RNA–Protein interactions for RNA: ENSMUST00000030336.10

Tnfrsf1b-201, Transcript of Tumor necrosis factor receptor superfamily member 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tnfrsf1b, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1b-201ENSMUST00000030336 NischQ80TM9 1593 aa16.97■□□□□ 0.31
Tnfrsf1b-201ENSMUST00000030336 Gm35339A0A140LHH9 1649 aa16.54■□□□□ 0.24
Tnfrsf1b-201ENSMUST00000030336 Abcc9P70170 1546 aa16.33■□□□□ 0.2
Tnfrsf1b-201ENSMUST00000030336 Abcc8B2RUS7 1588 aa16.14■□□□□ 0.17
Tnfrsf1b-201ENSMUST00000030336 Rhox8Q6VSS7 320 aa15.9■□□□□ 0.14
Tnfrsf1b-201ENSMUST00000030336 Ehmt2Q9Z148 1263 aaKnown RBP15.4■□□□□ 0.06
Tnfrsf1b-201ENSMUST00000030336 Rpgrip1Q9EPQ2 1331 aa15.31■□□□□ 0.04
Tnfrsf1b-201ENSMUST00000030336 ScribQ80U72 1612 aa15.23■□□□□ 0.03
Tnfrsf1b-201ENSMUST00000030336 Ccdc180J3QNE4 1664 aa15.21■□□□□ 0.03
Tnfrsf1b-201ENSMUST00000030336 Rtl1Q7M732 1744 aa15.2■□□□□ 0.02
Tnfrsf1b-201ENSMUST00000030336 Acin1Q9JIX8 1338 aaKnown RBP15.14■□□□□ 0.01
Tnfrsf1b-201ENSMUST00000030336 Kdm5dQ62240 1548 aa14.95□□□□□ -0.02
Tnfrsf1b-201ENSMUST00000030336 Pcgf6Q99NA9 353 aa14.95□□□□□ -0.02
Tnfrsf1b-201ENSMUST00000030336 Zcchc6Q5BLK4 1491 aaKnown RBP14.91□□□□□ -0.02
Tnfrsf1b-201ENSMUST00000030336 NacadQ5SWP3 1504 aa14.89□□□□□ -0.03
Tnfrsf1b-201ENSMUST00000030336 Rb1cc1Q9ESK9 1588 aa14.85□□□□□ -0.03
Tnfrsf1b-201ENSMUST00000030336 Dcaf1Q80TR8 1506 aa14.81□□□□□ -0.04
Tnfrsf1b-201ENSMUST00000030336 Ccdc136Q3TVA9 1136 aa14.77□□□□□ -0.05
Tnfrsf1b-201ENSMUST00000030336 Supt5hO55201 1082 aaKnown RBP14.66□□□□□ -0.06
Tnfrsf1b-201ENSMUST00000030336 HrcG5E8J6 738 aa14.61□□□□□ -0.07
Tnfrsf1b-201ENSMUST00000030336 Baz1aO88379 1555 aa14.6□□□□□ -0.07
Tnfrsf1b-201ENSMUST00000030336 Sycp2Q9CUU3 1500 aa14.55□□□□□ -0.08
Tnfrsf1b-201ENSMUST00000030336 Trim41Q5NCC3 630 aa14.48□□□□□ -0.09
Tnfrsf1b-201ENSMUST00000030336 Neurod1Q60867 357 aa14.46□□□□□ -0.1
Tnfrsf1b-201ENSMUST00000030336 Zeb1Q64318 1117 aa14.37□□□□□ -0.11
Tnfrsf1b-201ENSMUST00000030336 Crybg2B7ZCC2 1516 aa14.25□□□□□ -0.13
Tnfrsf1b-201ENSMUST00000030336 BicraF8VPZ9 1578 aa14.24□□□□□ -0.13
Tnfrsf1b-201ENSMUST00000030336 Gab3Q8BSM5 595 aa14.2□□□□□ -0.14
Tnfrsf1b-201ENSMUST00000030336 Esf1Q3V1V3 845 aaKnown RBP14.19□□□□□ -0.14
Tnfrsf1b-201ENSMUST00000030336 Cngb1E1AZ71 1325 aa14.16□□□□□ -0.14
Tnfrsf1b-201ENSMUST00000030336 Smarca2Q6DIC0 1577 aa14.16□□□□□ -0.14
Tnfrsf1b-201ENSMUST00000030336 Sall2Q9QX96 1004 aa14.13□□□□□ -0.15
Tnfrsf1b-201ENSMUST00000030336 Cecr2E9Q2Z1 1453 aa14.12□□□□□ -0.15
Tnfrsf1b-201ENSMUST00000030336 Mier1Q5UAK0 511 aa14.06□□□□□ -0.16
Tnfrsf1b-201ENSMUST00000030336 Chic1Q8CBW7 227 aa14.06□□□□□ -0.16
Tnfrsf1b-201ENSMUST00000030336 Cep164Q5DU05 1446 aa14.05□□□□□ -0.16
Tnfrsf1b-201ENSMUST00000030336 Csrnp3P59055 597 aa14.03□□□□□ -0.16
Tnfrsf1b-201ENSMUST00000030336 1700123L14RikQ3V2K7 440 aa14.02□□□□□ -0.17
Tnfrsf1b-201ENSMUST00000030336 Brd4Q9ESU6 1400 aaKnown RBP14□□□□□ -0.17
Tnfrsf1b-201ENSMUST00000030336 Ppargc1bQ8VHJ7 1014 aa14□□□□□ -0.17
Tnfrsf1b-201ENSMUST00000030336 Las1lA2BE28 776 aaKnown RBP13.92□□□□□ -0.18
Tnfrsf1b-201ENSMUST00000030336 NefmP08553 848 aa13.9□□□□□ -0.18
Tnfrsf1b-201ENSMUST00000030336 Rsf1E9PWW9 1441 aaKnown RBP13.9□□□□□ -0.18
Tnfrsf1b-201ENSMUST00000030336 Wdr66E9Q743 1299 aa13.88□□□□□ -0.19
Tnfrsf1b-201ENSMUST00000030336 Aebp2Q9Z248 504 aaKnown RBP13.88□□□□□ -0.19
Tnfrsf1b-201ENSMUST00000030336 Smarca4Q3TKT4 1613 aaKnown RBP13.87□□□□□ -0.19
Tnfrsf1b-201ENSMUST00000030336 Gm38655A0A286YDK6 273 aa13.87□□□□□ -0.19
Tnfrsf1b-201ENSMUST00000030336 Synj1Q8CHC4 1574 aa13.86□□□□□ -0.19
Tnfrsf1b-201ENSMUST00000030336 Pds5bQ4VA53 1446 aaKnown RBP13.86□□□□□ -0.19
Tnfrsf1b-201ENSMUST00000030336 Anks4bQ8K3X6 423 aa13.84□□□□□ -0.19
Tnfrsf1b-201ENSMUST00000030336 CftrP26361 1476 aa13.82□□□□□ -0.2
Tnfrsf1b-201ENSMUST00000030336 Atad2bE9Q166 1460 aaKnown RBP13.8□□□□□ -0.2
Tnfrsf1b-201ENSMUST00000030336 UbtfP25976 765 aaKnown RBP13.79□□□□□ -0.2
Tnfrsf1b-201ENSMUST00000030336 Ccdc88bQ4QRL3 1481 aa13.76□□□□□ -0.21
Tnfrsf1b-201ENSMUST00000030336 Iqgap2Q3UQ44 1575 aa13.75□□□□□ -0.21
Tnfrsf1b-201ENSMUST00000030336 Cttnbp2B9EJA2 1648 aa13.71□□□□□ -0.22
Tnfrsf1b-201ENSMUST00000030336 Golga3P55937 1487 aa13.7□□□□□ -0.22
Tnfrsf1b-201ENSMUST00000030336 Ercc6F8VPZ5 1481 aa13.69□□□□□ -0.22
Tnfrsf1b-201ENSMUST00000030336 Nop58Q6DFW4 536 aaKnown RBP13.68□□□□□ -0.22
Tnfrsf1b-201ENSMUST00000030336 Cdk11bP24788 784 aaKnown RBP13.68□□□□□ -0.22
Tnfrsf1b-201ENSMUST00000030336 Il27Q8K3I6 234 aa13.67□□□□□ -0.22
Tnfrsf1b-201ENSMUST00000030336 Ubl4bQ9CQ84 188 aa13.57□□□□□ -0.24
Tnfrsf1b-201ENSMUST00000030336 ClspnQ80YR7 1315 aa13.56□□□□□ -0.24
Tnfrsf1b-201ENSMUST00000030336 CenpbP27790 599 aa13.54□□□□□ -0.24
Tnfrsf1b-201ENSMUST00000030336 Aplp2Q06335 707 aa13.54□□□□□ -0.24
Tnfrsf1b-201ENSMUST00000030336 Frmpd1A2AKB4 1549 aa13.54□□□□□ -0.24
Tnfrsf1b-201ENSMUST00000030336 Myt1lP97500 1187 aa13.53□□□□□ -0.24
Tnfrsf1b-201ENSMUST00000030336 Npm2Q80W85 207 aa13.5□□□□□ -0.25
Tnfrsf1b-201ENSMUST00000030336 Dnajc5bQ9CQ94 199 aa13.5□□□□□ -0.25
Tnfrsf1b-201ENSMUST00000030336 Wdr62Q3U3T8 1523 aa13.49□□□□□ -0.25
Tnfrsf1b-201ENSMUST00000030336 Kif15Q6P9L6 1387 aa13.49□□□□□ -0.25
Tnfrsf1b-201ENSMUST00000030336 Mapk8ip2Q9ERE9 830 aa13.45□□□□□ -0.26
Tnfrsf1b-201ENSMUST00000030336 Cc2d2aQ8CFW7 1633 aa13.44□□□□□ -0.26
Tnfrsf1b-201ENSMUST00000030336 SafbD3YXK2 937 aaKnown RBP13.44□□□□□ -0.26
Tnfrsf1b-201ENSMUST00000030336 TonslQ6NZL6 1363 aa13.44□□□□□ -0.26
Tnfrsf1b-201ENSMUST00000030336 Phldb1Q6PDH0 1371 aaKnown RBP13.42□□□□□ -0.26
Tnfrsf1b-201ENSMUST00000030336 Npm1Q61937 292 aaKnown RBP13.41□□□□□ -0.26
Tnfrsf1b-201ENSMUST00000030336 Plekhg3Q4VAC9 1341 aa13.4□□□□□ -0.26
Tnfrsf1b-201ENSMUST00000030336 Top2bQ64511 1612 aa13.4□□□□□ -0.26
Tnfrsf1b-201ENSMUST00000030336 Ap3b1Q9Z1T1 1105 aa13.39□□□□□ -0.27
Tnfrsf1b-201ENSMUST00000030336 Fmn1Q05860 1466 aa13.38□□□□□ -0.27
Tnfrsf1b-201ENSMUST00000030336 Hnrnpul2Q00PI9 745 aaKnown RBP13.37□□□□□ -0.27
Tnfrsf1b-201ENSMUST00000030336 Thoc2B1AZI6 1594 aaKnown RBP13.36□□□□□ -0.27
Tnfrsf1b-201ENSMUST00000030336 Eid3Q3V124 375 aa13.36□□□□□ -0.27
Tnfrsf1b-201ENSMUST00000030336 Fam71e1A1L3C1 212 aa13.34□□□□□ -0.27
Tnfrsf1b-201ENSMUST00000030336 Cux2P70298 1426 aa13.29□□□□□ -0.28
Tnfrsf1b-201ENSMUST00000030336 Myt1Q8CFC2 1127 aa13.25□□□□□ -0.29
Tnfrsf1b-201ENSMUST00000030336 Unc13aQ4KUS2 1712 aa13.24□□□□□ -0.29
Tnfrsf1b-201ENSMUST00000030336 Ccdc18Q640L5 1455 aa13.24□□□□□ -0.29
Tnfrsf1b-201ENSMUST00000030336 Rapgef2Q8CHG7 1496 aa13.21□□□□□ -0.29
Tnfrsf1b-201ENSMUST00000030336 Cep162Q6ZQ06 1403 aa13.19□□□□□ -0.3
Tnfrsf1b-201ENSMUST00000030336 Fam135aQ6NS59 1506 aa13.18□□□□□ -0.3
Tnfrsf1b-201ENSMUST00000030336 Lamc3Q9R0B6 1581 aa13.18□□□□□ -0.3
Tnfrsf1b-201ENSMUST00000030336 Clip1Q922J3 1391 aa13.17□□□□□ -0.3
Tnfrsf1b-201ENSMUST00000030336 DiexfQ8BTT6 772 aaKnown RBP13.17□□□□□ -0.3
Tnfrsf1b-201ENSMUST00000030336 Top2aQ01320 1528 aaKnown RBP13.16□□□□□ -0.3
Tnfrsf1b-201ENSMUST00000030336 Bcl11aQ9QYE3 773 aa13.15□□□□□ -0.3
Tnfrsf1b-201ENSMUST00000030336 Ifnlr1Q8CGK5 535 aa13.12□□□□□ -0.31
Tnfrsf1b-201ENSMUST00000030336 TnnQ80Z71 1560 aa13.1□□□□□ -0.31
Tnfrsf1b-201ENSMUST00000030336 Camsap1A2AHC3 1581 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms