RNA–Protein interactions for RNA: ENSMUST00000049348.8

Traip-201, Transcript of E3 ubiquitin-protein ligase TRAIP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traip, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traip-201ENSMUST00000049348 Gm35339A0A140LHH9 1649 aa19.8■□□□□ 0.76
Traip-201ENSMUST00000049348 NischQ80TM9 1593 aa19.28■□□□□ 0.68
Traip-201ENSMUST00000049348 Abcc9P70170 1546 aa18.77■□□□□ 0.6
Traip-201ENSMUST00000049348 Abcc8B2RUS7 1588 aa18.65■□□□□ 0.58
Traip-201ENSMUST00000049348 Rhox8Q6VSS7 320 aa18.3■□□□□ 0.52
Traip-201ENSMUST00000049348 ScribQ80U72 1612 aa17.84■□□□□ 0.45
Traip-201ENSMUST00000049348 Rtl1Q7M732 1744 aa17.56■□□□□ 0.4
Traip-201ENSMUST00000049348 Ccdc180J3QNE4 1664 aa17.52■□□□□ 0.4
Traip-201ENSMUST00000049348 Dcaf1Q80TR8 1506 aa17.49■□□□□ 0.39
Traip-201ENSMUST00000049348 Ehmt2Q9Z148 1263 aaKnown RBP17.47■□□□□ 0.39
Traip-201ENSMUST00000049348 NacadQ5SWP3 1504 aa17.43■□□□□ 0.38
Traip-201ENSMUST00000049348 Rpgrip1Q9EPQ2 1331 aa17.39■□□□□ 0.37
Traip-201ENSMUST00000049348 Kdm5dQ62240 1548 aa17.28■□□□□ 0.36
Traip-201ENSMUST00000049348 Acin1Q9JIX8 1338 aaKnown RBP17.22■□□□□ 0.35
Traip-201ENSMUST00000049348 Zcchc6Q5BLK4 1491 aaKnown RBP17.18■□□□□ 0.34
Traip-201ENSMUST00000049348 Sycp2Q9CUU3 1500 aa17.04■□□□□ 0.32
Traip-201ENSMUST00000049348 Ccdc136Q3TVA9 1136 aa17.01■□□□□ 0.31
Traip-201ENSMUST00000049348 Pcgf6Q99NA9 353 aa16.9■□□□□ 0.3
Traip-201ENSMUST00000049348 HrcG5E8J6 738 aa16.83■□□□□ 0.28
Traip-201ENSMUST00000049348 Crybg2B7ZCC2 1516 aa16.82■□□□□ 0.28
Traip-201ENSMUST00000049348 Rb1cc1Q9ESK9 1588 aa16.8■□□□□ 0.28
Traip-201ENSMUST00000049348 BicraF8VPZ9 1578 aa16.69■□□□□ 0.26
Traip-201ENSMUST00000049348 Baz1aO88379 1555 aa16.67■□□□□ 0.26
Traip-201ENSMUST00000049348 Trim41Q5NCC3 630 aa16.65■□□□□ 0.26
Traip-201ENSMUST00000049348 Supt5hO55201 1082 aaKnown RBP16.6■□□□□ 0.25
Traip-201ENSMUST00000049348 Pds5bQ4VA53 1446 aaKnown RBP16.33■□□□□ 0.2
Traip-201ENSMUST00000049348 Neurod1Q60867 357 aa16.32■□□□□ 0.2
Traip-201ENSMUST00000049348 Zeb1Q64318 1117 aa16.31■□□□□ 0.2
Traip-201ENSMUST00000049348 Gab3Q8BSM5 595 aa16.29■□□□□ 0.2
Traip-201ENSMUST00000049348 Smarca2Q6DIC0 1577 aa16.19■□□□□ 0.18
Traip-201ENSMUST00000049348 Chic1Q8CBW7 227 aa16.19■□□□□ 0.18
Traip-201ENSMUST00000049348 Cep164Q5DU05 1446 aa16.19■□□□□ 0.18
Traip-201ENSMUST00000049348 Atad2bE9Q166 1460 aaKnown RBP16.18■□□□□ 0.18
Traip-201ENSMUST00000049348 Cngb1E1AZ71 1325 aa16.15■□□□□ 0.18
Traip-201ENSMUST00000049348 Thoc2B1AZI6 1594 aaKnown RBP16.15■□□□□ 0.18
Traip-201ENSMUST00000049348 Smarca4Q3TKT4 1613 aaKnown RBP16.09■□□□□ 0.17
Traip-201ENSMUST00000049348 Baz1bQ9Z277 1479 aa16.08■□□□□ 0.16
Traip-201ENSMUST00000049348 Mier1Q5UAK0 511 aa16.08■□□□□ 0.16
Traip-201ENSMUST00000049348 Sall2Q9QX96 1004 aa16.04■□□□□ 0.16
Traip-201ENSMUST00000049348 Rsf1E9PWW9 1441 aaKnown RBP16.03■□□□□ 0.16
Traip-201ENSMUST00000049348 Ercc6F8VPZ5 1481 aa15.94■□□□□ 0.14
Traip-201ENSMUST00000049348 Iqgap2Q3UQ44 1575 aa15.93■□□□□ 0.14
Traip-201ENSMUST00000049348 NefmP08553 848 aa15.9■□□□□ 0.14
Traip-201ENSMUST00000049348 Ccdc88bQ4QRL3 1481 aa15.88■□□□□ 0.13
Traip-201ENSMUST00000049348 Ppargc1bQ8VHJ7 1014 aa15.87■□□□□ 0.13
Traip-201ENSMUST00000049348 Fam135aQ6NS59 1506 aa15.85■□□□□ 0.13
Traip-201ENSMUST00000049348 Csrnp3P59055 597 aa15.82■□□□□ 0.12
Traip-201ENSMUST00000049348 Wdr62Q3U3T8 1523 aa15.82■□□□□ 0.12
Traip-201ENSMUST00000049348 Cecr2E9Q2Z1 1453 aa15.81■□□□□ 0.12
Traip-201ENSMUST00000049348 UbtfP25976 765 aaKnown RBP15.79■□□□□ 0.12
Traip-201ENSMUST00000049348 Aebp2Q9Z248 504 aaKnown RBP15.79■□□□□ 0.12
Traip-201ENSMUST00000049348 Wdr66E9Q743 1299 aa15.78■□□□□ 0.12
Traip-201ENSMUST00000049348 1700123L14RikQ3V2K7 440 aa15.78■□□□□ 0.12
Traip-201ENSMUST00000049348 Cttnbp2B9EJA2 1648 aa15.77■□□□□ 0.11
Traip-201ENSMUST00000049348 Cc2d2aQ8CFW7 1633 aa15.74■□□□□ 0.11
Traip-201ENSMUST00000049348 Brd4Q9ESU6 1400 aaKnown RBP15.72■□□□□ 0.11
Traip-201ENSMUST00000049348 Las1lA2BE28 776 aaKnown RBP15.72■□□□□ 0.11
Traip-201ENSMUST00000049348 Frmpd1A2AKB4 1549 aa15.69■□□□□ 0.1
Traip-201ENSMUST00000049348 Anks4bQ8K3X6 423 aa15.69■□□□□ 0.1
Traip-201ENSMUST00000049348 Esf1Q3V1V3 845 aaKnown RBP15.68■□□□□ 0.1
Traip-201ENSMUST00000049348 Phldb1Q6PDH0 1371 aaKnown RBP15.65■□□□□ 0.1
Traip-201ENSMUST00000049348 CftrP26361 1476 aa15.64■□□□□ 0.09
Traip-201ENSMUST00000049348 Golga3P55937 1487 aa15.64■□□□□ 0.09
Traip-201ENSMUST00000049348 Gm38655A0A286YDK6 273 aa15.61■□□□□ 0.09
Traip-201ENSMUST00000049348 Dnajc5bQ9CQ94 199 aa15.58■□□□□ 0.08
