RNA–Protein interactions for RNA: ENSMUST00000028841.13

Usp8-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp8, Length 4,145 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8-201ENSMUST00000028841 Gm35339A0A140LHH9 1649 aa17.65■□□□□ 0.42
Usp8-201ENSMUST00000028841 NischQ80TM9 1593 aa16.62■□□□□ 0.25
Usp8-201ENSMUST00000028841 Abcc8B2RUS7 1588 aa16.36■□□□□ 0.21
Usp8-201ENSMUST00000028841 Abcc9P70170 1546 aa16.31■□□□□ 0.2
Usp8-201ENSMUST00000028841 ScribQ80U72 1612 aa16.15■□□□□ 0.18
Usp8-201ENSMUST00000028841 Kdm5dQ62240 1548 aa15.26■□□□□ 0.03
Usp8-201ENSMUST00000028841 Dcaf1Q80TR8 1506 aa15.2■□□□□ 0.02
Usp8-201ENSMUST00000028841 NacadQ5SWP3 1504 aa15.16■□□□□ 0.02
Usp8-201ENSMUST00000028841 BicraF8VPZ9 1578 aa15.07■□□□□ 0
Usp8-201ENSMUST00000028841 Sycp2Q9CUU3 1500 aa15□□□□□ -0.01
Usp8-201ENSMUST00000028841 Ccdc180J3QNE4 1664 aa14.74□□□□□ -0.05
Usp8-201ENSMUST00000028841 Thoc2B1AZI6 1594 aaKnown RBP14.64□□□□□ -0.07
Usp8-201ENSMUST00000028841 Dnajc5bQ9CQ94 199 aa14.47□□□□□ -0.09
Usp8-201ENSMUST00000028841 Rb1cc1Q9ESK9 1588 aa14.46□□□□□ -0.09
Usp8-201ENSMUST00000028841 Crybg2B7ZCC2 1516 aa14.43□□□□□ -0.1
Usp8-201ENSMUST00000028841 Baz1aO88379 1555 aa14.3□□□□□ -0.12
Usp8-201ENSMUST00000028841 Unc13aQ4KUS2 1712 aa14.14□□□□□ -0.15
Usp8-201ENSMUST00000028841 Fam135aQ6NS59 1506 aa14.13□□□□□ -0.15
Usp8-201ENSMUST00000028841 Pds5bQ4VA53 1446 aaKnown RBP14.11□□□□□ -0.15
Usp8-201ENSMUST00000028841 Cc2d2aQ8CFW7 1633 aa14.08□□□□□ -0.15
Usp8-201ENSMUST00000028841 Atad2bE9Q166 1460 aaKnown RBP14.06□□□□□ -0.16
Usp8-201ENSMUST00000028841 Smarca2Q6DIC0 1577 aa14.02□□□□□ -0.17
Usp8-201ENSMUST00000028841 Smarca4Q3TKT4 1613 aaKnown RBP14□□□□□ -0.17
Usp8-201ENSMUST00000028841 Wdr62Q3U3T8 1523 aa13.96□□□□□ -0.18
Usp8-201ENSMUST00000028841 Iqgap2Q3UQ44 1575 aa13.94□□□□□ -0.18
Usp8-201ENSMUST00000028841 Baz1bQ9Z277 1479 aa13.89□□□□□ -0.19
Usp8-201ENSMUST00000028841 Cecr2E9Q2Z1 1453 aa13.88□□□□□ -0.19
Usp8-201ENSMUST00000028841 Frmpd1A2AKB4 1549 aa13.85□□□□□ -0.19
Usp8-201ENSMUST00000028841 Ercc6F8VPZ5 1481 aa13.65□□□□□ -0.22
Usp8-201ENSMUST00000028841 Zcchc6Q5BLK4 1491 aaKnown RBP13.58□□□□□ -0.24
Usp8-201ENSMUST00000028841 Cttnbp2B9EJA2 1648 aa13.57□□□□□ -0.24
Usp8-201ENSMUST00000028841 Rtl1Q7M732 1744 aa13.55□□□□□ -0.24
Usp8-201ENSMUST00000028841 Synj1Q8CHC4 1574 aa13.51□□□□□ -0.25
Usp8-201ENSMUST00000028841 Phldb1Q6PDH0 1371 aaKnown RBP13.5□□□□□ -0.25
Usp8-201ENSMUST00000028841 CftrP26361 1476 aa13.46□□□□□ -0.26
Usp8-201ENSMUST00000028841 Lrriq1Q0P5X1 1673 aa13.45□□□□□ -0.26
Usp8-201ENSMUST00000028841 Mrc2Q64449 1479 aa13.43□□□□□ -0.26
Usp8-201ENSMUST00000028841 Kif21aQ9QXL2 1672 aa13.34□□□□□ -0.27
Usp8-201ENSMUST00000028841 Lamc3Q9R0B6 1581 aa13.29□□□□□ -0.28
Usp8-201ENSMUST00000028841 TnnQ80Z71 1560 aa13.28□□□□□ -0.28
Usp8-201ENSMUST00000028841 Eif4g3Q80XI3 1579 aaKnown RBP13.26□□□□□ -0.29
Usp8-201ENSMUST00000028841 Top2bQ64511 1612 aa13.16□□□□□ -0.3
Usp8-201ENSMUST00000028841 Setd1bQ8CFT2 1985 aa13.14□□□□□ -0.31
Usp8-201ENSMUST00000028841 Shroom2A2ALU4 1481 aa13.13□□□□□ -0.31
Usp8-201ENSMUST00000028841 Gpatch8A2A6A1 1505 aa13.11□□□□□ -0.31
Usp8-201ENSMUST00000028841 Dnajc5P60904 198 aa13.11□□□□□ -0.31
Usp8-201ENSMUST00000028841 Rsf1E9PWW9 1441 aaKnown RBP13.06□□□□□ -0.32
Usp8-201ENSMUST00000028841 Brd4Q9ESU6 1400 aaKnown RBP13.05□□□□□ -0.32
Usp8-201ENSMUST00000028841 Urb2E9Q7L1 1524 aaKnown RBP12.98□□□□□ -0.33
Usp8-201ENSMUST00000028841 Ubl4bQ9CQ84 188 aa12.97□□□□□ -0.33
Usp8-201ENSMUST00000028841 Col17a1Q07563 1470 aa12.96□□□□□ -0.33
Usp8-201ENSMUST00000028841 Cux2P70298 1426 aa12.94□□□□□ -0.34
Usp8-201ENSMUST00000028841 Camsap1A2AHC3 1581 aa12.94□□□□□ -0.34
Usp8-201ENSMUST00000028841 Rhox8Q6VSS7 320 aa12.9□□□□□ -0.34
Usp8-201ENSMUST00000028841 Rusc2Q80U22 1514 aa12.88□□□□□ -0.35
Usp8-201ENSMUST00000028841 Crocc2F6XLV1 1638 aa12.85□□□□□ -0.35
Usp8-201ENSMUST00000028841 Zcchc11B2RX14 1644 aaKnown RBP12.82□□□□□ -0.36
Usp8-201ENSMUST00000028841 Pbrm1Q8BSQ9 1634 aaKnown RBP12.82□□□□□ -0.36
Usp8-201ENSMUST00000028841 Plb1Q3TTY0 1478 aa12.79□□□□□ -0.36
Usp8-201ENSMUST00000028841 Kif15Q6P9L6 1387 aa12.76□□□□□ -0.37
Usp8-201ENSMUST00000028841 Samd9lQ69Z37 1561 aa12.75□□□□□ -0.37
Usp8-201ENSMUST00000028841 PogzQ8BZH4 1409 aaKnown RBP12.7□□□□□ -0.38
Usp8-201ENSMUST00000028841 Nup160Q9Z0W3 1402 aaKnown RBP12.7□□□□□ -0.38
Usp8-201ENSMUST00000028841 Disp1Q3TDN0 1521 aa12.7□□□□□ -0.38
Usp8-201ENSMUST00000028841 Dhx29Q6PGC1 1365 aaKnown RBP12.66□□□□□ -0.38
Usp8-201ENSMUST00000028841 Ift140E9PY46 1464 aa12.66□□□□□ -0.38
Usp8-201ENSMUST00000028841 Magi3Q9EQJ9 1476 aa12.64□□□□□ -0.39
Usp8-201ENSMUST00000028841 Grin2bQ01097 1482 aa12.64□□□□□ -0.39
Usp8-201ENSMUST00000028841 Golga3P55937 1487 aa12.63□□□□□ -0.39
Usp8-201ENSMUST00000028841 Ehmt2Q9Z148 1263 aaKnown RBP12.62□□□□□ -0.39
Usp8-201ENSMUST00000028841 Chd1P40201 1711 aa12.62□□□□□ -0.39
Usp8-201ENSMUST00000028841 LrpprcQ6PB66 1392 aaKnown RBP12.62□□□□□ -0.39
Usp8-201ENSMUST00000028841 Pprc1Q6NZN1 1644 aa12.61□□□□□ -0.39
Usp8-201ENSMUST00000028841 Cep164Q5DU05 1446 aa12.6□□□□□ -0.39
Usp8-201ENSMUST00000028841 Duox2A2AQ99 1517 aa12.59□□□□□ -0.39
Usp8-201ENSMUST00000028841 Fmn1Q05860 1466 aa12.58□□□□□ -0.4
Usp8-201ENSMUST00000028841 Dnmt1P13864 1620 aaKnown RBP12.55□□□□□ -0.4
Usp8-201ENSMUST00000028841 Top2aQ01320 1528 aaKnown RBP12.53□□□□□ -0.4
Usp8-201ENSMUST00000028841 Abca16E9PWJ7 1678 aa12.52□□□□□ -0.41
Usp8-201ENSMUST00000028841 Abcc2Q8VI47 1543 aa12.52□□□□□ -0.41
Usp8-201ENSMUST00000028841 Ccdc18Q640L5 1455 aa12.51□□□□□ -0.41
Usp8-201ENSMUST00000028841 BC005561E9Q5E2 1589 aa12.5□□□□□ -0.41
Usp8-201ENSMUST00000028841 Cep170Q6A065 1588 aa12.48□□□□□ -0.41
Usp8-201ENSMUST00000028841 Setbp1Q9Z180 1582 aa12.48□□□□□ -0.41
Usp8-201ENSMUST00000028841 Pla2r1Q62028 1487 aa12.48□□□□□ -0.41
Usp8-201ENSMUST00000028841 AqrQ8CFQ3 1481 aaKnown RBP12.47□□□□□ -0.41
Usp8-201ENSMUST00000028841 Adamts12Q811B3 1600 aa12.47□□□□□ -0.41
Usp8-201ENSMUST00000028841 Arhgef5E9Q7D5 1581 aa12.46□□□□□ -0.42
Usp8-201ENSMUST00000028841 Grin2aP35436 1464 aa12.45□□□□□ -0.42
Usp8-201ENSMUST00000028841 Map3k4O08648 1597 aa12.44□□□□□ -0.42
Usp8-201ENSMUST00000028841 NrkQ9R0G8 1455 aa12.44□□□□□ -0.42
Usp8-201ENSMUST00000028841 Efcab5A0JP43 1406 aa12.42□□□□□ -0.42
Usp8-201ENSMUST00000028841 Cc2d2bA0A286YDU8 1405 aa12.42□□□□□ -0.42
Usp8-201ENSMUST00000028841 Eif4g1Q6NZJ6 1600 aaKnown RBP12.4□□□□□ -0.42
Usp8-201ENSMUST00000028841 Arhgef12Q8R4H2 1543 aaKnown RBP12.4□□□□□ -0.42
Usp8-201ENSMUST00000028841 Trim41Q5NCC3 630 aa12.39□□□□□ -0.43
Usp8-201ENSMUST00000028841 PtprkP35822 1457 aa12.39□□□□□ -0.43
Usp8-201ENSMUST00000028841 SynmQ70IV5 1561 aa12.39□□□□□ -0.43
Usp8-201ENSMUST00000028841 Adgrl3Q80TS3 1537 aa12.37□□□□□ -0.43
Usp8-201ENSMUST00000028841 PtprtQ99M80 1454 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms