RNA–Protein interactions for RNA: ENSMUST00000041524.10

Trmt13-201, Transcript of tRNA:m(4)X modification enzyme TRM13 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trmt13, Length 3,402 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt13-201ENSMUST00000041524 Rpgrip1Q9EPQ2 1331 aa15.61■□□□□ 0.09
Trmt13-201ENSMUST00000041524 Ehmt2Q9Z148 1263 aaKnown RBP15.34■□□□□ 0.05
Trmt13-201ENSMUST00000041524 Rhox8Q6VSS7 320 aa15.22■□□□□ 0.03
Trmt13-201ENSMUST00000041524 Pcgf6Q99NA9 353 aa15.09■□□□□ 0.01
Trmt13-201ENSMUST00000041524 Acin1Q9JIX8 1338 aaKnown RBP14.96□□□□□ -0.01
Trmt13-201ENSMUST00000041524 Las1lA2BE28 776 aaKnown RBP14.83□□□□□ -0.04
Trmt13-201ENSMUST00000041524 Supt5hO55201 1082 aaKnown RBP14.63□□□□□ -0.07
Trmt13-201ENSMUST00000041524 Neurod1Q60867 357 aa14.61□□□□□ -0.07
Trmt13-201ENSMUST00000041524 CenpbP27790 599 aa14.54□□□□□ -0.08
Trmt13-201ENSMUST00000041524 DiexfQ8BTT6 772 aaKnown RBP14.5□□□□□ -0.09
Trmt13-201ENSMUST00000041524 Zeb1Q64318 1117 aa14.49□□□□□ -0.09
Trmt13-201ENSMUST00000041524 1700123L14RikQ3V2K7 440 aa14.32□□□□□ -0.12
Trmt13-201ENSMUST00000041524 Myt1Q8CFC2 1127 aa14.31□□□□□ -0.12
Trmt13-201ENSMUST00000041524 Csrnp3P59055 597 aa14.27□□□□□ -0.12
Trmt13-201ENSMUST00000041524 Cngb1E1AZ71 1325 aa14.2□□□□□ -0.14
Trmt13-201ENSMUST00000041524 Gm38655A0A286YDK6 273 aa14.16□□□□□ -0.14
Trmt13-201ENSMUST00000041524 Wdr66E9Q743 1299 aa14.1□□□□□ -0.15
Trmt13-201ENSMUST00000041524 Ccdc180J3QNE4 1664 aa14.07□□□□□ -0.16
Trmt13-201ENSMUST00000041524 Bcl11aQ9QYE3 773 aa14.06□□□□□ -0.16
Trmt13-201ENSMUST00000041524 Trim41Q5NCC3 630 aa14.01□□□□□ -0.17
Trmt13-201ENSMUST00000041524 Anks4bQ8K3X6 423 aa13.97□□□□□ -0.17
Trmt13-201ENSMUST00000041524 Amer1Q7TS75 1132 aa13.97□□□□□ -0.17
Trmt13-201ENSMUST00000041524 Ppargc1bQ8VHJ7 1014 aa13.96□□□□□ -0.18
Trmt13-201ENSMUST00000041524 Sall2Q9QX96 1004 aa13.91□□□□□ -0.18
Trmt13-201ENSMUST00000041524 NischQ80TM9 1593 aa13.9□□□□□ -0.18
Trmt13-201ENSMUST00000041524 Ccdc136Q3TVA9 1136 aa13.89□□□□□ -0.19
Trmt13-201ENSMUST00000041524 Cdk11bP24788 784 aaKnown RBP13.88□□□□□ -0.19
Trmt13-201ENSMUST00000041524 Aplp2Q06335 707 aa13.86□□□□□ -0.19
Trmt13-201ENSMUST00000041524 Rtl1Q7M732 1744 aa13.82□□□□□ -0.2
Trmt13-201ENSMUST00000041524 Nop58Q6DFW4 536 aaKnown RBP13.8□□□□□ -0.2
Trmt13-201ENSMUST00000041524 PrkcshO08795 521 aa13.79□□□□□ -0.2
Trmt13-201ENSMUST00000041524 NefmP08553 848 aa13.73□□□□□ -0.21
Trmt13-201ENSMUST00000041524 Ttbk1Q6PCN3 1308 aa13.69□□□□□ -0.22
Trmt13-201ENSMUST00000041524 Dcaf1Q80TR8 1506 aa13.68□□□□□ -0.22
Trmt13-201ENSMUST00000041524 HrcG5E8J6 738 aa13.68□□□□□ -0.22
Trmt13-201ENSMUST00000041524 Gab3Q8BSM5 595 aa13.67□□□□□ -0.22
Trmt13-201ENSMUST00000041524 Fam71e1A1L3C1 212 aa13.66□□□□□ -0.22
Trmt13-201ENSMUST00000041524 Mapk8ip2Q9ERE9 830 aa13.64□□□□□ -0.23
Trmt13-201ENSMUST00000041524 Ifnlr1Q8CGK5 535 aa13.6□□□□□ -0.23
Trmt13-201ENSMUST00000041524 Mier1Q5UAK0 511 aa13.56□□□□□ -0.24
Trmt13-201ENSMUST00000041524 Pelp1Q9DBD5 1123 aaKnown RBP13.49□□□□□ -0.25
Trmt13-201ENSMUST00000041524 SafbD3YXK2 937 aaKnown RBP13.44□□□□□ -0.26
Trmt13-201ENSMUST00000041524 Aebp2Q9Z248 504 aaKnown RBP13.43□□□□□ -0.26
Trmt13-201ENSMUST00000041524 UbtfP25976 765 aaKnown RBP13.42□□□□□ -0.26
Trmt13-201ENSMUST00000041524 Gm35339A0A140LHH9 1649 aa13.36□□□□□ -0.27
Trmt13-201ENSMUST00000041524 ClspnQ80YR7 1315 aa13.34□□□□□ -0.27
Trmt13-201ENSMUST00000041524 Ap3b1Q9Z1T1 1105 aa13.3□□□□□ -0.28
Trmt13-201ENSMUST00000041524 Tnnt3Q9QZ47 272 aa13.29□□□□□ -0.28
Trmt13-201ENSMUST00000041524 Hnrnpul2Q00PI9 745 aaKnown RBP13.27□□□□□ -0.28
Trmt13-201ENSMUST00000041524 Anp32aO35381 247 aa13.27□□□□□ -0.29
Trmt13-201ENSMUST00000041524 Abcc9P70170 1546 aa13.22□□□□□ -0.29
Trmt13-201ENSMUST00000041524 Slc24a1Q91WD8 1130 aa13.22□□□□□ -0.29
Trmt13-201ENSMUST00000041524 Rtl5Q5DTT4 599 aa13.19□□□□□ -0.3
Trmt13-201ENSMUST00000041524 Zcchc6Q5BLK4 1491 aaKnown RBP13.16□□□□□ -0.3
Trmt13-201ENSMUST00000041524 Hdac5Q9Z2V6 1113 aa13.14□□□□□ -0.31
Trmt13-201ENSMUST00000041524 TonslQ6NZL6 1363 aa13.12□□□□□ -0.31
Trmt13-201ENSMUST00000041524 4933416C03RikQ3V063 378 aa13.08□□□□□ -0.32
Trmt13-201ENSMUST00000041524 Pknox2Q8BG99 474 aa13.02□□□□□ -0.32
Trmt13-201ENSMUST00000041524 Myt1lP97500 1187 aa13.02□□□□□ -0.33
Trmt13-201ENSMUST00000041524 Eif5bQ05D44 1216 aaKnown RBP13.01□□□□□ -0.33
Trmt13-201ENSMUST00000041524 Stra8P70278 393 aa12.96□□□□□ -0.33
Trmt13-201ENSMUST00000041524 Calr4Q3TQS0 420 aa12.95□□□□□ -0.34
Trmt13-201ENSMUST00000041524 Ppp4r2Q0VGB7 417 aa12.95□□□□□ -0.34
Trmt13-201ENSMUST00000041524 Nolc1E9Q5C9 702 aaKnown RBP12.95□□□□□ -0.34
Trmt13-201ENSMUST00000041524 Plcd4Q8K3R3 807 aa12.94□□□□□ -0.34
Trmt13-201ENSMUST00000041524 Il27Q8K3I6 234 aa12.92□□□□□ -0.34
Trmt13-201ENSMUST00000041524 Gtf3c3Q3TMP1 882 aa12.91□□□□□ -0.34
Trmt13-201ENSMUST00000041524 Eid3Q3V124 375 aa12.9□□□□□ -0.34
Trmt13-201ENSMUST00000041524 Chic1Q8CBW7 227 aa12.9□□□□□ -0.35
Trmt13-201ENSMUST00000041524 Cep164Q5DU05 1446 aa12.89□□□□□ -0.35
Trmt13-201ENSMUST00000041524 DaxxO35613 739 aa12.89□□□□□ -0.35
Trmt13-201ENSMUST00000041524 Supt16hQ920B9 1047 aa12.88□□□□□ -0.35
Trmt13-201ENSMUST00000041524 Irx3P81067 507 aa12.86□□□□□ -0.35
Trmt13-201ENSMUST00000041524 Upf2A2AT37 1269 aaKnown RBP12.85□□□□□ -0.35
Trmt13-201ENSMUST00000041524 Fgd1P52734 960 aa12.81□□□□□ -0.36
Trmt13-201ENSMUST00000041524 Ccdc27Q3V036 639 aa12.8□□□□□ -0.36
Trmt13-201ENSMUST00000041524 NrdcQ8BHG1 1161 aa12.8□□□□□ -0.36
Trmt13-201ENSMUST00000041524 Wdr43Q6ZQL4 677 aaKnown RBP12.79□□□□□ -0.36
Trmt13-201ENSMUST00000041524 NclP09405 707 aaKnown RBP12.78□□□□□ -0.36
Trmt13-201ENSMUST00000041524 Hsp90aa1P07901 733 aaKnown RBP12.76□□□□□ -0.37
Trmt13-201ENSMUST00000041524 Esf1Q3V1V3 845 aaKnown RBP12.74□□□□□ -0.37
Trmt13-201ENSMUST00000041524 Abcc8B2RUS7 1588 aa12.74□□□□□ -0.37
Trmt13-201ENSMUST00000041524 Taok2Q6ZQ29 1240 aa12.73□□□□□ -0.37
Trmt13-201ENSMUST00000041524 Plekhg3Q4VAC9 1341 aa12.71□□□□□ -0.37
Trmt13-201ENSMUST00000041524 Ccdc9Q8VC31 543 aaKnown RBP12.68□□□□□ -0.38
Trmt13-201ENSMUST00000041524 Npm2Q80W85 207 aa12.67□□□□□ -0.38
Trmt13-201ENSMUST00000041524 P3h3Q8CG70 732 aa12.67□□□□□ -0.38
Trmt13-201ENSMUST00000041524 Slc4a3P16283 1227 aa12.65□□□□□ -0.38
Trmt13-201ENSMUST00000041524 Rtn4Q99P72 1162 aaKnown RBP12.65□□□□□ -0.39
Trmt13-201ENSMUST00000041524 Ube2uB1AUC4 352 aa12.63□□□□□ -0.39
Trmt13-201ENSMUST00000041524 Zbtb4Q5F293 982 aa12.63□□□□□ -0.39
Trmt13-201ENSMUST00000041524 Pak3Q61036 559 aa12.62□□□□□ -0.39
Trmt13-201ENSMUST00000041524 Znf710Q3U288 666 aa12.57□□□□□ -0.4
Trmt13-201ENSMUST00000041524 Zbtb7cQ8VCZ7 619 aa12.57□□□□□ -0.4
Trmt13-201ENSMUST00000041524 Znf692Q3U381 531 aa12.53□□□□□ -0.4
Trmt13-201ENSMUST00000041524 Ipo4Q8VI75 1082 aa12.53□□□□□ -0.4
Trmt13-201ENSMUST00000041524 Rsf1E9PWW9 1441 aaKnown RBP12.52□□□□□ -0.4
Trmt13-201ENSMUST00000041524 Fam50aQ9WV03 339 aaKnown RBP12.52□□□□□ -0.4
Trmt13-201ENSMUST00000041524 Ccer2J3QPU5 274 aa12.49□□□□□ -0.41
Trmt13-201ENSMUST00000041524 Zfp777B9EKF4 885 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms