RNA–Protein interactions for RNA: ENSMUST00000028900.10

Vps16-201, Transcript of Vacuolar protein sorting-associated protein 16 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps16, Length 3,161 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps16-201ENSMUST00000028900 NischQ80TM9 1593 aa20.45■□□□□ 0.86
Vps16-201ENSMUST00000028900 Rpgrip1Q9EPQ2 1331 aa20.37■□□□□ 0.85
Vps16-201ENSMUST00000028900 Rtl1Q7M732 1744 aa20.26■□□□□ 0.83
Vps16-201ENSMUST00000028900 Ccdc180J3QNE4 1664 aa19.98■□□□□ 0.79
Vps16-201ENSMUST00000028900 Abcc9P70170 1546 aa19.95■□□□□ 0.78
Vps16-201ENSMUST00000028900 Gm35339A0A140LHH9 1649 aa19.89■□□□□ 0.77
Vps16-201ENSMUST00000028900 Acin1Q9JIX8 1338 aaKnown RBP19.55■□□□□ 0.72
Vps16-201ENSMUST00000028900 Rhox8Q6VSS7 320 aa19.45■□□□□ 0.7
Vps16-201ENSMUST00000028900 Abcc8B2RUS7 1588 aa19.25■□□□□ 0.67
Vps16-201ENSMUST00000028900 Zcchc6Q5BLK4 1491 aaKnown RBP19.18■□□□□ 0.66
Vps16-201ENSMUST00000028900 Pcgf6Q99NA9 353 aa19.11■□□□□ 0.65
Vps16-201ENSMUST00000028900 Dcaf1Q80TR8 1506 aa19.07■□□□□ 0.64
Vps16-201ENSMUST00000028900 HrcG5E8J6 738 aa18.88■□□□□ 0.61
Vps16-201ENSMUST00000028900 Trim41Q5NCC3 630 aa18.71■□□□□ 0.59
Vps16-201ENSMUST00000028900 Ehmt2Q9Z148 1263 aaKnown RBP18.61■□□□□ 0.57
Vps16-201ENSMUST00000028900 Supt5hO55201 1082 aaKnown RBP18.47■□□□□ 0.55
Vps16-201ENSMUST00000028900 Las1lA2BE28 776 aaKnown RBP18.44■□□□□ 0.54
Vps16-201ENSMUST00000028900 Neurod1Q60867 357 aa18.4■□□□□ 0.54
Vps16-201ENSMUST00000028900 Myt1Q8CFC2 1127 aa18.16■□□□□ 0.5
Vps16-201ENSMUST00000028900 Cep164Q5DU05 1446 aa18.06■□□□□ 0.48
Vps16-201ENSMUST00000028900 Anks4bQ8K3X6 423 aa18.03■□□□□ 0.48
Vps16-201ENSMUST00000028900 NefmP08553 848 aa18.01■□□□□ 0.47
Vps16-201ENSMUST00000028900 1700123L14RikQ3V2K7 440 aa17.98■□□□□ 0.47
Vps16-201ENSMUST00000028900 Rb1cc1Q9ESK9 1588 aa17.96■□□□□ 0.47
Vps16-201ENSMUST00000028900 Cngb1E1AZ71 1325 aa17.95■□□□□ 0.46
Vps16-201ENSMUST00000028900 Ccdc136Q3TVA9 1136 aa17.93■□□□□ 0.46
Vps16-201ENSMUST00000028900 CenpbP27790 599 aa17.9■□□□□ 0.46
Vps16-201ENSMUST00000028900 Baz1aO88379 1555 aa17.83■□□□□ 0.44
Vps16-201ENSMUST00000028900 Zeb1Q64318 1117 aa17.82■□□□□ 0.44
Vps16-201ENSMUST00000028900 Sall2Q9QX96 1004 aa17.81■□□□□ 0.44
Vps16-201ENSMUST00000028900 Aplp2Q06335 707 aa17.79■□□□□ 0.44
Vps16-201ENSMUST00000028900 Csrnp3P59055 597 aa17.76■□□□□ 0.43
Vps16-201ENSMUST00000028900 Mier1Q5UAK0 511 aa17.65■□□□□ 0.42
Vps16-201ENSMUST00000028900 ScribQ80U72 1612 aa17.53■□□□□ 0.4
Vps16-201ENSMUST00000028900 Cdk11bP24788 784 aaKnown RBP17.53■□□□□ 0.4
Vps16-201ENSMUST00000028900 Smarca2Q6DIC0 1577 aa17.51■□□□□ 0.39
Vps16-201ENSMUST00000028900 Crybg2B7ZCC2 1516 aa17.47■□□□□ 0.39
Vps16-201ENSMUST00000028900 Nop58Q6DFW4 536 aaKnown RBP17.44■□□□□ 0.38
Vps16-201ENSMUST00000028900 Rsf1E9PWW9 1441 aaKnown RBP17.44■□□□□ 0.38
Vps16-201ENSMUST00000028900 ClspnQ80YR7 1315 aa17.44■□□□□ 0.38
Vps16-201ENSMUST00000028900 DiexfQ8BTT6 772 aaKnown RBP17.37■□□□□ 0.37
Vps16-201ENSMUST00000028900 Kdm5dQ62240 1548 aa17.36■□□□□ 0.37
Vps16-201ENSMUST00000028900 Aebp2Q9Z248 504 aaKnown RBP17.32■□□□□ 0.36
Vps16-201ENSMUST00000028900 Chic1Q8CBW7 227 aa17.32■□□□□ 0.36
Vps16-201ENSMUST00000028900 Wdr66E9Q743 1299 aa17.29■□□□□ 0.36
Vps16-201ENSMUST00000028900 Gab3Q8BSM5 595 aa17.23■□□□□ 0.35
Vps16-201ENSMUST00000028900 Ccdc88bQ4QRL3 1481 aa17.19■□□□□ 0.34
Vps16-201ENSMUST00000028900 Bcl11aQ9QYE3 773 aa17.18■□□□□ 0.34
Vps16-201ENSMUST00000028900 NacadQ5SWP3 1504 aa17.18■□□□□ 0.34
Vps16-201ENSMUST00000028900 Golga3P55937 1487 aa17.15■□□□□ 0.34
Vps16-201ENSMUST00000028900 Brd4Q9ESU6 1400 aaKnown RBP17.11■□□□□ 0.33
Vps16-201ENSMUST00000028900 Tnnt3Q9QZ47 272 aa17.09■□□□□ 0.33
Vps16-201ENSMUST00000028900 TonslQ6NZL6 1363 aa17.04■□□□□ 0.32
Vps16-201ENSMUST00000028900 Gm38655A0A286YDK6 273 aa17.03■□□□□ 0.32
Vps16-201ENSMUST00000028900 Fam71e1A1L3C1 212 aa17.01■□□□□ 0.31
Vps16-201ENSMUST00000028900 UbtfP25976 765 aaKnown RBP16.98■□□□□ 0.31
Vps16-201ENSMUST00000028900 Rapgef2Q8CHG7 1496 aa16.91■□□□□ 0.3
Vps16-201ENSMUST00000028900 Top2bQ64511 1612 aa16.91■□□□□ 0.3
Vps16-201ENSMUST00000028900 Rtl5Q5DTT4 599 aa16.87■□□□□ 0.29
Vps16-201ENSMUST00000028900 Hnrnpul2Q00PI9 745 aaKnown RBP16.87■□□□□ 0.29
Vps16-201ENSMUST00000028900 Ppargc1bQ8VHJ7 1014 aa16.84■□□□□ 0.29
Vps16-201ENSMUST00000028900 Synj1Q8CHC4 1574 aa16.83■□□□□ 0.28
Vps16-201ENSMUST00000028900 Anp32aO35381 247 aa16.8■□□□□ 0.28
Vps16-201ENSMUST00000028900 SafbD3YXK2 937 aaKnown RBP16.79■□□□□ 0.28
Vps16-201ENSMUST00000028900 Ncapd3Q6ZQK0 1506 aa16.78■□□□□ 0.28
Vps16-201ENSMUST00000028900 Sycp2Q9CUU3 1500 aa16.77■□□□□ 0.27
Vps16-201ENSMUST00000028900 Cecr2E9Q2Z1 1453 aa16.75■□□□□ 0.27
Vps16-201ENSMUST00000028900 Mapk8ip2Q9ERE9 830 aa16.74■□□□□ 0.27
Vps16-201ENSMUST00000028900 Cep162Q6ZQ06 1403 aa16.71■□□□□ 0.27
Vps16-201ENSMUST00000028900 Stra8P70278 393 aa16.68■□□□□ 0.26
Vps16-201ENSMUST00000028900 CftrP26361 1476 aa16.67■□□□□ 0.26
Vps16-201ENSMUST00000028900 Znf710Q3U288 666 aa16.65■□□□□ 0.26
Vps16-201ENSMUST00000028900 Top2aQ01320 1528 aaKnown RBP16.65■□□□□ 0.26
Vps16-201ENSMUST00000028900 Pelp1Q9DBD5 1123 aaKnown RBP16.64■□□□□ 0.25
Vps16-201ENSMUST00000028900 Cc2d2aQ8CFW7 1633 aa16.61■□□□□ 0.25
Vps16-201ENSMUST00000028900 Kdm5bQ80Y84 1544 aa16.61■□□□□ 0.25
Vps16-201ENSMUST00000028900 PrkcshO08795 521 aa16.59■□□□□ 0.25
Vps16-201ENSMUST00000028900 Cttnbp2B9EJA2 1648 aa16.58■□□□□ 0.25
Vps16-201ENSMUST00000028900 Fmn1Q05860 1466 aa16.58■□□□□ 0.25
Vps16-201ENSMUST00000028900 Eif4g1Q6NZJ6 1600 aaKnown RBP16.57■□□□□ 0.24
Vps16-201ENSMUST00000028900 Clip1Q922J3 1391 aa16.54■□□□□ 0.24
Vps16-201ENSMUST00000028900 Rpap1Q80TE0 1409 aa16.54■□□□□ 0.24
Vps16-201ENSMUST00000028900 Ifnlr1Q8CGK5 535 aa16.53■□□□□ 0.24
Vps16-201ENSMUST00000028900 Esf1Q3V1V3 845 aaKnown RBP16.52■□□□□ 0.24
Vps16-201ENSMUST00000028900 Ap3b1Q9Z1T1 1105 aa16.52■□□□□ 0.24
Vps16-201ENSMUST00000028900 Nolc1E9Q5C9 702 aaKnown RBP16.47■□□□□ 0.23
Vps16-201ENSMUST00000028900 Calr4Q3TQS0 420 aa16.46■□□□□ 0.23
Vps16-201ENSMUST00000028900 TchhA0A0B4J1F9 1599 aa16.46■□□□□ 0.23
Vps16-201ENSMUST00000028900 Myt1lP97500 1187 aa16.43■□□□□ 0.22
Vps16-201ENSMUST00000028900 Plekhg3Q4VAC9 1341 aa16.42■□□□□ 0.22
Vps16-201ENSMUST00000028900 Supt16hQ920B9 1047 aa16.42■□□□□ 0.22
Vps16-201ENSMUST00000028900 UacaQ8CGB3 1411 aa16.37■□□□□ 0.21
Vps16-201ENSMUST00000028900 Ccdc18Q640L5 1455 aa16.37■□□□□ 0.21
Vps16-201ENSMUST00000028900 Washc2Q6PGL7 1334 aa16.37■□□□□ 0.21
Vps16-201ENSMUST00000028900 Baz1bQ9Z277 1479 aa16.36■□□□□ 0.21
Vps16-201ENSMUST00000028900 Amer1Q7TS75 1132 aa16.34■□□□□ 0.21
Vps16-201ENSMUST00000028900 Eid3Q3V124 375 aa16.32■□□□□ 0.2
Vps16-201ENSMUST00000028900 Gm13697A2AK42 830 aa16.3■□□□□ 0.2
Vps16-201ENSMUST00000028900 Arhgef5E9Q7D5 1581 aa16.29■□□□□ 0.2
Vps16-201ENSMUST00000028900 Eea1Q8BL66 1411 aa16.28■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 110.2 ms