RNA–Protein interactions for RNA: ENSMUST00000047615.14

Smarcal1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarcal1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1-201ENSMUST00000047615 Gm35339A0A140LHH9 1649 aa17.13■□□□□ 0.33
Smarcal1-201ENSMUST00000047615 NischQ80TM9 1593 aa16.04■□□□□ 0.16
Smarcal1-201ENSMUST00000047615 Abcc9P70170 1546 aa15.8■□□□□ 0.12
Smarcal1-201ENSMUST00000047615 Abcc8B2RUS7 1588 aa15.71■□□□□ 0.1
Smarcal1-201ENSMUST00000047615 ScribQ80U72 1612 aa15.13■□□□□ 0.01
Smarcal1-201ENSMUST00000047615 Dcaf1Q80TR8 1506 aa14.99□□□□□ -0.01
Smarcal1-201ENSMUST00000047615 Ccdc180J3QNE4 1664 aa14.81□□□□□ -0.04
Smarcal1-201ENSMUST00000047615 NacadQ5SWP3 1504 aa14.69□□□□□ -0.06
Smarcal1-201ENSMUST00000047615 Kdm5dQ62240 1548 aa14.49□□□□□ -0.09
Smarcal1-201ENSMUST00000047615 Sycp2Q9CUU3 1500 aa14.4□□□□□ -0.1
Smarcal1-201ENSMUST00000047615 Crybg2B7ZCC2 1516 aa14.38□□□□□ -0.11
Smarcal1-201ENSMUST00000047615 Rhox8Q6VSS7 320 aa14.15□□□□□ -0.14
Smarcal1-201ENSMUST00000047615 BicraF8VPZ9 1578 aa14.14□□□□□ -0.15
Smarcal1-201ENSMUST00000047615 Baz1bQ9Z277 1479 aa14.06□□□□□ -0.16
Smarcal1-201ENSMUST00000047615 Baz1aO88379 1555 aa13.96□□□□□ -0.18
Smarcal1-201ENSMUST00000047615 Rb1cc1Q9ESK9 1588 aa13.95□□□□□ -0.18
Smarcal1-201ENSMUST00000047615 Thoc2B1AZI6 1594 aaKnown RBP13.86□□□□□ -0.19
Smarcal1-201ENSMUST00000047615 Smarca2Q6DIC0 1577 aa13.81□□□□□ -0.2
Smarcal1-201ENSMUST00000047615 Pds5bQ4VA53 1446 aaKnown RBP13.72□□□□□ -0.21
Smarcal1-201ENSMUST00000047615 Rtl1Q7M732 1744 aa13.67□□□□□ -0.22
Smarcal1-201ENSMUST00000047615 Atad2bE9Q166 1460 aaKnown RBP13.61□□□□□ -0.23
Smarcal1-201ENSMUST00000047615 Fam135aQ6NS59 1506 aa13.55□□□□□ -0.24
Smarcal1-201ENSMUST00000047615 Smarca4Q3TKT4 1613 aaKnown RBP13.52□□□□□ -0.24
Smarcal1-201ENSMUST00000047615 Wdr62Q3U3T8 1523 aa13.36□□□□□ -0.27
Smarcal1-201ENSMUST00000047615 Iqgap2Q3UQ44 1575 aa13.35□□□□□ -0.27
Smarcal1-201ENSMUST00000047615 Ercc6F8VPZ5 1481 aa13.26□□□□□ -0.29
Smarcal1-201ENSMUST00000047615 Unc13aQ4KUS2 1712 aa13.25□□□□□ -0.29
Smarcal1-201ENSMUST00000047615 Zcchc6Q5BLK4 1491 aaKnown RBP13.25□□□□□ -0.29
Smarcal1-201ENSMUST00000047615 Cttnbp2B9EJA2 1648 aa13.24□□□□□ -0.29
Smarcal1-201ENSMUST00000047615 Cc2d2aQ8CFW7 1633 aa13.22□□□□□ -0.29
Smarcal1-201ENSMUST00000047615 Frmpd1A2AKB4 1549 aa13.15□□□□□ -0.3
Smarcal1-201ENSMUST00000047615 Ccdc136Q3TVA9 1136 aa13.14□□□□□ -0.31