Traip-201ENSMUST00000049348 Synj1Q8CHC4 1574 aa15.57■□□□□ 0.08
Traip-201ENSMUST00000049348 Myt1lP97500 1187 aa15.56■□□□□ 0.08
Traip-201ENSMUST00000049348 Unc13aQ4KUS2 1712 aa15.55■□□□□ 0.08
Traip-201ENSMUST00000049348 Nop58Q6DFW4 536 aaKnown RBP15.54■□□□□ 0.08
Traip-201ENSMUST00000049348 Cdk11bP24788 784 aaKnown RBP15.53■□□□□ 0.08
Traip-201ENSMUST00000049348 ClspnQ80YR7 1315 aa15.46■□□□□ 0.06
Traip-201ENSMUST00000049348 Plekhg3Q4VAC9 1341 aa15.38■□□□□ 0.05
Traip-201ENSMUST00000049348 TonslQ6NZL6 1363 aa15.37■□□□□ 0.05
Traip-201ENSMUST00000049348 Mrc2Q64449 1479 aa15.36■□□□□ 0.05
Traip-201ENSMUST00000049348 Aplp2Q06335 707 aa15.32■□□□□ 0.04
Traip-201ENSMUST00000049348 Npm2Q80W85 207 aa15.3■□□□□ 0.04
Traip-201ENSMUST00000049348 Rapgef2Q8CHG7 1496 aa15.29■□□□□ 0.04
Traip-201ENSMUST00000049348 Lamc3Q9R0B6 1581 aa15.29■□□□□ 0.04
Traip-201ENSMUST00000049348 Top2bQ64511 1612 aa15.28■□□□□ 0.04
Traip-201ENSMUST00000049348 Eid3Q3V124 375 aa15.26■□□□□ 0.03
Traip-201ENSMUST00000049348 Cep162Q6ZQ06 1403 aa15.24■□□□□ 0.03
Traip-201ENSMUST00000049348 Ubl4bQ9CQ84 188 aa15.24■□□□□ 0.03
Traip-201ENSMUST00000049348 CenpbP27790 599 aa15.23■□□□□ 0.03
Traip-201ENSMUST00000049348 Mapk8ip2Q9ERE9 830 aa15.22■□□□□ 0.03
Traip-201ENSMUST00000049348 TnnQ80Z71 1560 aa15.2■□□□□ 0.02
Traip-201ENSMUST00000049348 SafbD3YXK2 937 aaKnown RBP15.19■□□□□ 0.02
Traip-201ENSMUST00000049348 Clip1Q922J3 1391 aa15.19■□□□□ 0.02
Traip-201ENSMUST00000049348 Ap3b1Q9Z1T1 1105 aa15.18■□□□□ 0.02
Traip-201ENSMUST00000049348 Hnrnpul2Q00PI9 745 aaKnown RBP15.16■□□□□ 0.02
Traip-201ENSMUST00000049348 Top2aQ01320 1528 aaKnown RBP15.09■□□□□ 0.01
Traip-201ENSMUST00000049348 Fmn1Q05860 1466 aa15.08■□□□□ 0
Traip-201ENSMUST00000049348 Ncapd3Q6ZQK0 1506 aa15.07■□□□□ 0
Traip-201ENSMUST00000049348 Kif15Q6P9L6 1387 aa15.06■□□□□ 0
Traip-201ENSMUST00000049348 Cux2P70298 1426 aa15.05■□□□□ 0
Traip-201ENSMUST00000049348 Fam71e1A1L3C1 212 aa15.05■□□□□ -0
Traip-201ENSMUST00000049348 Ccdc18Q640L5 1455 aa14.98□□□□□ -0.01
Traip-201ENSMUST00000049348 Lrriq1Q0P5X1 1673 aa14.98□□□□□ -0.01
Traip-201ENSMUST00000049348 Kif21aQ9QXL2 1672 aa14.98□□□□□ -0.01
Traip-201ENSMUST00000049348 Il27Q8K3I6 234 aa14.97□□□□□ -0.01
Traip-201ENSMUST00000049348 Camsap1A2AHC3 1581 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms