RNA–Protein interactions for RNA: ENSMUST00000042901.14

Smc4-201, Transcript of Structural maintenance of chromosomes protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc4, Length 4,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4-201ENSMUST00000042901 Rhox8Q6VSS7 320 aa22.27■■□□□ 1.16
Smc4-201ENSMUST00000042901 NischQ80TM9 1593 aa21.17■□□□□ 0.98
Smc4-201ENSMUST00000042901 Ccdc136Q3TVA9 1136 aa20.13■□□□□ 0.81
Smc4-201ENSMUST00000042901 Abcc9P70170 1546 aa20.01■□□□□ 0.79
Smc4-201ENSMUST00000042901 Trim41Q5NCC3 630 aa19.7■□□□□ 0.74
Smc4-201ENSMUST00000042901 Esf1Q3V1V3 845 aaKnown RBP19.66■□□□□ 0.74
Smc4-201ENSMUST00000042901 Abcc8B2RUS7 1588 aa19.65■□□□□ 0.74
Smc4-201ENSMUST00000042901 Ehmt2Q9Z148 1263 aaKnown RBP19.63■□□□□ 0.73
Smc4-201ENSMUST00000042901 Cngb1E1AZ71 1325 aa19.63■□□□□ 0.73
Smc4-201ENSMUST00000042901 Rpgrip1Q9EPQ2 1331 aa19.57■□□□□ 0.72
Smc4-201ENSMUST00000042901 Gab3Q8BSM5 595 aa19.35■□□□□ 0.69
Smc4-201ENSMUST00000042901 Gm35339A0A140LHH9 1649 aa19.27■□□□□ 0.68
Smc4-201ENSMUST00000042901 Ccdc180J3QNE4 1664 aa19.19■□□□□ 0.66
Smc4-201ENSMUST00000042901 Rtl1Q7M732 1744 aa19.12■□□□□ 0.65
Smc4-201ENSMUST00000042901 Zcchc6Q5BLK4 1491 aaKnown RBP19.11■□□□□ 0.65
Smc4-201ENSMUST00000042901 HrcG5E8J6 738 aa19.07■□□□□ 0.64
Smc4-201ENSMUST00000042901 Npm2Q80W85 207 aa19.04■□□□□ 0.64
Smc4-201ENSMUST00000042901 Zeb1Q64318 1117 aa18.96■□□□□ 0.63
Smc4-201ENSMUST00000042901 Myt1lP97500 1187 aa18.93■□□□□ 0.62
Smc4-201ENSMUST00000042901 Acin1Q9JIX8 1338 aaKnown RBP18.71■□□□□ 0.59
Smc4-201ENSMUST00000042901 Las1lA2BE28 776 aaKnown RBP18.67■□□□□ 0.58
Smc4-201ENSMUST00000042901 Il27Q8K3I6 234 aa18.61■□□□□ 0.57
Smc4-201ENSMUST00000042901 Wdr66E9Q743 1299 aa18.59■□□□□ 0.57
Smc4-201ENSMUST00000042901 Rb1cc1Q9ESK9 1588 aa18.56■□□□□ 0.56
Smc4-201ENSMUST00000042901 Ube2uB1AUC4 352 aa18.54■□□□□ 0.56
Smc4-201ENSMUST00000042901 UbtfP25976 765 aaKnown RBP18.54■□□□□ 0.56
Smc4-201ENSMUST00000042901 NefmP08553 848 aa18.41■□□□□ 0.54
Smc4-201ENSMUST00000042901 NacadQ5SWP3 1504 aa18.41■□□□□ 0.54
Smc4-201ENSMUST00000042901 Dcaf1Q80TR8 1506 aa18.34■□□□□ 0.53
Smc4-201ENSMUST00000042901 Brd4Q9ESU6 1400 aaKnown RBP18.32■□□□□ 0.52
Smc4-201ENSMUST00000042901 Baz1aO88379 1555 aa18.22■□□□□ 0.51
Smc4-201ENSMUST00000042901 Kdm5dQ62240 1548 aa18.15■□□□□ 0.5
Smc4-201ENSMUST00000042901 Chic1Q8CBW7 227 aa18.14■□□□□ 0.5
Smc4-201ENSMUST00000042901 Ap3b1Q9Z1T1 1105 aa18.14■□□□□ 0.49
Smc4-201ENSMUST00000042901 Cep164Q5DU05 1446 aa18.08■□□□□ 0.48
Smc4-201ENSMUST00000042901 Npm1Q61937 292 aaKnown RBP18.06■□□□□ 0.48
Smc4-201ENSMUST00000042901 Fam50aQ9WV03 339 aaKnown RBP17.97■□□□□ 0.47
Smc4-201ENSMUST00000042901 Mier1Q5UAK0 511 aa17.93■□□□□ 0.46
Smc4-201ENSMUST00000042901 Pcgf6Q99NA9 353 aa17.9■□□□□ 0.46
Smc4-201ENSMUST00000042901 Plekhg3Q4VAC9 1341 aa17.86■□□□□ 0.45
Smc4-201ENSMUST00000042901 Golga3P55937 1487 aa17.78■□□□□ 0.44
Smc4-201ENSMUST00000042901 Ubl4bQ9CQ84 188 aa17.76■□□□□ 0.43
Smc4-201ENSMUST00000042901 Lmod2Q3UHZ5 550 aa17.76■□□□□ 0.43
Smc4-201ENSMUST00000042901 ScribQ80U72 1612 aa17.76■□□□□ 0.43
Smc4-201ENSMUST00000042901 TonslQ6NZL6 1363 aa17.71■□□□□ 0.43
Smc4-201ENSMUST00000042901 Clip1Q922J3 1391 aa17.71■□□□□ 0.42
Smc4-201ENSMUST00000042901 Supt5hO55201 1082 aaKnown RBP17.7■□□□□ 0.42
Smc4-201ENSMUST00000042901 Sycp2Q9CUU3 1500 aa17.69■□□□□ 0.42
Smc4-201ENSMUST00000042901 NclP09405 707 aaKnown RBP17.67■□□□□ 0.42
Smc4-201ENSMUST00000042901 Ppargc1bQ8VHJ7 1014 aa17.64■□□□□ 0.42
Smc4-201ENSMUST00000042901 Crybg2B7ZCC2 1516 aa17.63■□□□□ 0.41
Smc4-201ENSMUST00000042901 Stra8P70278 393 aa17.62■□□□□ 0.41
Smc4-201ENSMUST00000042901 Cdk11bP24788 784 aaKnown RBP17.61■□□□□ 0.41
Smc4-201ENSMUST00000042901 Neurod1Q60867 357 aa17.61■□□□□ 0.41
Smc4-201ENSMUST00000042901 Rsf1E9PWW9 1441 aaKnown RBP17.6■□□□□ 0.41
Smc4-201ENSMUST00000042901 Slc24a1Q91WD8 1130 aa17.58■□□□□ 0.4
Smc4-201ENSMUST00000042901 Kif15Q6P9L6 1387 aa17.53■□□□□ 0.4
Smc4-201ENSMUST00000042901 Nop58Q6DFW4 536 aaKnown RBP17.52■□□□□ 0.4
Smc4-201ENSMUST00000042901 Eid3Q3V124 375 aa17.44■□□□□ 0.38
Smc4-201ENSMUST00000042901 Ercc6F8VPZ5 1481 aa17.44■□□□□ 0.38
Smc4-201ENSMUST00000042901 Cecr2E9Q2Z1 1453 aa17.42■□□□□ 0.38
Smc4-201ENSMUST00000042901 Smarca2Q6DIC0 1577 aa17.42■□□□□ 0.38
Smc4-201ENSMUST00000042901 Ccdc88bQ4QRL3 1481 aa17.41■□□□□ 0.38
Smc4-201ENSMUST00000042901 Pds5bQ4VA53 1446 aaKnown RBP17.41■□□□□ 0.38
Smc4-201ENSMUST00000042901 Setd5Q5XJV7 1441 aa17.37■□□□□ 0.37
Smc4-201ENSMUST00000042901 CftrP26361 1476 aa17.36■□□□□ 0.37
