RNA–Protein interactions for RNA: ENSMUST00000041447.4

Trpa1-201, Transcript of Transient receptor potential cation channel subfamily A member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trpa1, Length 4,263 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1-201ENSMUST00000041447 NischQ80TM9 1593 aa15.95■□□□□ 0.14
Trpa1-201ENSMUST00000041447 Gm35339A0A140LHH9 1649 aa15.47■□□□□ 0.07
Trpa1-201ENSMUST00000041447 Abcc9P70170 1546 aa15.46■□□□□ 0.07
Trpa1-201ENSMUST00000041447 Abcc8B2RUS7 1588 aa15.09■□□□□ 0.01
Trpa1-201ENSMUST00000041447 Rhox8Q6VSS7 320 aa15.09■□□□□ 0.01
Trpa1-201ENSMUST00000041447 Rtl1Q7M732 1744 aa14.62□□□□□ -0.07
Trpa1-201ENSMUST00000041447 Ccdc180J3QNE4 1664 aa14.48□□□□□ -0.09
Trpa1-201ENSMUST00000041447 Zcchc6Q5BLK4 1491 aaKnown RBP14.36□□□□□ -0.11
Trpa1-201ENSMUST00000041447 Ehmt2Q9Z148 1263 aaKnown RBP14.13□□□□□ -0.15
Trpa1-201ENSMUST00000041447 ScribQ80U72 1612 aa14.1□□□□□ -0.15
Trpa1-201ENSMUST00000041447 Ccdc136Q3TVA9 1136 aa14.06□□□□□ -0.16
Trpa1-201ENSMUST00000041447 Rb1cc1Q9ESK9 1588 aa14□□□□□ -0.17
Trpa1-201ENSMUST00000041447 Dcaf1Q80TR8 1506 aa13.9□□□□□ -0.18
Trpa1-201ENSMUST00000041447 Rpgrip1Q9EPQ2 1331 aa13.86□□□□□ -0.19
Trpa1-201ENSMUST00000041447 Acin1Q9JIX8 1338 aaKnown RBP13.86□□□□□ -0.19
Trpa1-201ENSMUST00000041447 Kdm5dQ62240 1548 aa13.82□□□□□ -0.2
Trpa1-201ENSMUST00000041447 HrcG5E8J6 738 aa13.79□□□□□ -0.2
Trpa1-201ENSMUST00000041447 Baz1aO88379 1555 aa13.77□□□□□ -0.2
Trpa1-201ENSMUST00000041447 Trim41Q5NCC3 630 aa13.68□□□□□ -0.22
Trpa1-201ENSMUST00000041447 NacadQ5SWP3 1504 aa13.55□□□□□ -0.24
Trpa1-201ENSMUST00000041447 Smarca2Q6DIC0 1577 aa13.51□□□□□ -0.25
Trpa1-201ENSMUST00000041447 Pcgf6Q99NA9 353 aa13.49□□□□□ -0.25
Trpa1-201ENSMUST00000041447 Cep164Q5DU05 1446 aa13.42□□□□□ -0.26
Trpa1-201ENSMUST00000041447 Chic1Q8CBW7 227 aa13.42□□□□□ -0.26
Trpa1-201ENSMUST00000041447 Gab3Q8BSM5 595 aa13.37□□□□□ -0.27
Trpa1-201ENSMUST00000041447 Rsf1E9PWW9 1441 aaKnown RBP13.36□□□□□ -0.27
Trpa1-201ENSMUST00000041447 Cngb1E1AZ71 1325 aa13.35□□□□□ -0.27
Trpa1-201ENSMUST00000041447 Supt5hO55201 1082 aaKnown RBP13.32□□□□□ -0.28
Trpa1-201ENSMUST00000041447 Crybg2B7ZCC2 1516 aa13.32□□□□□ -0.28
Trpa1-201ENSMUST00000041447 Cecr2E9Q2Z1 1453 aa13.31□□□□□ -0.28
Trpa1-201ENSMUST00000041447 Sycp2Q9CUU3 1500 aa13.3□□□□□ -0.28
Trpa1-201ENSMUST00000041447 Ccdc88bQ4QRL3 1481 aa13.28□□□□□ -0.28
Trpa1-201ENSMUST00000041447 Synj1Q8CHC4 1574 aa13.16□□□□□ -0.3
Trpa1-201ENSMUST00000041447 Zeb1Q64318 1117 aa13.12□□□□□ -0.31
Trpa1-201ENSMUST00000041447 Brd4Q9ESU6 1400 aaKnown RBP13.12□□□□□ -0.31
Trpa1-201ENSMUST00000041447 BicraF8VPZ9 1578 aa13.11□□□□□ -0.31
Trpa1-201ENSMUST00000041447 Golga3P55937 1487 aa13.1□□□□□ -0.31
Trpa1-201ENSMUST00000041447 Mier1Q5UAK0 511 aa13.08□□□□□ -0.32
Trpa1-201ENSMUST00000041447 Esf1Q3V1V3 845 aaKnown RBP13.02□□□□□ -0.33
Trpa1-201ENSMUST00000041447 Neurod1Q60867 357 aa13.01□□□□□ -0.33
Trpa1-201ENSMUST00000041447 CftrP26361 1476 aa13□□□□□ -0.33
Trpa1-201ENSMUST00000041447 Top2bQ64511 1612 aa12.95□□□□□ -0.34
Trpa1-201ENSMUST00000041447 Cc2d2aQ8CFW7 1633 aa12.95□□□□□ -0.34
Trpa1-201ENSMUST00000041447 Sall2Q9QX96 1004 aa12.93□□□□□ -0.34
Trpa1-201ENSMUST00000041447 UbtfP25976 765 aaKnown RBP12.88□□□□□ -0.35
Trpa1-201ENSMUST00000041447 Cttnbp2B9EJA2 1648 aa12.85□□□□□ -0.35
Trpa1-201ENSMUST00000041447 NefmP08553 848 aa12.84□□□□□ -0.35
Trpa1-201ENSMUST00000041447 Ppargc1bQ8VHJ7 1014 aa12.81□□□□□ -0.36
Trpa1-201ENSMUST00000041447 Aebp2Q9Z248 504 aaKnown RBP12.81□□□□□ -0.36
Trpa1-201ENSMUST00000041447 Myt1lP97500 1187 aa12.8□□□□□ -0.36
Trpa1-201ENSMUST00000041447 Rapgef2Q8CHG7 1496 aa12.78□□□□□ -0.36
Trpa1-201ENSMUST00000041447 Smarca4Q3TKT4 1613 aaKnown RBP12.76□□□□□ -0.37
Trpa1-201ENSMUST00000041447 Top2aQ01320 1528 aaKnown RBP12.72□□□□□ -0.37
Trpa1-201ENSMUST00000041447 Cep162Q6ZQ06 1403 aa12.7□□□□□ -0.38
Trpa1-201ENSMUST00000041447 Wdr66E9Q743 1299 aa12.68□□□□□ -0.38
Trpa1-201ENSMUST00000041447 Fmn1Q05860 1466 aa12.68□□□□□ -0.38
Trpa1-201ENSMUST00000041447 Plekhg3Q4VAC9 1341 aa12.67□□□□□ -0.38
Trpa1-201ENSMUST00000041447 Npm2Q80W85 207 aa12.62□□□□□ -0.39
Trpa1-201ENSMUST00000041447 Iqgap2Q3UQ44 1575 aa12.61□□□□□ -0.39
Trpa1-201ENSMUST00000041447 Csrnp3P59055 597 aa12.59□□□□□ -0.39
Trpa1-201ENSMUST00000041447 Eif4g1Q6NZJ6 1600 aaKnown RBP12.56□□□□□ -0.4
Trpa1-201ENSMUST00000041447 Las1lA2BE28 776 aaKnown RBP12.56□□□□□ -0.4
Trpa1-201ENSMUST00000041447 Clip1Q922J3 1391 aa12.55□□□□□ -0.4
Trpa1-201ENSMUST00000041447 PtprkP35822 1457 aa12.53□□□□□ -0.4
Trpa1-201ENSMUST00000041447 1700123L14RikQ3V2K7 440 aa12.52□□□□□ -0.41
Trpa1-201ENSMUST00000041447 Ap3b1Q9Z1T1 1105 aa12.51□□□□□ -0.41
Trpa1-201ENSMUST00000041447 Anks4bQ8K3X6 423 aa12.51□□□□□ -0.41
Trpa1-201ENSMUST00000041447 ClspnQ80YR7 1315 aa12.49□□□□□ -0.41
Trpa1-201ENSMUST00000041447 TonslQ6NZL6 1363 aa12.48□□□□□ -0.41
Trpa1-201ENSMUST00000041447 Eid3Q3V124 375 aa12.48□□□□□ -0.41
Trpa1-201ENSMUST00000041447 Ncapd3Q6ZQK0 1506 aa12.48□□□□□ -0.41
Trpa1-201ENSMUST00000041447 Il27Q8K3I6 234 aa12.48□□□□□ -0.41
Trpa1-201ENSMUST00000041447 Arhgap35Q91YM2 1499 aa12.46□□□□□ -0.41
Trpa1-201ENSMUST00000041447 Nop58Q6DFW4 536 aaKnown RBP12.46□□□□□ -0.41
Trpa1-201ENSMUST00000041447 Arap1Q4LDD4 1452 aa12.45□□□□□ -0.42
Trpa1-201ENSMUST00000041447 Gm38655A0A286YDK6 273 aa12.44□□□□□ -0.42
Trpa1-201ENSMUST00000041447 TnnQ80Z71 1560 aa12.44□□□□□ -0.42
Trpa1-201ENSMUST00000041447 Cdk11bP24788 784 aaKnown RBP12.42□□□□□ -0.42
Trpa1-201ENSMUST00000041447 Atad2bE9Q166 1460 aaKnown RBP12.42□□□□□ -0.42
Trpa1-201ENSMUST00000041447 Frmpd1A2AKB4 1549 aa12.38□□□□□ -0.43
Trpa1-201ENSMUST00000041447 Kdm5bQ80Y84 1544 aa12.36□□□□□ -0.43
Trpa1-201ENSMUST00000041447 Mapk8ip2Q9ERE9 830 aa12.34□□□□□ -0.43
Trpa1-201ENSMUST00000041447 NrkQ9R0G8 1455 aa12.34□□□□□ -0.43
Trpa1-201ENSMUST00000041447 AqrQ8CFQ3 1481 aaKnown RBP12.33□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Eea1Q8BL66 1411 aa12.33□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Setd5Q5XJV7 1441 aa12.32□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Arhgef5E9Q7D5 1581 aa12.32□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Kif15Q6P9L6 1387 aa12.32□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Wdr62Q3U3T8 1523 aa12.31□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Unc13aQ4KUS2 1712 aa12.3□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Pds5bQ4VA53 1446 aaKnown RBP12.28□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Lamc3Q9R0B6 1581 aa12.28□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Shroom4Q1W617 1475 aa12.28□□□□□ -0.44
Trpa1-201ENSMUST00000041447 Camsap1A2AHC3 1581 aa12.27□□□□□ -0.45
Trpa1-201ENSMUST00000041447 Lmod2Q3UHZ5 550 aa12.24□□□□□ -0.45
Trpa1-201ENSMUST00000041447 Tiam1Q60610 1591 aa12.23□□□□□ -0.45
Trpa1-201ENSMUST00000041447 Slx4Q6P1D7 1565 aa12.22□□□□□ -0.45
Trpa1-201ENSMUST00000041447 Naip1Q9QWK5 1403 aa12.22□□□□□ -0.45
Trpa1-201ENSMUST00000041447 BlmO88700 1416 aa12.21□□□□□ -0.45
Trpa1-201ENSMUST00000041447 Ankrd26Q811D2 1581 aa12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 240.2 ms