich6D3Z6S9 713 aa10.97□□□□□ -0.65
Clasp1-201ENSMUST00000049404 Npm1Q61937 292 aaKnown RBP10.9□□□□□ -0.66
Clasp1-201ENSMUST00000049404 Prdm10Q3UTQ7 1184 aa10.89□□□□□ -0.67
Clasp1-201ENSMUST00000049404 Zbtb4Q5F293 982 aa10.89□□□□□ -0.67
Clasp1-201ENSMUST00000049404 Safb2Q80YR5 991 aaKnown RBP10.88□□□□□ -0.67
Clasp1-201ENSMUST00000049404 Fkbp15Q6P9Q6 1216 aaKnown RBP10.86□□□□□ -0.67
Clasp1-201ENSMUST00000049404 Zcchc6Q5BLK4 1491 aaKnown RBP10.86□□□□□ -0.67
Clasp1-201ENSMUST00000049404 4933416C03RikQ3V063 378 aa10.86□□□□□ -0.67
Clasp1-201ENSMUST00000049404 Acin1Q9JIX8 1338 aaKnown RBP10.8□□□□□ -0.68
Clasp1-201ENSMUST00000049404 NefmP08553 848 aa10.79□□□□□ -0.68
Clasp1-201ENSMUST00000049404 CenpbP27790 599 aa10.79□□□□□ -0.68
Clasp1-201ENSMUST00000049404 Rtl1Q7M732 1744 aa10.79□□□□□ -0.68
Clasp1-201ENSMUST00000049404 Nlrp6Q91WS2 869 aa10.77□□□□□ -0.69
Clasp1-201ENSMUST00000049404 Lmod2Q3UHZ5 550 aa10.76□□□□□ -0.69
Clasp1-201ENSMUST00000049404 Polr3glQ8R0C0 218 aa10.76□□□□□ -0.69
Clasp1-201ENSMUST00000049404 Cdk11bP24788 784 aaKnown RBP10.73□□□□□ -0.69
Clasp1-201ENSMUST00000049404 Ppargc1bQ8VHJ7 1014 aa10.73□□□□□ -0.69
Clasp1-201ENSMUST00000049404 Ccdc180J3QNE4 1664 aa10.71□□□□□ -0.69
Clasp1-201ENSMUST00000049404 Myt1Q8CFC2 1127 aa10.7□□□□□ -0.7
Clasp1-201ENSMUST00000049404 Rangap1P46061 589 aaKnown RBP10.66□□□□□ -0.7
Clasp1-201ENSMUST00000049404 P3h3Q8CG70 732 aa10.66□□□□□ -0.7
Clasp1-201ENSMUST00000049404 Hdac5Q9Z2V6 1113 aa10.63□□□□□ -0.71
Clasp1-201ENSMUST00000049404 MyclP10166 368 aa10.62□□□□□ -0.71
Clasp1-201ENSMUST00000049404 Ubl4bQ9CQ84 188 aa10.53□□□□□ -0.72
Clasp1-201ENSMUST00000049404 ArxO35085 564 aa10.53□□□□□ -0.72
Clasp1-201ENSMUST00000049404 TonslQ6NZL6 1363 aa10.52□□□□□ -0.73
Clasp1-201ENSMUST00000049404 Irx6Q9ER75 438 aa10.51□□□□□ -0.73
Clasp1-201ENSMUST00000049404 Plekhg3Q4VAC9 1341 aa10.5□□□□□ -0.73
Clasp1-201ENSMUST00000049404 Znf326O88291 580 aa10.49□□□□□ -0.73
Clasp1-201ENSMUST00000049404 Tnnt3Q9QZ47 272 aa10.44□□□□□ -0.74
Clasp1-201ENSMUST00000049404 Ythdc1E9Q5K9 736 aaKnown RBP10.43□□□□□ -0.74
Clasp1-201ENSMUST00000049404 Hsp90aa1P07901 733 aaKnown RBP10.43□□□□□ -0.74
Clasp1-201ENSMUST00000049404 Nop58Q6DFW4 536 aaKnown RBP10.42□□□□□ -0.74
Clasp1-201ENSMUST00000049404 Ggt6Q6PDE7 497 aa10.41□□□□□ -0.74
Clasp1-201ENSMUST00000049404 Pcgf6Q99NA9 353 aa10.39□□□□□ -0.75
Clasp1-201ENSMUST00000049404 Rtn4Q99P72 1162 aaKnown RBP10.39□□□□□ -0.75
Clasp1-201ENSMUST00000049404 Clstn1Q9EPL2 979 aa10.37□□□□□ -0.75
Clasp1-201ENSMUST00000049404 NgefQ8CHT1 710 aa10.37□□□□□ -0.75
Clasp1-201ENSMUST00000049404 CatipB9EKE5 520 aa10.34□□□□□ -0.75
Clasp1-201ENSMUST00000049404 Mapk8ip2Q9ERE9 830 aa10.34□□□□□ -0.75
Clasp1-201ENSMUST00000049404 Fgd1P52734 960 aa10.34□□□□□ -0.75
Clasp1-201ENSMUST00000049404 Ppp1r18Q8BQ30 594 aa10.3□□□□□ -0.76
Clasp1-201ENSMUST00000049404 Q8BT18 775 aa10.3□□□□□ -0.76
Clasp1-201ENSMUST00000049404 Trim26Q99PN3 545 aa10.29□□□□□ -0.76
Clasp1-201ENSMUST00000049404 Csrnp3P59055 597 aa10.29□□□□□ -0.76
Clasp1-201ENSMUST00000049404 Ubap1lG3UW59 384 aa10.28□□□□□ -0.76
Clasp1-201ENSMUST00000049404 DaxxO35613 739 aa10.27□□□□□ -0.77
Clasp1-201ENSMUST00000049404 MlecQ6ZQI3 291 aaKnown RBP10.27□□□□□ -0.77
Clasp1-201ENSMUST00000049404 Aplp2Q06335 707 aa10.26□□□□□ -0.77
Clasp1-201ENSMUST00000049404 Chic2Q9D9G3 165 aa10.25□□□□□ -0.77
Clasp1-201ENSMUST00000049404 Rad21Q61550 635 aaKnown RBP10.24□□□□□ -0.77
Clasp1-201ENSMUST00000049404 Mier1Q5UAK0 511 aa10.24□□□□□ -0.77
Clasp1-201ENSMUST00000049404 Rtl5Q5DTT4 599 aa10.23□□□□□ -0.77
Clasp1-201ENSMUST00000049404 Ppm1fQ8CGA0 452 aa10.23□□□□□ -0.77
Clasp1-201ENSMUST00000049404 Vsig10D3YX43 558 aa10.22□□□□□ -0.77
Clasp1-201ENSMUST00000049404 Ecm2Q5FW85 670 aa10.21□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms