RNA–Protein interactions for RNA: ENSMUST00000039061.14

Trappc11-201, Transcript of Trafficking protein particle complex subunit 11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trappc11, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc11-201ENSMUST00000039061 Rhox8Q6VSS7 320 aa20.1■□□□□ 0.81
Trappc11-201ENSMUST00000039061 Rpgrip1Q9EPQ2 1331 aa19.37■□□□□ 0.69
Trappc11-201ENSMUST00000039061 Ehmt2Q9Z148 1263 aaKnown RBP19.12■□□□□ 0.65
Trappc11-201ENSMUST00000039061 NischQ80TM9 1593 aa18.86■□□□□ 0.61
Trappc11-201ENSMUST00000039061 Acin1Q9JIX8 1338 aaKnown RBP18.57■□□□□ 0.56
Trappc11-201ENSMUST00000039061 Ccdc136Q3TVA9 1136 aa18.29■□□□□ 0.52
Trappc11-201ENSMUST00000039061 Pcgf6Q99NA9 353 aa18.29■□□□□ 0.52
Trappc11-201ENSMUST00000039061 Ccdc180J3QNE4 1664 aa18.19■□□□□ 0.5
Trappc11-201ENSMUST00000039061 Zeb1Q64318 1117 aa18.14■□□□□ 0.49
Trappc11-201ENSMUST00000039061 Las1lA2BE28 776 aaKnown RBP18.12■□□□□ 0.49
Trappc11-201ENSMUST00000039061 Rtl1Q7M732 1744 aa18■□□□□ 0.47
Trappc11-201ENSMUST00000039061 Trim41Q5NCC3 630 aa17.96■□□□□ 0.47
Trappc11-201ENSMUST00000039061 Abcc9P70170 1546 aa17.92■□□□□ 0.46
Trappc11-201ENSMUST00000039061 Supt5hO55201 1082 aaKnown RBP17.88■□□□□ 0.45
Trappc11-201ENSMUST00000039061 Wdr66E9Q743 1299 aa17.81■□□□□ 0.44
Trappc11-201ENSMUST00000039061 HrcG5E8J6 738 aa17.81■□□□□ 0.44
Trappc11-201ENSMUST00000039061 Gab3Q8BSM5 595 aa17.79■□□□□ 0.44
Trappc11-201ENSMUST00000039061 Cngb1E1AZ71 1325 aa17.68■□□□□ 0.42
Trappc11-201ENSMUST00000039061 Neurod1Q60867 357 aa17.56■□□□□ 0.4
Trappc11-201ENSMUST00000039061 NefmP08553 848 aa17.53■□□□□ 0.4
Trappc11-201ENSMUST00000039061 CenpbP27790 599 aa17.42■□□□□ 0.38
Trappc11-201ENSMUST00000039061 Abcc8B2RUS7 1588 aa17.42■□□□□ 0.38
Trappc11-201ENSMUST00000039061 Dcaf1Q80TR8 1506 aa17.36■□□□□ 0.37
Trappc11-201ENSMUST00000039061 UbtfP25976 765 aaKnown RBP17.31■□□□□ 0.36
Trappc11-201ENSMUST00000039061 Ppargc1bQ8VHJ7 1014 aa17.3■□□□□ 0.36
Trappc11-201ENSMUST00000039061 Cdk11bP24788 784 aaKnown RBP17.28■□□□□ 0.36
Trappc11-201ENSMUST00000039061 Esf1Q3V1V3 845 aaKnown RBP17.25■□□□□ 0.35
Trappc11-201ENSMUST00000039061 Mier1Q5UAK0 511 aa17.21■□□□□ 0.35
Trappc11-201ENSMUST00000039061 Nop58Q6DFW4 536 aaKnown RBP17.19■□□□□ 0.34
Trappc11-201ENSMUST00000039061 Sall2Q9QX96 1004 aa17.18■□□□□ 0.34
Trappc11-201ENSMUST00000039061 Csrnp3P59055 597 aa17.16■□□□□ 0.34
Trappc11-201ENSMUST00000039061 Myt1lP97500 1187 aa17.15■□□□□ 0.34
Trappc11-201ENSMUST00000039061 Myt1Q8CFC2 1127 aa17.08■□□□□ 0.32
Trappc11-201ENSMUST00000039061 Gm35339A0A140LHH9 1649 aa17.04■□□□□ 0.32
Trappc11-201ENSMUST00000039061 Anks4bQ8K3X6 423 aa17.03■□□□□ 0.32
Trappc11-201ENSMUST00000039061 Gm38655A0A286YDK6 273 aa17.02■□□□□ 0.32
Trappc11-201ENSMUST00000039061 1700123L14RikQ3V2K7 440 aa17.01■□□□□ 0.31
Trappc11-201ENSMUST00000039061 Zcchc6Q5BLK4 1491 aaKnown RBP17■□□□□ 0.31
Trappc11-201ENSMUST00000039061 Npm2Q80W85 207 aa16.95■□□□□ 0.3
Trappc11-201ENSMUST00000039061 Pelp1Q9DBD5 1123 aaKnown RBP16.85■□□□□ 0.29
Trappc11-201ENSMUST00000039061 Cep164Q5DU05 1446 aa16.84■□□□□ 0.29
Trappc11-201ENSMUST00000039061 ClspnQ80YR7 1315 aa16.82■□□□□ 0.28
Trappc11-201ENSMUST00000039061 Chic1Q8CBW7 227 aa16.81■□□□□ 0.28
Trappc11-201ENSMUST00000039061 TonslQ6NZL6 1363 aa16.79■□□□□ 0.28
Trappc11-201ENSMUST00000039061 Aplp2Q06335 707 aa16.79■□□□□ 0.28
Trappc11-201ENSMUST00000039061 DiexfQ8BTT6 772 aaKnown RBP16.76■□□□□ 0.27
Trappc11-201ENSMUST00000039061 Slc24a1Q91WD8 1130 aa16.73■□□□□ 0.27
Trappc11-201ENSMUST00000039061 Aebp2Q9Z248 504 aaKnown RBP16.71■□□□□ 0.26
Trappc11-201ENSMUST00000039061 Tnnt3Q9QZ47 272 aa16.69■□□□□ 0.26
Trappc11-201ENSMUST00000039061 Ube2uB1AUC4 352 aa16.67■□□□□ 0.26
Trappc11-201ENSMUST00000039061 Stra8P70278 393 aa16.64■□□□□ 0.25
Trappc11-201ENSMUST00000039061 Ttbk1Q6PCN3 1308 aa16.59■□□□□ 0.25
Trappc11-201ENSMUST00000039061 Rb1cc1Q9ESK9 1588 aa16.59■□□□□ 0.25
Trappc11-201ENSMUST00000039061 Mapk8ip2Q9ERE9 830 aa16.54■□□□□ 0.24
Trappc11-201ENSMUST00000039061 Plekhg3Q4VAC9 1341 aa16.52■□□□□ 0.23
Trappc11-201ENSMUST00000039061 NclP09405 707 aaKnown RBP16.49■□□□□ 0.23
Trappc11-201ENSMUST00000039061 Ap3b1Q9Z1T1 1105 aa16.49■□□□□ 0.23
Trappc11-201ENSMUST00000039061 Eid3Q3V124 375 aa16.48■□□□□ 0.23
Trappc11-201ENSMUST00000039061 Fam71e1A1L3C1 212 aa16.42■□□□□ 0.22
Trappc11-201ENSMUST00000039061 Amer1Q7TS75 1132 aa16.41■□□□□ 0.22
Trappc11-201ENSMUST00000039061 Fam50aQ9WV03 339 aaKnown RBP16.41■□□□□ 0.22
Trappc11-201ENSMUST00000039061 Eif5bQ05D44 1216 aaKnown RBP16.4■□□□□ 0.22
Trappc11-201ENSMUST00000039061 Anp32aO35381 247 aa16.4■□□□□ 0.22
Trappc11-201ENSMUST00000039061 Rsf1E9PWW9 1441 aaKnown RBP16.36■□□□□ 0.21
Trappc11-201ENSMUST00000039061 SafbD3YXK2 937 aaKnown RBP16.33■□□□□ 0.2
Trappc11-201ENSMUST00000039061 Il27Q8K3I6 234 aa16.3■□□□□ 0.2
