RNA–Protein interactions for RNA: ENSMUST00000031229.10

Rufy3-201, Transcript of Protein RUFY3, mousemouse

TSL 1 (best) BASIC

Gene Rufy3, Length 4,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3-201ENSMUST00000031229 Rhox8Q6VSS7 320 aa13.87□□□□□ -0.19
Rufy3-201ENSMUST00000031229 Gm35339A0A140LHH9 1649 aa13.79□□□□□ -0.2
Rufy3-201ENSMUST00000031229 NischQ80TM9 1593 aa13.68□□□□□ -0.22
Rufy3-201ENSMUST00000031229 Abcc9P70170 1546 aa13.42□□□□□ -0.26
Rufy3-201ENSMUST00000031229 Abcc8B2RUS7 1588 aa13.06□□□□□ -0.32
Rufy3-201ENSMUST00000031229 Rtl1Q7M732 1744 aa12.76□□□□□ -0.37
Rufy3-201ENSMUST00000031229 Rpgrip1Q9EPQ2 1331 aa12.73□□□□□ -0.37
Rufy3-201ENSMUST00000031229 Ehmt2Q9Z148 1263 aaKnown RBP12.66□□□□□ -0.38
Rufy3-201ENSMUST00000031229 Ccdc136Q3TVA9 1136 aa12.63□□□□□ -0.39
Rufy3-201ENSMUST00000031229 Ccdc180J3QNE4 1664 aa12.48□□□□□ -0.41
Rufy3-201ENSMUST00000031229 Dcaf1Q80TR8 1506 aa12.32□□□□□ -0.44
Rufy3-201ENSMUST00000031229 Trim41Q5NCC3 630 aa12.32□□□□□ -0.44
Rufy3-201ENSMUST00000031229 Acin1Q9JIX8 1338 aaKnown RBP12.26□□□□□ -0.45
Rufy3-201ENSMUST00000031229 NacadQ5SWP3 1504 aa12.25□□□□□ -0.45
Rufy3-201ENSMUST00000031229 ScribQ80U72 1612 aa12.23□□□□□ -0.45
Rufy3-201ENSMUST00000031229 Zcchc6Q5BLK4 1491 aaKnown RBP12.22□□□□□ -0.45
Rufy3-201ENSMUST00000031229 Cngb1E1AZ71 1325 aa12.22□□□□□ -0.45
Rufy3-201ENSMUST00000031229 HrcG5E8J6 738 aa12.2□□□□□ -0.46
Rufy3-201ENSMUST00000031229 Gab3Q8BSM5 595 aa12.16□□□□□ -0.46
Rufy3-201ENSMUST00000031229 Esf1Q3V1V3 845 aaKnown RBP12.09□□□□□ -0.47
Rufy3-201ENSMUST00000031229 Rb1cc1Q9ESK9 1588 aa12□□□□□ -0.49
Rufy3-201ENSMUST00000031229 Kdm5dQ62240 1548 aa11.98□□□□□ -0.49
Rufy3-201ENSMUST00000031229 Zeb1Q64318 1117 aa11.98□□□□□ -0.49
Rufy3-201ENSMUST00000031229 Baz1aO88379 1555 aa11.91□□□□□ -0.5
Rufy3-201ENSMUST00000031229 Pcgf6Q99NA9 353 aa11.87□□□□□ -0.51
Rufy3-201ENSMUST00000031229 Wdr66E9Q743 1299 aa11.83□□□□□ -0.52
Rufy3-201ENSMUST00000031229 Sycp2Q9CUU3 1500 aa11.83□□□□□ -0.52
Rufy3-201ENSMUST00000031229 Pds5bQ4VA53 1446 aaKnown RBP11.82□□□□□ -0.52
Rufy3-201ENSMUST00000031229 Las1lA2BE28 776 aaKnown RBP11.81□□□□□ -0.52
Rufy3-201ENSMUST00000031229 Myt1lP97500 1187 aa11.8□□□□□ -0.52
Rufy3-201ENSMUST00000031229 NefmP08553 848 aa11.77□□□□□ -0.53
Rufy3-201ENSMUST00000031229 Crybg2B7ZCC2 1516 aa11.77□□□□□ -0.53
Rufy3-201ENSMUST00000031229 Npm2Q80W85 207 aa11.76□□□□□ -0.53
Rufy3-201ENSMUST00000031229 Ubl4bQ9CQ84 188 aa11.74□□□□□ -0.53
Rufy3-201ENSMUST00000031229 Ercc6F8VPZ5 1481 aa11.74□□□□□ -0.53
Rufy3-201ENSMUST00000031229 UbtfP25976 765 aaKnown RBP11.73□□□□□ -0.53
Rufy3-201ENSMUST00000031229 Smarca2Q6DIC0 1577 aa11.7□□□□□ -0.54
Rufy3-201ENSMUST00000031229 Supt5hO55201 1082 aaKnown RBP11.68□□□□□ -0.54
Rufy3-201ENSMUST00000031229 Cep164Q5DU05 1446 aa11.61□□□□□ -0.55
Rufy3-201ENSMUST00000031229 Chic1Q8CBW7 227 aa11.59□□□□□ -0.55
Rufy3-201ENSMUST00000031229 Npm1Q61937 292 aaKnown RBP11.59□□□□□ -0.55
Rufy3-201ENSMUST00000031229 Mier1Q5UAK0 511 aa11.57□□□□□ -0.56
Rufy3-201ENSMUST00000031229 Il27Q8K3I6 234 aa11.56□□□□□ -0.56
Rufy3-201ENSMUST00000031229 Dnajc5bQ9CQ94 199 aa11.55□□□□□ -0.56
Rufy3-201ENSMUST00000031229 Atad2bE9Q166 1460 aaKnown RBP11.53□□□□□ -0.56
Rufy3-201ENSMUST00000031229 Brd4Q9ESU6 1400 aaKnown RBP11.5□□□□□ -0.57
Rufy3-201ENSMUST00000031229 Phldb1Q6PDH0 1371 aaKnown RBP11.43□□□□□ -0.58
Rufy3-201ENSMUST00000031229 Ube2uB1AUC4 352 aa11.42□□□□□ -0.58
Rufy3-201ENSMUST00000031229 Ppargc1bQ8VHJ7 1014 aa11.41□□□□□ -0.58
Rufy3-201ENSMUST00000031229 Cdk11bP24788 784 aaKnown RBP11.38□□□□□ -0.59
Rufy3-201ENSMUST00000031229 Pelp1Q9DBD5 1123 aaKnown RBP11.36□□□□□ -0.59
Rufy3-201ENSMUST00000031229 Ap3b1Q9Z1T1 1105 aa11.35□□□□□ -0.59
Rufy3-201ENSMUST00000031229 BicraF8VPZ9 1578 aa11.34□□□□□ -0.59
Rufy3-201ENSMUST00000031229 Nop58Q6DFW4 536 aaKnown RBP11.33□□□□□ -0.6
Rufy3-201ENSMUST00000031229 Rsf1E9PWW9 1441 aaKnown RBP11.33□□□□□ -0.6
Rufy3-201ENSMUST00000031229 Neurod1Q60867 357 aa11.32□□□□□ -0.6
Rufy3-201ENSMUST00000031229 Sall2Q9QX96 1004 aa11.32□□□□□ -0.6
Rufy3-201ENSMUST00000031229 TonslQ6NZL6 1363 aa11.31□□□□□ -0.6
Rufy3-201ENSMUST00000031229 Plekhg3Q4VAC9 1341 aa11.31□□□□□ -0.6
Rufy3-201ENSMUST00000031229 Golga3P55937 1487 aa11.3□□□□□ -0.6
Rufy3-201ENSMUST00000031229 Ttbk1Q6PCN3 1308 aa11.29□□□□□ -0.6
Rufy3-201ENSMUST00000031229 CenpbP27790 599 aa11.26□□□□□ -0.61
Rufy3-201ENSMUST00000031229 Kif15Q6P9L6 1387 aa11.25□□□□□ -0.61
Rufy3-201ENSMUST00000031229 Fam50aQ9WV03 339 aaKnown RBP11.24□□□□□ -0.61
Rufy3-201ENSMUST00000031229 Smarca4Q3TKT4 1613 aaKnown RBP11.23□□□□□ -0.61
Rufy3-201ENSMUST00000031229 Top2bQ64511 1612 aa11.22□□□□□ -0.61
Rufy3-201ENSMUST00000031229 Cecr2E9Q2Z1 1453 aa11.22□□□□□ -0.61
Rufy3-201ENSMUST00000031229 Synj1Q8CHC4 1574 aa11.22□□□□□ -0.61
Rufy3-201ENSMUST00000031229 ClspnQ80YR7 1315 aa11.21□□□□□ -0.61
Rufy3-201ENSMUST00000031229 Ccdc88bQ4QRL3 1481 aa11.21□□□□□ -0.62
Rufy3-201ENSMUST00000031229 Clip1Q922J3 1391 aa11.19□□□□□ -0.62
Rufy3-201ENSMUST00000031229 Iqgap2Q3UQ44 1575 aa11.17□□□□□ -0.62
Rufy3-201ENSMUST00000031229 Cttnbp2B9EJA2 1648 aa11.17□□□□□ -0.62
Rufy3-201ENSMUST00000031229 Cc2d2aQ8CFW7 1633 aa11.17□□□□□ -0.62
Rufy3-201ENSMUST00000031229 NclP09405 707 aaKnown RBP11.15□□□□□ -0.62
Rufy3-201ENSMUST00000031229 Stra8P70278 393 aa11.13□□□□□ -0.63
Rufy3-201ENSMUST00000031229 Eid3Q3V124 375 aa11.13□□□□□ -0.63
Rufy3-201ENSMUST00000031229 Slc24a1Q91WD8 1130 aa11.13□□□□□ -0.63
Rufy3-201ENSMUST00000031229 Mrc2Q64449 1479 aa11.12□□□□□ -0.63
Rufy3-201ENSMUST00000031229 CftrP26361 1476 aa11.11□□□□□ -0.63
Rufy3-201ENSMUST00000031229 Lmod2Q3UHZ5 550 aa11.11□□□□□ -0.63
Rufy3-201ENSMUST00000031229 Anks4bQ8K3X6 423 aa11.1□□□□□ -0.63
Rufy3-201ENSMUST00000031229 Cux2P70298 1426 aa11.09□□□□□ -0.63
Rufy3-201ENSMUST00000031229 Baz1bQ9Z277 1479 aa11.08□□□□□ -0.64
Rufy3-201ENSMUST00000031229 Aebp2Q9Z248 504 aaKnown RBP11.08□□□□□ -0.64
Rufy3-201ENSMUST00000031229 Gm38655A0A286YDK6 273 aa11.08□□□□□ -0.64
Rufy3-201ENSMUST00000031229 Pabpn1Q8CCS6 302 aaKnown RBP11.08□□□□□ -0.64
Rufy3-201ENSMUST00000031229 Ccdc18Q640L5 1455 aa11.06□□□□□ -0.64
Rufy3-201ENSMUST00000031229 Csrnp3P59055 597 aa11.06□□□□□ -0.64
Rufy3-201ENSMUST00000031229 Tnnt3Q9QZ47 272 aa11.04□□□□□ -0.64
Rufy3-201ENSMUST00000031229 Frmpd1A2AKB4 1549 aa11.03□□□□□ -0.64
Rufy3-201ENSMUST00000031229 Thoc2B1AZI6 1594 aaKnown RBP11.02□□□□□ -0.64
Rufy3-201ENSMUST00000031229 Mapk8ip2Q9ERE9 830 aa11.01□□□□□ -0.65
Rufy3-201ENSMUST00000031229 Ifnlr1Q8CGK5 535 aa10.99□□□□□ -0.65
Rufy3-201ENSMUST00000031229 Wdr62Q3U3T8 1523 aa10.97□□□□□ -0.65
Rufy3-201ENSMUST00000031229 Fam135aQ6NS59 1506 aa10.95□□□□□ -0.66
Rufy3-201ENSMUST00000031229 Setd5Q5XJV7 1441 aa10.95□□□□□ -0.66
Rufy3-201ENSMUST00000031229 Cep162Q6ZQ06 1403 aa10.95□□□□□ -0.66
Rufy3-201ENSMUST00000031229 Fmn1Q05860 1466 aa10.93□□□□□ -0.66
Rufy3-201ENSMUST00000031229 BlmO88700 1416 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 83.3 ms