RNA–Protein interactions for RNA: ENSMUST00000035048.11

Cldn18-201, Transcript of Claudin-18, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cldn18, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18-201ENSMUST00000035048 Rhox8Q6VSS7 320 aa16.05■□□□□ 0.16
Cldn18-201ENSMUST00000035048 NischQ80TM9 1593 aa14.93□□□□□ -0.02
Cldn18-201ENSMUST00000035048 Ccdc136Q3TVA9 1136 aa14.52□□□□□ -0.09
Cldn18-201ENSMUST00000035048 Ehmt2Q9Z148 1263 aaKnown RBP14.3□□□□□ -0.12
Cldn18-201ENSMUST00000035048 Cngb1E1AZ71 1325 aa14.14□□□□□ -0.15
Cldn18-201ENSMUST00000035048 Esf1Q3V1V3 845 aaKnown RBP14.13□□□□□ -0.15
Cldn18-201ENSMUST00000035048 Abcc9P70170 1546 aa14.04□□□□□ -0.16
Cldn18-201ENSMUST00000035048 Gab3Q8BSM5 595 aa14□□□□□ -0.17
Cldn18-201ENSMUST00000035048 Trim41Q5NCC3 630 aa13.97□□□□□ -0.17
Cldn18-201ENSMUST00000035048 Rpgrip1Q9EPQ2 1331 aa13.94□□□□□ -0.18
Cldn18-201ENSMUST00000035048 Abcc8B2RUS7 1588 aa13.81□□□□□ -0.2
Cldn18-201ENSMUST00000035048 Gm35339A0A140LHH9 1649 aa13.79□□□□□ -0.2
Cldn18-201ENSMUST00000035048 Myt1lP97500 1187 aa13.68□□□□□ -0.22
Cldn18-201ENSMUST00000035048 Zeb1Q64318 1117 aa13.68□□□□□ -0.22
Cldn18-201ENSMUST00000035048 Npm2Q80W85 207 aa13.68□□□□□ -0.22
Cldn18-201ENSMUST00000035048 Zcchc6Q5BLK4 1491 aaKnown RBP13.65□□□□□ -0.23
Cldn18-201ENSMUST00000035048 Il27Q8K3I6 234 aa13.48□□□□□ -0.25
Cldn18-201ENSMUST00000035048 Pcgf6Q99NA9 353 aa13.44□□□□□ -0.26
Cldn18-201ENSMUST00000035048 Ccdc180J3QNE4 1664 aa13.41□□□□□ -0.26
Cldn18-201ENSMUST00000035048 Ube2uB1AUC4 352 aa13.4□□□□□ -0.26
Cldn18-201ENSMUST00000035048 Wdr66E9Q743 1299 aa13.39□□□□□ -0.27
Cldn18-201ENSMUST00000035048 HrcG5E8J6 738 aa13.39□□□□□ -0.27
Cldn18-201ENSMUST00000035048 UbtfP25976 765 aaKnown RBP13.35□□□□□ -0.27
Cldn18-201ENSMUST00000035048 Las1lA2BE28 776 aaKnown RBP13.28□□□□□ -0.28
Cldn18-201ENSMUST00000035048 Rtl1Q7M732 1744 aa13.26□□□□□ -0.29
Cldn18-201ENSMUST00000035048 Acin1Q9JIX8 1338 aaKnown RBP13.23□□□□□ -0.29
Cldn18-201ENSMUST00000035048 Ap3b1Q9Z1T1 1105 aa13.14□□□□□ -0.31
Cldn18-201ENSMUST00000035048 Rb1cc1Q9ESK9 1588 aa13.11□□□□□ -0.31
Cldn18-201ENSMUST00000035048 Myt1Q8CFC2 1127 aa13.1□□□□□ -0.31
Cldn18-201ENSMUST00000035048 DiexfQ8BTT6 772 aaKnown RBP13.01□□□□□ -0.33
Cldn18-201ENSMUST00000035048 Chic1Q8CBW7 227 aa12.99□□□□□ -0.33
Cldn18-201ENSMUST00000035048 NefmP08553 848 aa12.98□□□□□ -0.33
Cldn18-201ENSMUST00000035048 CenpbP27790 599 aa12.95□□□□□ -0.34
Cldn18-201ENSMUST00000035048 Dcaf1Q80TR8 1506 aa12.94□□□□□ -0.34
Cldn18-201ENSMUST00000035048 NacadQ5SWP3 1504 aa12.94□□□□□ -0.34
Cldn18-201ENSMUST00000035048 Fam50aQ9WV03 339 aaKnown RBP12.94□□□□□ -0.34
Cldn18-201ENSMUST00000035048 Npm1Q61937 292 aaKnown RBP12.91□□□□□ -0.34
Cldn18-201ENSMUST00000035048 Brd4Q9ESU6 1400 aaKnown RBP12.91□□□□□ -0.34
Cldn18-201ENSMUST00000035048 Neurod1Q60867 357 aa12.89□□□□□ -0.35
Cldn18-201ENSMUST00000035048 Ppargc1bQ8VHJ7 1014 aa12.89□□□□□ -0.35
Cldn18-201ENSMUST00000035048 Plekhg3Q4VAC9 1341 aa12.86□□□□□ -0.35
Cldn18-201ENSMUST00000035048 Lmod2Q3UHZ5 550 aa12.84□□□□□ -0.35
Cldn18-201ENSMUST00000035048 Kdm5dQ62240 1548 aa12.82□□□□□ -0.36
Cldn18-201ENSMUST00000035048 Mier1Q5UAK0 511 aa12.81□□□□□ -0.36
Cldn18-201ENSMUST00000035048 Baz1aO88379 1555 aa12.79□□□□□ -0.36
Cldn18-201ENSMUST00000035048 1700123L14RikQ3V2K7 440 aa12.76□□□□□ -0.37
Cldn18-201ENSMUST00000035048 Slc24a1Q91WD8 1130 aa12.76□□□□□ -0.37
Cldn18-201ENSMUST00000035048 Cep164Q5DU05 1446 aa12.72□□□□□ -0.37
Cldn18-201ENSMUST00000035048 Ubl4bQ9CQ84 188 aa12.72□□□□□ -0.37
Cldn18-201ENSMUST00000035048 Bcl11aQ9QYE3 773 aa12.72□□□□□ -0.37
Cldn18-201ENSMUST00000035048 Supt5hO55201 1082 aaKnown RBP12.69□□□□□ -0.38
Cldn18-201ENSMUST00000035048 NclP09405 707 aaKnown RBP12.65□□□□□ -0.38
Cldn18-201ENSMUST00000035048 Zbtb7cQ8VCZ7 619 aa12.64□□□□□ -0.39
Cldn18-201ENSMUST00000035048 Ifnlr1Q8CGK5 535 aa12.61□□□□□ -0.39
Cldn18-201ENSMUST00000035048 Clip1Q922J3 1391 aa12.6□□□□□ -0.39
Cldn18-201ENSMUST00000035048 TonslQ6NZL6 1363 aa12.6□□□□□ -0.39
Cldn18-201ENSMUST00000035048 Eid3Q3V124 375 aa12.59□□□□□ -0.39
Cldn18-201ENSMUST00000035048 Fkbp15Q6P9Q6 1216 aaKnown RBP12.58□□□□□ -0.4
Cldn18-201ENSMUST00000035048 Golga3P55937 1487 aa12.55□□□□□ -0.4
Cldn18-201ENSMUST00000035048 ScribQ80U72 1612 aa12.53□□□□□ -0.4
Cldn18-201ENSMUST00000035048 Cdk11bP24788 784 aaKnown RBP12.51□□□□□ -0.41
Cldn18-201ENSMUST00000035048 Rsf1E9PWW9 1441 aaKnown RBP12.51□□□□□ -0.41
Cldn18-201ENSMUST00000035048 Kif15Q6P9L6 1387 aa12.5□□□□□ -0.41
Cldn18-201ENSMUST00000035048 Nop58Q6DFW4 536 aaKnown RBP12.48□□□□□ -0.41
Cldn18-201ENSMUST00000035048 Csrnp3P59055 597 aa12.47□□□□□ -0.41
Cldn18-201ENSMUST00000035048 Mapk8ip2Q9ERE9 830 aa12.46□□□□□ -0.41
Cldn18-201ENSMUST00000035048 Hnrnpul2Q00PI9 745 aaKnown RBP12.46□□□□□ -0.42
Cldn18-201ENSMUST00000035048 Os9Q8K2C7 672 aa12.46□□□□□ -0.42
Cldn18-201ENSMUST00000035048 Anks4bQ8K3X6 423 aa12.45□□□□□ -0.42
Cldn18-201ENSMUST00000035048 Sycp2Q9CUU3 1500 aa12.45□□□□□ -0.42
Cldn18-201ENSMUST00000035048 Aplp2Q06335 707 aa12.43□□□□□ -0.42
Cldn18-201ENSMUST00000035048 Zbtb4Q5F293 982 aa12.41□□□□□ -0.42
Cldn18-201ENSMUST00000035048 Stra8P70278 393 aa12.4□□□□□ -0.42
Cldn18-201ENSMUST00000035048 Amer1Q7TS75 1132 aa12.4□□□□□ -0.43
Cldn18-201ENSMUST00000035048 PrkcshO08795 521 aa12.39□□□□□ -0.43
Cldn18-201ENSMUST00000035048 Ccdc88bQ4QRL3 1481 aa12.39□□□□□ -0.43
Cldn18-201ENSMUST00000035048 Cecr2E9Q2Z1 1453 aa12.39□□□□□ -0.43
Cldn18-201ENSMUST00000035048 Chic2Q9D9G3 165 aa12.38□□□□□ -0.43
Cldn18-201ENSMUST00000035048 BlmO88700 1416 aa12.36□□□□□ -0.43
Cldn18-201ENSMUST00000035048 Setd5Q5XJV7 1441 aa12.36□□□□□ -0.43
Cldn18-201ENSMUST00000035048 Ercc6F8VPZ5 1481 aa12.35□□□□□ -0.43
Cldn18-201ENSMUST00000035048 NrdcQ8BHG1 1161 aa12.35□□□□□ -0.43
Cldn18-201ENSMUST00000035048 Eif5bQ05D44 1216 aaKnown RBP12.34□□□□□ -0.43
Cldn18-201ENSMUST00000035048 Sall2Q9QX96 1004 aa12.33□□□□□ -0.44
Cldn18-201ENSMUST00000035048 Pelp1Q9DBD5 1123 aaKnown RBP12.31□□□□□ -0.44
Cldn18-201ENSMUST00000035048 Erich6D3Z6S9 713 aa12.3□□□□□ -0.44
Cldn18-201ENSMUST00000035048 ClspnQ80YR7 1315 aa12.28□□□□□ -0.44
Cldn18-201ENSMUST00000035048 Pds5bQ4VA53 1446 aaKnown RBP12.27□□□□□ -0.45
Cldn18-201ENSMUST00000035048 Anp32bQ9EST5 272 aaKnown RBP12.25□□□□□ -0.45
Cldn18-201ENSMUST00000035048 CftrP26361 1476 aa12.25□□□□□ -0.45
Cldn18-201ENSMUST00000035048 Ccdc18Q640L5 1455 aa12.24□□□□□ -0.45
Cldn18-201ENSMUST00000035048 Plppr3Q7TPB0 716 aa12.24□□□□□ -0.45
Cldn18-201ENSMUST00000035048 Smarca2Q6DIC0 1577 aa12.22□□□□□ -0.45
Cldn18-201ENSMUST00000035048 Prdm10Q3UTQ7 1184 aa12.21□□□□□ -0.45
Cldn18-201ENSMUST00000035048 Crybg2B7ZCC2 1516 aa12.21□□□□□ -0.45
Cldn18-201ENSMUST00000035048 Gm13697A2AK42 830 aa12.18□□□□□ -0.46
Cldn18-201ENSMUST00000035048 Eea1Q8BL66 1411 aa12.17□□□□□ -0.46
Cldn18-201ENSMUST00000035048 Arhgap27A2AB59 869 aa12.17□□□□□ -0.46
Cldn18-201ENSMUST00000035048 Synj1Q8CHC4 1574 aa12.17□□□□□ -0.46
Cldn18-201ENSMUST00000035048 Atp1b4Q99ME6 356 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 127 ms