RNA–Protein interactions for RNA: ENSMUST00000039449.7

Ltn1-201, Transcript of E3 ubiquitin-protein ligase listerin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ltn1, Length 7,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1-201ENSMUST00000039449 Rhox8Q6VSS7 320 aa14.51□□□□□ -0.09
Ltn1-201ENSMUST00000039449 Rpgrip1Q9EPQ2 1331 aa13.55□□□□□ -0.24
Ltn1-201ENSMUST00000039449 Ehmt2Q9Z148 1263 aaKnown RBP13.31□□□□□ -0.28
Ltn1-201ENSMUST00000039449 Las1lA2BE28 776 aaKnown RBP13.01□□□□□ -0.33
Ltn1-201ENSMUST00000039449 Cngb1E1AZ71 1325 aa12.96□□□□□ -0.33
Ltn1-201ENSMUST00000039449 Ccdc136Q3TVA9 1136 aa12.92□□□□□ -0.34
Ltn1-201ENSMUST00000039449 Wdr66E9Q743 1299 aa12.87□□□□□ -0.35
Ltn1-201ENSMUST00000039449 Zeb1Q64318 1117 aa12.82□□□□□ -0.36
Ltn1-201ENSMUST00000039449 Esf1Q3V1V3 845 aaKnown RBP12.71□□□□□ -0.38
Ltn1-201ENSMUST00000039449 Gab3Q8BSM5 595 aa12.68□□□□□ -0.38
Ltn1-201ENSMUST00000039449 Pelp1Q9DBD5 1123 aaKnown RBP12.64□□□□□ -0.39
Ltn1-201ENSMUST00000039449 NischQ80TM9 1593 aa12.62□□□□□ -0.39
Ltn1-201ENSMUST00000039449 Trim41Q5NCC3 630 aa12.59□□□□□ -0.39
Ltn1-201ENSMUST00000039449 Ube2uB1AUC4 352 aa12.58□□□□□ -0.4
Ltn1-201ENSMUST00000039449 Acin1Q9JIX8 1338 aaKnown RBP12.55□□□□□ -0.4
Ltn1-201ENSMUST00000039449 Npm2Q80W85 207 aa12.47□□□□□ -0.41
Ltn1-201ENSMUST00000039449 Myt1lP97500 1187 aa12.44□□□□□ -0.42
Ltn1-201ENSMUST00000039449 CenpbP27790 599 aa12.4□□□□□ -0.42
Ltn1-201ENSMUST00000039449 Ccdc180J3QNE4 1664 aa12.37□□□□□ -0.43
Ltn1-201ENSMUST00000039449 NefmP08553 848 aa12.36□□□□□ -0.43
Ltn1-201ENSMUST00000039449 UbtfP25976 765 aaKnown RBP12.3□□□□□ -0.44
Ltn1-201ENSMUST00000039449 Rtl1Q7M732 1744 aa12.3□□□□□ -0.44
Ltn1-201ENSMUST00000039449 Amer1Q7TS75 1132 aa12.23□□□□□ -0.45
Ltn1-201ENSMUST00000039449 Pcgf6Q99NA9 353 aa12.22□□□□□ -0.45
Ltn1-201ENSMUST00000039449 Stra8P70278 393 aa12.2□□□□□ -0.46
Ltn1-201ENSMUST00000039449 Slc24a1Q91WD8 1130 aa12.17□□□□□ -0.46
Ltn1-201ENSMUST00000039449 HrcG5E8J6 738 aa12.14□□□□□ -0.47
Ltn1-201ENSMUST00000039449 Cdk11bP24788 784 aaKnown RBP12.12□□□□□ -0.47
Ltn1-201ENSMUST00000039449 Nop58Q6DFW4 536 aaKnown RBP11.99□□□□□ -0.49
Ltn1-201ENSMUST00000039449 Supt5hO55201 1082 aaKnown RBP11.97□□□□□ -0.49
Ltn1-201ENSMUST00000039449 Ttbk1Q6PCN3 1308 aa11.97□□□□□ -0.49
Ltn1-201ENSMUST00000039449 Myt1Q8CFC2 1127 aa11.96□□□□□ -0.49
Ltn1-201ENSMUST00000039449 Ppargc1bQ8VHJ7 1014 aa11.93□□□□□ -0.5
Ltn1-201ENSMUST00000039449 Tnnt3Q9QZ47 272 aa11.91□□□□□ -0.5
Ltn1-201ENSMUST00000039449 Il27Q8K3I6 234 aa11.88□□□□□ -0.51
Ltn1-201ENSMUST00000039449 NclP09405 707 aaKnown RBP11.87□□□□□ -0.51
Ltn1-201ENSMUST00000039449 Fam50aQ9WV03 339 aaKnown RBP11.86□□□□□ -0.51
Ltn1-201ENSMUST00000039449 NrdcQ8BHG1 1161 aa11.85□□□□□ -0.51
Ltn1-201ENSMUST00000039449 Ap3b1Q9Z1T1 1105 aa11.82□□□□□ -0.52
Ltn1-201ENSMUST00000039449 4933416C03RikQ3V063 378 aa11.82□□□□□ -0.52
Ltn1-201ENSMUST00000039449 Eif5bQ05D44 1216 aaKnown RBP11.82□□□□□ -0.52
Ltn1-201ENSMUST00000039449 Neurod1Q60867 357 aa11.81□□□□□ -0.52
Ltn1-201ENSMUST00000039449 TonslQ6NZL6 1363 aa11.8□□□□□ -0.52
Ltn1-201ENSMUST00000039449 Zcchc6Q5BLK4 1491 aaKnown RBP11.8□□□□□ -0.52
Ltn1-201ENSMUST00000039449 Mier1Q5UAK0 511 aa11.76□□□□□ -0.53
Ltn1-201ENSMUST00000039449 Anp32bQ9EST5 272 aaKnown RBP11.76□□□□□ -0.53
Ltn1-201ENSMUST00000039449 NeflP08551 543 aa11.76□□□□□ -0.53
Ltn1-201ENSMUST00000039449 Abcc9P70170 1546 aa11.69□□□□□ -0.54
Ltn1-201ENSMUST00000039449 4930567H17RikQ3V0K5 233 aa11.68□□□□□ -0.54
Ltn1-201ENSMUST00000039449 Rtl5Q5DTT4 599 aa11.63□□□□□ -0.55
Ltn1-201ENSMUST00000039449 ClspnQ80YR7 1315 aa11.61□□□□□ -0.55
Ltn1-201ENSMUST00000039449 Gm35339A0A140LHH9 1649 aa11.59□□□□□ -0.55
Ltn1-201ENSMUST00000039449 Os9Q8K2C7 672 aa11.59□□□□□ -0.55
Ltn1-201ENSMUST00000039449 Plekhg3Q4VAC9 1341 aa11.54□□□□□ -0.56
Ltn1-201ENSMUST00000039449 Anp32aO35381 247 aa11.52□□□□□ -0.57
Ltn1-201ENSMUST00000039449 DiexfQ8BTT6 772 aaKnown RBP11.49□□□□□ -0.57
Ltn1-201ENSMUST00000039449 Lmod2Q3UHZ5 550 aa11.47□□□□□ -0.57
Ltn1-201ENSMUST00000039449 Csrnp3P59055 597 aa11.47□□□□□ -0.57
Ltn1-201ENSMUST00000039449 Sall2Q9QX96 1004 aa11.47□□□□□ -0.57
Ltn1-201ENSMUST00000039449 Gm38655A0A286YDK6 273 aa11.47□□□□□ -0.57
Ltn1-201ENSMUST00000039449 Mapk8ip2Q9ERE9 830 aa11.46□□□□□ -0.57
Ltn1-201ENSMUST00000039449 Anks4bQ8K3X6 423 aa11.45□□□□□ -0.58
Ltn1-201ENSMUST00000039449 DaxxO35613 739 aa11.44□□□□□ -0.58
Ltn1-201ENSMUST00000039449 Dcaf1Q80TR8 1506 aa11.43□□□□□ -0.58
Ltn1-201ENSMUST00000039449 Eid3Q3V124 375 aa11.41□□□□□ -0.58
Ltn1-201ENSMUST00000039449 Zbtb7cQ8VCZ7 619 aa11.41□□□□□ -0.58
Ltn1-201ENSMUST00000039449 Abcc8B2RUS7 1588 aa11.37□□□□□ -0.59
Ltn1-201ENSMUST00000039449 Aplp2Q06335 707 aa11.34□□□□□ -0.59
Ltn1-201ENSMUST00000039449 Zbtb4Q5F293 982 aa11.33□□□□□ -0.6
Ltn1-201ENSMUST00000039449 Npm1Q61937 292 aaKnown RBP11.32□□□□□ -0.6
Ltn1-201ENSMUST00000039449 Hnrnpul2Q00PI9 745 aaKnown RBP11.32□□□□□ -0.6
Ltn1-201ENSMUST00000039449 Cep164Q5DU05 1446 aa11.32□□□□□ -0.6
Ltn1-201ENSMUST00000039449 Clip1Q922J3 1391 aa11.29□□□□□ -0.6
Ltn1-201ENSMUST00000039449 Chic1Q8CBW7 227 aa11.29□□□□□ -0.6
Ltn1-201ENSMUST00000039449 Calr4Q3TQS0 420 aa11.26□□□□□ -0.61
Ltn1-201ENSMUST00000039449 Nlrp6Q91WS2 869 aa11.25□□□□□ -0.61
Ltn1-201ENSMUST00000039449 Ppp4r2Q0VGB7 417 aa11.24□□□□□ -0.61
Ltn1-201ENSMUST00000039449 Brd4Q9ESU6 1400 aaKnown RBP11.24□□□□□ -0.61
Ltn1-201ENSMUST00000039449 ArxO35085 564 aa11.23□□□□□ -0.61
Ltn1-201ENSMUST00000039449 Polr3glQ8R0C0 218 aa11.23□□□□□ -0.61
Ltn1-201ENSMUST00000039449 Prdm10Q3UTQ7 1184 aa11.21□□□□□ -0.62
Ltn1-201ENSMUST00000039449 Erich6D3Z6S9 713 aa11.2□□□□□ -0.62
Ltn1-201ENSMUST00000039449 Ccer2J3QPU5 274 aa11.17□□□□□ -0.62
Ltn1-201ENSMUST00000039449 Rb1cc1Q9ESK9 1588 aa11.17□□□□□ -0.62
Ltn1-201ENSMUST00000039449 Wdr43Q6ZQL4 677 aaKnown RBP11.14□□□□□ -0.63
Ltn1-201ENSMUST00000039449 Ifnlr1Q8CGK5 535 aa11.12□□□□□ -0.63
Ltn1-201ENSMUST00000039449 Atp1b4Q99ME6 356 aa11.12□□□□□ -0.63
Ltn1-201ENSMUST00000039449 1700123L14RikQ3V2K7 440 aa11.11□□□□□ -0.63
Ltn1-201ENSMUST00000039449 Mrs2Q5NCE8 434 aa11.11□□□□□ -0.63
Ltn1-201ENSMUST00000039449 Gm13697A2AK42 830 aa11.1□□□□□ -0.63
Ltn1-201ENSMUST00000039449 Upf2A2AT37 1269 aaKnown RBP11.08□□□□□ -0.64
Ltn1-201ENSMUST00000039449 Rad21Q61550 635 aaKnown RBP11.08□□□□□ -0.64
Ltn1-201ENSMUST00000039449 Aebp2Q9Z248 504 aaKnown RBP11.08□□□□□ -0.64
Ltn1-201ENSMUST00000039449 Hdac5Q9Z2V6 1113 aa11.07□□□□□ -0.64
Ltn1-201ENSMUST00000039449 Chic2Q9D9G3 165 aa11.07□□□□□ -0.64
Ltn1-201ENSMUST00000039449 Fkbp15Q6P9Q6 1216 aaKnown RBP11.06□□□□□ -0.64
Ltn1-201ENSMUST00000039449 BlmO88700 1416 aa11.06□□□□□ -0.64
Ltn1-201ENSMUST00000039449 Fam71e1A1L3C1 212 aa11.05□□□□□ -0.64
Ltn1-201ENSMUST00000039449 Rangap1P46061 589 aaKnown RBP11.05□□□□□ -0.64
Ltn1-201ENSMUST00000039449 Hsp90aa1P07901 733 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 87 ms