Trappc11-201ENSMUST00000039061 Hnrnpul2Q00PI9 745 aaKnown RBP16.27■□□□□ 0.2
Trappc11-201ENSMUST00000039061 Baz1aO88379 1555 aa16.26■□□□□ 0.19
Trappc11-201ENSMUST00000039061 Rtl5Q5DTT4 599 aa16.26■□□□□ 0.19
Trappc11-201ENSMUST00000039061 Bcl11aQ9QYE3 773 aa16.26■□□□□ 0.19
Trappc11-201ENSMUST00000039061 Brd4Q9ESU6 1400 aaKnown RBP16.24■□□□□ 0.19
Trappc11-201ENSMUST00000039061 Clip1Q922J3 1391 aa16.2■□□□□ 0.18
Trappc11-201ENSMUST00000039061 NrdcQ8BHG1 1161 aa16.16■□□□□ 0.18
Trappc11-201ENSMUST00000039061 Calr4Q3TQS0 420 aa16.15■□□□□ 0.18
Trappc11-201ENSMUST00000039061 Ccdc88bQ4QRL3 1481 aa16.13■□□□□ 0.17
Trappc11-201ENSMUST00000039061 4933416C03RikQ3V063 378 aa16.11■□□□□ 0.17
Trappc11-201ENSMUST00000039061 Ppp4r2Q0VGB7 417 aa16.08■□□□□ 0.16
Trappc11-201ENSMUST00000039061 Lmod2Q3UHZ5 550 aa16.07■□□□□ 0.16
Trappc11-201ENSMUST00000039061 Golga3P55937 1487 aa16.07■□□□□ 0.16
Trappc11-201ENSMUST00000039061 Wdr43Q6ZQL4 677 aaKnown RBP15.95■□□□□ 0.14
Trappc11-201ENSMUST00000039061 Kdm5dQ62240 1548 aa15.94■□□□□ 0.14
Trappc11-201ENSMUST00000039061 NacadQ5SWP3 1504 aa15.89■□□□□ 0.13
Trappc11-201ENSMUST00000039061 DaxxO35613 739 aa15.87■□□□□ 0.13
Trappc11-201ENSMUST00000039061 NeflP08551 543 aa15.87■□□□□ 0.13
Trappc11-201ENSMUST00000039061 P3h3Q8CG70 732 aa15.84■□□□□ 0.13
Trappc11-201ENSMUST00000039061 Mrs2Q5NCE8 434 aa15.82■□□□□ 0.12
Trappc11-201ENSMUST00000039061 Nolc1E9Q5C9 702 aaKnown RBP15.77■□□□□ 0.11
Trappc11-201ENSMUST00000039061 BlmO88700 1416 aa15.75■□□□□ 0.11
Trappc11-201ENSMUST00000039061 PrkcshO08795 521 aa15.75■□□□□ 0.11
Trappc11-201ENSMUST00000039061 Supt16hQ920B9 1047 aa15.75■□□□□ 0.11
Trappc11-201ENSMUST00000039061 Ifnlr1Q8CGK5 535 aa15.75■□□□□ 0.11
Trappc11-201ENSMUST00000039061 Setd5Q5XJV7 1441 aa15.73■□□□□ 0.11
Trappc11-201ENSMUST00000039061 Cep162Q6ZQ06 1403 aa15.73■□□□□ 0.11
Trappc11-201ENSMUST00000039061 Anp32bQ9EST5 272 aaKnown RBP15.71■□□□□ 0.1
Trappc11-201ENSMUST00000039061 Smarca2Q6DIC0 1577 aa15.7■□□□□ 0.1
Trappc11-201ENSMUST00000039061 Ccer2J3QPU5 274 aa15.67■□□□□ 0.1
Trappc11-201ENSMUST00000039061 Hspa5P20029 655 aaKnown RBP15.67■□□□□ 0.1
Trappc11-201ENSMUST00000039061 Chic2Q9D9G3 165 aa15.67■□□□□ 0.1
Trappc11-201ENSMUST00000039061 Slc4a3P16283 1227 aa15.66■□□□□ 0.1
Trappc11-201ENSMUST00000039061 Ccdc27Q3V036 639 aa15.64■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 216.9 ms