Smarcal1-201ENSMUST00000047615 Phldb1Q6PDH0 1371 aaKnown RBP13.05□□□□□ -0.32
Smarcal1-201ENSMUST00000047615 Cecr2E9Q2Z1 1453 aa13.03□□□□□ -0.32
Smarcal1-201ENSMUST00000047615 Rpgrip1Q9EPQ2 1331 aa12.98□□□□□ -0.33
Smarcal1-201ENSMUST00000047615 CftrP26361 1476 aa12.98□□□□□ -0.33
Smarcal1-201ENSMUST00000047615 HrcG5E8J6 738 aa12.97□□□□□ -0.33
Smarcal1-201ENSMUST00000047615 Ehmt2Q9Z148 1263 aaKnown RBP12.97□□□□□ -0.33
Smarcal1-201ENSMUST00000047615 Gpatch8A2A6A1 1505 aa12.95□□□□□ -0.34
Smarcal1-201ENSMUST00000047615 Brd4Q9ESU6 1400 aaKnown RBP12.93□□□□□ -0.34
Smarcal1-201ENSMUST00000047615 TnnQ80Z71 1560 aa12.91□□□□□ -0.34
Smarcal1-201ENSMUST00000047615 Lamc3Q9R0B6 1581 aa12.9□□□□□ -0.34
Smarcal1-201ENSMUST00000047615 Synj1Q8CHC4 1574 aa12.9□□□□□ -0.34
Smarcal1-201ENSMUST00000047615 Mrc2Q64449 1479 aa12.86□□□□□ -0.35
Smarcal1-201ENSMUST00000047615 Acin1Q9JIX8 1338 aaKnown RBP12.84□□□□□ -0.35
Smarcal1-201ENSMUST00000047615 Trim41Q5NCC3 630 aa12.81□□□□□ -0.36
Smarcal1-201ENSMUST00000047615 Top2bQ64511 1612 aa12.8□□□□□ -0.36
Smarcal1-201ENSMUST00000047615 Dnajc5bQ9CQ94 199 aa12.79□□□□□ -0.36
Smarcal1-201ENSMUST00000047615 Eif4g3Q80XI3 1579 aaKnown RBP12.7□□□□□ -0.38
Smarcal1-201ENSMUST00000047615 Pbrm1Q8BSQ9 1634 aaKnown RBP12.66□□□□□ -0.38
Smarcal1-201ENSMUST00000047615 Lrriq1Q0P5X1 1673 aa12.65□□□□□ -0.38
Smarcal1-201ENSMUST00000047615 Rsf1E9PWW9 1441 aaKnown RBP12.6□□□□□ -0.39
Smarcal1-201ENSMUST00000047615 Kif21aQ9QXL2 1672 aa12.56□□□□□ -0.4
Smarcal1-201ENSMUST00000047615 Shroom2A2ALU4 1481 aa12.55□□□□□ -0.4
Smarcal1-201ENSMUST00000047615 Cngb1E1AZ71 1325 aa12.53□□□□□ -0.4
Smarcal1-201ENSMUST00000047615 Cep164Q5DU05 1446 aa12.52□□□□□ -0.4
Smarcal1-201ENSMUST00000047615 Camsap1A2AHC3 1581 aa12.48□□□□□ -0.41
Smarcal1-201ENSMUST00000047615 Gab3Q8BSM5 595 aa12.47□□□□□ -0.41
Smarcal1-201ENSMUST00000047615 Chic1Q8CBW7 227 aa12.47□□□□□ -0.41
Smarcal1-201ENSMUST00000047615 Fmn1Q05860 1466 aa12.43□□□□□ -0.42
Smarcal1-201ENSMUST00000047615 Golga3P55937 1487 aa12.42□□□□□ -0.42
Smarcal1-201ENSMUST00000047615 Zcchc11B2RX14 1644 aaKnown RBP12.41□□□□□ -0.42
Smarcal1-201ENSMUST00000047615 Pcgf6Q99NA9 353 aa12.41□□□□□ -0.42
Smarcal1-201ENSMUST00000047615 Crocc2F6XLV1 1638 aa12.36□□□□□ -0.43
Smarcal1-201ENSMUST00000047615 Ift140E9PY46 1464 aa12.36□□□□□ -0.43
Smarcal1-201ENSMUST00000047615 Rusc2Q80U22 1514 aa12.36□□□□□ -0.43
Smarcal1-201ENSMUST00000047615 Cux2P70298 1426 aa12.35□□□□□ -0.43
Smarcal1-201ENSMUST00000047615 Ubl4bQ9CQ84 188 aa12.32□□□□□ -0.44
Smarcal1-201ENSMUST00000047615 Ccdc88bQ4QRL3 1481 aa12.31□□□□□ -0.44
Smarcal1-201ENSMUST00000047615 Ccdc18Q640L5 1455 aa12.31□□□□□ -0.44
Smarcal1-201ENSMUST00000047615 Esf1Q3V1V3 845 aaKnown RBP12.3□□□□□ -0.44
Smarcal1-201ENSMUST00000047615 Urb2E9Q7L1 1524 aaKnown RBP12.28□□□□□ -0.44
Smarcal1-201ENSMUST00000047615 PogzQ8BZH4 1409 aaKnown RBP12.28□□□□□ -0.44
Smarcal1-201ENSMUST00000047615 NrkQ9R0G8 1455 aa12.27□□□□□ -0.45
Smarcal1-201ENSMUST00000047615 Top2aQ01320 1528 aaKnown RBP12.24□□□□□ -0.45
Smarcal1-201ENSMUST00000047615 Nup160Q9Z0W3 1402 aaKnown RBP12.24□□□□□ -0.45
Smarcal1-201ENSMUST00000047615 Kif15Q6P9L6 1387 aa12.23□□□□□ -0.45
Smarcal1-201ENSMUST00000047615 Supt5hO55201 1082 aaKnown RBP12.23□□□□□ -0.45
Smarcal1-201ENSMUST00000047615 Setd1bQ8CFT2 1985 aa12.23□□□□□ -0.45
Smarcal1-201ENSMUST00000047615 Grin2bQ01097 1482 aa12.22□□□□□ -0.45
Smarcal1-201ENSMUST00000047615 Efcab5A0JP43 1406 aa12.21□□□□□ -0.45
Smarcal1-201ENSMUST00000047615 EprsQ8CGC7 1512 aaKnown RBP12.21□□□□□ -0.46
Smarcal1-201ENSMUST00000047615 LrpprcQ6PB66 1392 aaKnown RBP12.19□□□□□ -0.46
Smarcal1-201ENSMUST00000047615 Cc2d2bA0A286YDU8 1405 aa12.16□□□□□ -0.46
Smarcal1-201ENSMUST00000047615 Mier1Q5UAK0 511 aa12.15□□□□□ -0.46
Smarcal1-201ENSMUST00000047615 Zeb1Q64318 1117 aa12.14□□□□□ -0.47
Smarcal1-201ENSMUST00000047615 Adamts12Q811B3 1600 aa12.13□□□□□ -0.47
Smarcal1-201ENSMUST00000047615 Dhx29Q6PGC1 1365 aaKnown RBP12.11□□□□□ -0.47
Smarcal1-201ENSMUST00000047615 Col17a1Q07563 1470 aa12.11□□□□□ -0.47
Smarcal1-201ENSMUST00000047615 Disp1Q3TDN0 1521 aa12.1□□□□□ -0.47
Smarcal1-201ENSMUST00000047615 Duox2A2AQ99 1517 aa12.1□□□□□ -0.47
Smarcal1-201ENSMUST00000047615 AqrQ8CFQ3 1481 aaKnown RBP12.09□□□□□ -0.47
Smarcal1-201ENSMUST00000047615 Plb1Q3TTY0 1478 aa12.09□□□□□ -0.47
Smarcal1-201ENSMUST00000047615 Samd9lQ69Z37 1561 aa12.08□□□□□ -0.48
Smarcal1-201ENSMUST00000047615 NefmP08553 848 aa12.07□□□□□ -0.48
Smarcal1-201ENSMUST00000047615 Eif4g1Q6NZJ6 1600 aaKnown RBP12.06□□□□□ -0.48
Smarcal1-201ENSMUST00000047615 Shroom4Q1W617 1475 aa12.05□□□□□ -0.48
Smarcal1-201ENSMUST00000047615 Map3k4O08648 1597 aa12.04□□□□□ -0.48
Smarcal1-201ENSMUST00000047615 Magi3Q9EQJ9 1476 aa12.04□□□□□ -0.48
Smarcal1-201ENSMUST00000047615 SynmQ70IV5 1561 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 125.9 ms