Smc4-201ENSMUST00000042901 ClspnQ80YR7 1315 aa17.35■□□□□ 0.37
Smc4-201ENSMUST00000042901 BlmO88700 1416 aa17.33■□□□□ 0.37
Smc4-201ENSMUST00000042901 Zbtb7cQ8VCZ7 619 aa17.33■□□□□ 0.36
Smc4-201ENSMUST00000042901 Pelp1Q9DBD5 1123 aaKnown RBP17.33■□□□□ 0.36
Smc4-201ENSMUST00000042901 CenpbP27790 599 aa17.32■□□□□ 0.36
Smc4-201ENSMUST00000042901 Ccdc18Q640L5 1455 aa17.32■□□□□ 0.36
Smc4-201ENSMUST00000042901 NrdcQ8BHG1 1161 aa17.32■□□□□ 0.36
Smc4-201ENSMUST00000042901 Fkbp15Q6P9Q6 1216 aaKnown RBP17.3■□□□□ 0.36
Smc4-201ENSMUST00000042901 Anp32bQ9EST5 272 aaKnown RBP17.27■□□□□ 0.36
Smc4-201ENSMUST00000042901 Os9Q8K2C7 672 aa17.26■□□□□ 0.35
Smc4-201ENSMUST00000042901 Fmn1Q05860 1466 aa17.25■□□□□ 0.35
Smc4-201ENSMUST00000042901 Ifnlr1Q8CGK5 535 aa17.25■□□□□ 0.35
Smc4-201ENSMUST00000042901 Sall2Q9QX96 1004 aa17.25■□□□□ 0.35
Smc4-201ENSMUST00000042901 Ccer2J3QPU5 274 aa17.24■□□□□ 0.35
Smc4-201ENSMUST00000042901 Hnrnpul2Q00PI9 745 aaKnown RBP17.23■□□□□ 0.35
Smc4-201ENSMUST00000042901 Eea1Q8BL66 1411 aa17.22■□□□□ 0.35
Smc4-201ENSMUST00000042901 Synj1Q8CHC4 1574 aa17.2■□□□□ 0.34
Smc4-201ENSMUST00000042901 Tnnt3Q9QZ47 272 aa17.2■□□□□ 0.34
Smc4-201ENSMUST00000042901 Chic2Q9D9G3 165 aa17.17■□□□□ 0.34
Smc4-201ENSMUST00000042901 Atad2bE9Q166 1460 aaKnown RBP17.15■□□□□ 0.34
Smc4-201ENSMUST00000042901 Cep162Q6ZQ06 1403 aa17.13■□□□□ 0.33
Smc4-201ENSMUST00000042901 Mapk8ip2Q9ERE9 830 aa17.12■□□□□ 0.33
Smc4-201ENSMUST00000042901 Smarca4Q3TKT4 1613 aaKnown RBP17.1■□□□□ 0.33
Smc4-201ENSMUST00000042901 Eif5bQ05D44 1216 aaKnown RBP17.09■□□□□ 0.33
Smc4-201ENSMUST00000042901 Erich6D3Z6S9 713 aa17■□□□□ 0.31
Smc4-201ENSMUST00000042901 Zbtb4Q5F293 982 aa16.99■□□□□ 0.31
Smc4-201ENSMUST00000042901 Cttnbp2B9EJA2 1648 aa16.98■□□□□ 0.31
Smc4-201ENSMUST00000042901 Cux2P70298 1426 aa16.97■□□□□ 0.31
Smc4-201ENSMUST00000042901 Phldb1Q6PDH0 1371 aaKnown RBP16.97■□□□□ 0.31
Smc4-201ENSMUST00000042901 Arhgap27A2AB59 869 aa16.97■□□□□ 0.31
Smc4-201ENSMUST00000042901 Aebp2Q9Z248 504 aaKnown RBP16.92■□□□□ 0.3
Smc4-201ENSMUST00000042901 Rapgef2Q8CHG7 1496 aa16.91■□□□□ 0.3
Smc4-201ENSMUST00000042901 Hdac5Q9Z2V6 1113 aa16.89■□□□□ 0.29
Smc4-201ENSMUST00000042901 NeflP08551 543 aa16.89■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 73.2 ms