RNA–Protein interactions for RNA: ENSMUST00000033264.11

Trim21-201, Transcript of E3 ubiquitin-protein ligase TRIM21, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim21, Length 2,793 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21-201ENSMUST00000033264 NischQ80TM9 1593 aa17.44■□□□□ 0.38
Trim21-201ENSMUST00000033264 Gm35339A0A140LHH9 1649 aa17.25■□□□□ 0.35
Trim21-201ENSMUST00000033264 Abcc9P70170 1546 aa16.93■□□□□ 0.3
Trim21-201ENSMUST00000033264 Abcc8B2RUS7 1588 aa16.65■□□□□ 0.26
Trim21-201ENSMUST00000033264 Rhox8Q6VSS7 320 aa15.91■□□□□ 0.14
Trim21-201ENSMUST00000033264 ScribQ80U72 1612 aa15.67■□□□□ 0.1
Trim21-201ENSMUST00000033264 Dcaf1Q80TR8 1506 aa15.45■□□□□ 0.06
Trim21-201ENSMUST00000033264 Rtl1Q7M732 1744 aa15.36■□□□□ 0.05
Trim21-201ENSMUST00000033264 Kdm5dQ62240 1548 aa15.3■□□□□ 0.04
Trim21-201ENSMUST00000033264 NacadQ5SWP3 1504 aa15.27■□□□□ 0.04
Trim21-201ENSMUST00000033264 Rb1cc1Q9ESK9 1588 aa15.26■□□□□ 0.03
Trim21-201ENSMUST00000033264 Baz1aO88379 1555 aa15.07■□□□□ 0
Trim21-201ENSMUST00000033264 Ccdc180J3QNE4 1664 aa15.06■□□□□ 0
Trim21-201ENSMUST00000033264 Zcchc6Q5BLK4 1491 aaKnown RBP15□□□□□ -0.01
Trim21-201ENSMUST00000033264 Sycp2Q9CUU3 1500 aa14.95□□□□□ -0.02
Trim21-201ENSMUST00000033264 Crybg2B7ZCC2 1516 aa14.84□□□□□ -0.03
Trim21-201ENSMUST00000033264 Ccdc136Q3TVA9 1136 aa14.81□□□□□ -0.04
Trim21-201ENSMUST00000033264 Smarca2Q6DIC0 1577 aa14.72□□□□□ -0.05
Trim21-201ENSMUST00000033264 BicraF8VPZ9 1578 aa14.66□□□□□ -0.06
Trim21-201ENSMUST00000033264 Trim41Q5NCC3 630 aa14.48□□□□□ -0.09
Trim21-201ENSMUST00000033264 Cecr2E9Q2Z1 1453 aa14.47□□□□□ -0.09
Trim21-201ENSMUST00000033264 HrcG5E8J6 738 aa14.43□□□□□ -0.1
Trim21-201ENSMUST00000033264 Brd4Q9ESU6 1400 aaKnown RBP14.34□□□□□ -0.11
Trim21-201ENSMUST00000033264 Synj1Q8CHC4 1574 aa14.27□□□□□ -0.12
Trim21-201ENSMUST00000033264 CftrP26361 1476 aa14.21□□□□□ -0.13
Trim21-201ENSMUST00000033264 Pds5bQ4VA53 1446 aaKnown RBP14.19□□□□□ -0.14
Trim21-201ENSMUST00000033264 Smarca4Q3TKT4 1613 aaKnown RBP14.18□□□□□ -0.14
Trim21-201ENSMUST00000033264 Cngb1E1AZ71 1325 aa14.17□□□□□ -0.14
Trim21-201ENSMUST00000033264 Atad2bE9Q166 1460 aaKnown RBP14.14□□□□□ -0.15
Trim21-201ENSMUST00000033264 Golga3P55937 1487 aa14.12□□□□□ -0.15
Trim21-201ENSMUST00000033264 Cttnbp2B9EJA2 1648 aa14.11□□□□□ -0.15
Trim21-201ENSMUST00000033264 Cep164Q5DU05 1446 aa14.09□□□□□ -0.15
Trim21-201ENSMUST00000033264 Esf1Q3V1V3 845 aaKnown RBP14.08□□□□□ -0.16
Trim21-201ENSMUST00000033264 Rsf1E9PWW9 1441 aaKnown RBP14.07□□□□□ -0.16
Trim21-201ENSMUST00000033264 Chic1Q8CBW7 227 aa14.06□□□□□ -0.16
Trim21-201ENSMUST00000033264 Iqgap2Q3UQ44 1575 aa14.03□□□□□ -0.16
Trim21-201ENSMUST00000033264 Ccdc88bQ4QRL3 1481 aa14.02□□□□□ -0.16
Trim21-201ENSMUST00000033264 Top2bQ64511 1612 aa13.99□□□□□ -0.17
Trim21-201ENSMUST00000033264 Ehmt2Q9Z148 1263 aaKnown RBP13.89□□□□□ -0.19
Trim21-201ENSMUST00000033264 Ercc6F8VPZ5 1481 aa13.88□□□□□ -0.19
Trim21-201ENSMUST00000033264 Gab3Q8BSM5 595 aa13.88□□□□□ -0.19
Trim21-201ENSMUST00000033264 Cc2d2aQ8CFW7 1633 aa13.87□□□□□ -0.19
Trim21-201ENSMUST00000033264 Thoc2B1AZI6 1594 aaKnown RBP13.87□□□□□ -0.19
Trim21-201ENSMUST00000033264 Frmpd1A2AKB4 1549 aa13.84□□□□□ -0.19
Trim21-201ENSMUST00000033264 Wdr62Q3U3T8 1523 aa13.84□□□□□ -0.19
Trim21-201ENSMUST00000033264 Fmn1Q05860 1466 aa13.79□□□□□ -0.2
Trim21-201ENSMUST00000033264 Dnajc5bQ9CQ94 199 aa13.7□□□□□ -0.22
Trim21-201ENSMUST00000033264 Phldb1Q6PDH0 1371 aaKnown RBP13.69□□□□□ -0.22
Trim21-201ENSMUST00000033264 Top2aQ01320 1528 aaKnown RBP13.69□□□□□ -0.22
Trim21-201ENSMUST00000033264 Acin1Q9JIX8 1338 aaKnown RBP13.67□□□□□ -0.22
Trim21-201ENSMUST00000033264 Mapk8ip2Q9ERE9 830 aa13.66□□□□□ -0.22
Trim21-201ENSMUST00000033264 Fam135aQ6NS59 1506 aa13.65□□□□□ -0.22
Trim21-201ENSMUST00000033264 TnnQ80Z71 1560 aa13.64□□□□□ -0.23
Trim21-201ENSMUST00000033264 Rpgrip1Q9EPQ2 1331 aa13.63□□□□□ -0.23
Trim21-201ENSMUST00000033264 Unc13aQ4KUS2 1712 aa13.62□□□□□ -0.23
Trim21-201ENSMUST00000033264 Rapgef2Q8CHG7 1496 aa13.6□□□□□ -0.23
Trim21-201ENSMUST00000033264 Lamc3Q9R0B6 1581 aa13.58□□□□□ -0.23
Trim21-201ENSMUST00000033264 Ubl4bQ9CQ84 188 aa13.58□□□□□ -0.24
Trim21-201ENSMUST00000033264 Kif15Q6P9L6 1387 aa13.57□□□□□ -0.24
Trim21-201ENSMUST00000033264 Cep162Q6ZQ06 1403 aa13.5□□□□□ -0.25
Trim21-201ENSMUST00000033264 Baz1bQ9Z277 1479 aa13.5□□□□□ -0.25
Trim21-201ENSMUST00000033264 Il27Q8K3I6 234 aa13.49□□□□□ -0.25
Trim21-201ENSMUST00000033264 Npm2Q80W85 207 aa13.46□□□□□ -0.26
Trim21-201ENSMUST00000033264 Camsap1A2AHC3 1581 aa13.45□□□□□ -0.26
Trim21-201ENSMUST00000033264 Myt1lP97500 1187 aa13.44□□□□□ -0.26
Trim21-201ENSMUST00000033264 PtprkP35822 1457 aa13.43□□□□□ -0.26
Trim21-201ENSMUST00000033264 Eif4g1Q6NZJ6 1600 aaKnown RBP13.41□□□□□ -0.26
Trim21-201ENSMUST00000033264 Cux2P70298 1426 aa13.41□□□□□ -0.26
Trim21-201ENSMUST00000033264 Ccdc18Q640L5 1455 aa13.38□□□□□ -0.27
Trim21-201ENSMUST00000033264 NrkQ9R0G8 1455 aa13.36□□□□□ -0.27
Trim21-201ENSMUST00000033264 Mrc2Q64449 1479 aa13.35□□□□□ -0.27
Trim21-201ENSMUST00000033264 Arhgap35Q91YM2 1499 aa13.35□□□□□ -0.27
Trim21-201ENSMUST00000033264 Grin2bQ01097 1482 aa13.34□□□□□ -0.27
Trim21-201ENSMUST00000033264 Shroom4Q1W617 1475 aa13.34□□□□□ -0.27
Trim21-201ENSMUST00000033264 Npm1Q61937 292 aaKnown RBP13.32□□□□□ -0.28
Trim21-201ENSMUST00000033264 Clip1Q922J3 1391 aa13.25□□□□□ -0.29
Trim21-201ENSMUST00000033264 LrpprcQ6PB66 1392 aaKnown RBP13.25□□□□□ -0.29
Trim21-201ENSMUST00000033264 Mier1Q5UAK0 511 aa13.24□□□□□ -0.29
Trim21-201ENSMUST00000033264 Map3k1P53349 1493 aa13.22□□□□□ -0.29
Trim21-201ENSMUST00000033264 UbtfP25976 765 aaKnown RBP13.21□□□□□ -0.29
Trim21-201ENSMUST00000033264 Mroh2bQ7M6Y6 1581 aa13.21□□□□□ -0.29
Trim21-201ENSMUST00000033264 Zeb1Q64318 1117 aa13.21□□□□□ -0.29
Trim21-201ENSMUST00000033264 PogzQ8BZH4 1409 aaKnown RBP13.21□□□□□ -0.29
Trim21-201ENSMUST00000033264 Efcab5A0JP43 1406 aa13.19□□□□□ -0.3
Trim21-201ENSMUST00000033264 Duox2A2AQ99 1517 aa13.19□□□□□ -0.3
Trim21-201ENSMUST00000033264 Plekhg3Q4VAC9 1341 aa13.16□□□□□ -0.3
Trim21-201ENSMUST00000033264 Dhx29Q6PGC1 1365 aaKnown RBP13.16□□□□□ -0.3
Trim21-201ENSMUST00000033264 Eea1Q8BL66 1411 aa13.16□□□□□ -0.3
Trim21-201ENSMUST00000033264 Arap1Q4LDD4 1452 aa13.15□□□□□ -0.3
Trim21-201ENSMUST00000033264 Kif21aQ9QXL2 1672 aa13.15□□□□□ -0.3
Trim21-201ENSMUST00000033264 Setd5Q5XJV7 1441 aa13.13□□□□□ -0.31
Trim21-201ENSMUST00000033264 Ap3b1Q9Z1T1 1105 aa13.11□□□□□ -0.31
Trim21-201ENSMUST00000033264 AqrQ8CFQ3 1481 aaKnown RBP13.11□□□□□ -0.31
Trim21-201ENSMUST00000033264 Samd9lQ69Z37 1561 aa13.1□□□□□ -0.31
Trim21-201ENSMUST00000033264 Arhgef5E9Q7D5 1581 aa13.08□□□□□ -0.32
Trim21-201ENSMUST00000033264 Ankrd26Q811D2 1581 aa13.07□□□□□ -0.32
Trim21-201ENSMUST00000033264 Carmil1Q6EDY6 1374 aa13.07□□□□□ -0.32
Trim21-201ENSMUST00000033264 Crocc2F6XLV1 1638 aa13.05□□□□□ -0.32
Trim21-201ENSMUST00000033264 Rad54l2Q99NG0 1466 aa13.05□□□□□ -0.32
Trim21-201ENSMUST00000033264 NefmP08553 848 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms