RNA–Protein interactions for RNA: ENSMUST00000026433.8

Smarcc2-201, Transcript of SWI/SNF complex subunit SMARCC2, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarcc2, Length 4,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2-201ENSMUST00000026433 Rhox8Q6VSS7 320 aa17.16■□□□□ 0.34
Smarcc2-201ENSMUST00000026433 Gm35339A0A140LHH9 1649 aa16.86■□□□□ 0.29
Smarcc2-201ENSMUST00000026433 NischQ80TM9 1593 aa16.78■□□□□ 0.28
Smarcc2-201ENSMUST00000026433 Rpgrip1Q9EPQ2 1331 aa16.56■□□□□ 0.24
Smarcc2-201ENSMUST00000026433 Abcc9P70170 1546 aa16.27■□□□□ 0.19
Smarcc2-201ENSMUST00000026433 Ehmt2Q9Z148 1263 aaKnown RBP16.22■□□□□ 0.19
Smarcc2-201ENSMUST00000026433 Abcc8B2RUS7 1588 aa16.2■□□□□ 0.18
Smarcc2-201ENSMUST00000026433 Las1lA2BE28 776 aaKnown RBP16.09■□□□□ 0.17
Smarcc2-201ENSMUST00000026433 Cngb1E1AZ71 1325 aa15.88■□□□□ 0.13
Smarcc2-201ENSMUST00000026433 ScribQ80U72 1612 aa15.71■□□□□ 0.11
Smarcc2-201ENSMUST00000026433 Zeb1Q64318 1117 aa15.62■□□□□ 0.09
Smarcc2-201ENSMUST00000026433 Wdr66E9Q743 1299 aa15.62■□□□□ 0.09
Smarcc2-201ENSMUST00000026433 Pelp1Q9DBD5 1123 aaKnown RBP15.43■□□□□ 0.06
Smarcc2-201ENSMUST00000026433 CenpbP27790 599 aa15.36■□□□□ 0.05
Smarcc2-201ENSMUST00000026433 Acin1Q9JIX8 1338 aaKnown RBP15.35■□□□□ 0.05
Smarcc2-201ENSMUST00000026433 Ccdc136Q3TVA9 1136 aa15.25■□□□□ 0.03
Smarcc2-201ENSMUST00000026433 Esf1Q3V1V3 845 aaKnown RBP15.25■□□□□ 0.03
Smarcc2-201ENSMUST00000026433 Amer1Q7TS75 1132 aa15.2■□□□□ 0.02
Smarcc2-201ENSMUST00000026433 Pcgf6Q99NA9 353 aa15.17■□□□□ 0.02
Smarcc2-201ENSMUST00000026433 Gab3Q8BSM5 595 aa15.11■□□□□ 0.01
Smarcc2-201ENSMUST00000026433 Kdm5dQ62240 1548 aa15.06■□□□□ 0
Smarcc2-201ENSMUST00000026433 Trim41Q5NCC3 630 aa15.05■□□□□ 0
Smarcc2-201ENSMUST00000026433 Myt1Q8CFC2 1127 aa14.98□□□□□ -0.01
Smarcc2-201ENSMUST00000026433 NefmP08553 848 aa14.91□□□□□ -0.02
Smarcc2-201ENSMUST00000026433 Ube2uB1AUC4 352 aa14.9□□□□□ -0.02
Smarcc2-201ENSMUST00000026433 Ttbk1Q6PCN3 1308 aa14.85□□□□□ -0.03
Smarcc2-201ENSMUST00000026433 Cdk11bP24788 784 aaKnown RBP14.84□□□□□ -0.03
Smarcc2-201ENSMUST00000026433 Supt5hO55201 1082 aaKnown RBP14.78□□□□□ -0.04
Smarcc2-201ENSMUST00000026433 NacadQ5SWP3 1504 aa14.76□□□□□ -0.05
Smarcc2-201ENSMUST00000026433 Dcaf1Q80TR8 1506 aa14.76□□□□□ -0.05
Smarcc2-201ENSMUST00000026433 Slc24a1Q91WD8 1130 aa14.73□□□□□ -0.05
Smarcc2-201ENSMUST00000026433 Zcchc6Q5BLK4 1491 aaKnown RBP14.73□□□□□ -0.05
Smarcc2-201ENSMUST00000026433 UbtfP25976 765 aaKnown RBP14.72□□□□□ -0.05
Smarcc2-201ENSMUST00000026433 Myt1lP97500 1187 aa14.71□□□□□ -0.05
Smarcc2-201ENSMUST00000026433 Stra8P70278 393 aa14.68□□□□□ -0.06
Smarcc2-201ENSMUST00000026433 DiexfQ8BTT6 772 aaKnown RBP14.68□□□□□ -0.06
Smarcc2-201ENSMUST00000026433 Nop58Q6DFW4 536 aaKnown RBP14.67□□□□□ -0.06
Smarcc2-201ENSMUST00000026433 BicraF8VPZ9 1578 aa14.66□□□□□ -0.06
Smarcc2-201ENSMUST00000026433 Rb1cc1Q9ESK9 1588 aa14.64□□□□□ -0.07
Smarcc2-201ENSMUST00000026433 Npm2Q80W85 207 aa14.63□□□□□ -0.07
Smarcc2-201ENSMUST00000026433 Ppargc1bQ8VHJ7 1014 aa14.62□□□□□ -0.07
Smarcc2-201ENSMUST00000026433 Sycp2Q9CUU3 1500 aa14.61□□□□□ -0.07
Smarcc2-201ENSMUST00000026433 4933416C03RikQ3V063 378 aa14.56□□□□□ -0.08
Smarcc2-201ENSMUST00000026433 Tnnt3Q9QZ47 272 aa14.5□□□□□ -0.09
Smarcc2-201ENSMUST00000026433 HrcG5E8J6 738 aa14.46□□□□□ -0.09
Smarcc2-201ENSMUST00000026433 Neurod1Q60867 357 aa14.45□□□□□ -0.1
Smarcc2-201ENSMUST00000026433 Il27Q8K3I6 234 aa14.41□□□□□ -0.1
Smarcc2-201ENSMUST00000026433 4930567H17RikQ3V0K5 233 aa14.39□□□□□ -0.11
Smarcc2-201ENSMUST00000026433 Baz1aO88379 1555 aa14.37□□□□□ -0.11
Smarcc2-201ENSMUST00000026433 Npm1Q61937 292 aaKnown RBP14.34□□□□□ -0.11
Smarcc2-201ENSMUST00000026433 Ccdc180J3QNE4 1664 aa14.33□□□□□ -0.12
Smarcc2-201ENSMUST00000026433 Eif5bQ05D44 1216 aaKnown RBP14.33□□□□□ -0.12
Smarcc2-201ENSMUST00000026433 Gm38655A0A286YDK6 273 aa14.33□□□□□ -0.12
Smarcc2-201ENSMUST00000026433 Csrnp3P59055 597 aa14.29□□□□□ -0.12
Smarcc2-201ENSMUST00000026433 Rtl5Q5DTT4 599 aa14.29□□□□□ -0.12
Smarcc2-201ENSMUST00000026433 NrdcQ8BHG1 1161 aa14.23□□□□□ -0.13
Smarcc2-201ENSMUST00000026433 Ubl4bQ9CQ84 188 aa14.22□□□□□ -0.13
Smarcc2-201ENSMUST00000026433 NclP09405 707 aaKnown RBP14.21□□□□□ -0.13
Smarcc2-201ENSMUST00000026433 Cecr2E9Q2Z1 1453 aa14.2□□□□□ -0.14
Smarcc2-201ENSMUST00000026433 Mier1Q5UAK0 511 aa14.19□□□□□ -0.14
Smarcc2-201ENSMUST00000026433 TonslQ6NZL6 1363 aa14.17□□□□□ -0.14
Smarcc2-201ENSMUST00000026433 Anks4bQ8K3X6 423 aa14.16□□□□□ -0.14
Smarcc2-201ENSMUST00000026433 Ercc6F8VPZ5 1481 aa14.16□□□□□ -0.14
Smarcc2-201ENSMUST00000026433 Brd4Q9ESU6 1400 aaKnown RBP14.15□□□□□ -0.14
Smarcc2-201ENSMUST00000026433 Dnajc5bQ9CQ94 199 aa14.15□□□□□ -0.14
Smarcc2-201ENSMUST00000026433 Anp32aO35381 247 aa14.15□□□□□ -0.14
Smarcc2-201ENSMUST00000026433 NeflP08551 543 aa14.13□□□□□ -0.15
Smarcc2-201ENSMUST00000026433 Rtl1Q7M732 1744 aa14.12□□□□□ -0.15
Smarcc2-201ENSMUST00000026433 Sall2Q9QX96 1004 aa14.11□□□□□ -0.15
Smarcc2-201ENSMUST00000026433 Pds5bQ4VA53 1446 aaKnown RBP14.11□□□□□ -0.15
Smarcc2-201ENSMUST00000026433 Aplp2Q06335 707 aa14.1□□□□□ -0.15
Smarcc2-201ENSMUST00000026433 Smarca2Q6DIC0 1577 aa14.09□□□□□ -0.15
Smarcc2-201ENSMUST00000026433 DaxxO35613 739 aa14.08□□□□□ -0.16
Smarcc2-201ENSMUST00000026433 ClspnQ80YR7 1315 aa14.08□□□□□ -0.16
Smarcc2-201ENSMUST00000026433 Fam50aQ9WV03 339 aaKnown RBP14.07□□□□□ -0.16
Smarcc2-201ENSMUST00000026433 Crybg2B7ZCC2 1516 aa14.06□□□□□ -0.16
Smarcc2-201ENSMUST00000026433 1700123L14RikQ3V2K7 440 aa14□□□□□ -0.17
Smarcc2-201ENSMUST00000026433 Anp32bQ9EST5 272 aaKnown RBP13.98□□□□□ -0.17
Smarcc2-201ENSMUST00000026433 Ap3b1Q9Z1T1 1105 aa13.96□□□□□ -0.18
Smarcc2-201ENSMUST00000026433 Mapk8ip2Q9ERE9 830 aa13.93□□□□□ -0.18
Smarcc2-201ENSMUST00000026433 Rsf1E9PWW9 1441 aaKnown RBP13.83□□□□□ -0.2
Smarcc2-201ENSMUST00000026433 Synj1Q8CHC4 1574 aa13.78□□□□□ -0.2
Smarcc2-201ENSMUST00000026433 Fam71e1A1L3C1 212 aa13.77□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Ppp4r2Q0VGB7 417 aa13.76□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Bcl11aQ9QYE3 773 aa13.76□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Smarca4Q3TKT4 1613 aaKnown RBP13.75□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Calr4Q3TQS0 420 aa13.75□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Eid3Q3V124 375 aa13.75□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Kif15Q6P9L6 1387 aa13.73□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Thoc2B1AZI6 1594 aaKnown RBP13.72□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Iqgap2Q3UQ44 1575 aa13.71□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Atad2bE9Q166 1460 aaKnown RBP13.71□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Plekhg3Q4VAC9 1341 aa13.71□□□□□ -0.21
Smarcc2-201ENSMUST00000026433 Unc13aQ4KUS2 1712 aa13.7□□□□□ -0.22
Smarcc2-201ENSMUST00000026433 ArxO35085 564 aa13.69□□□□□ -0.22
Smarcc2-201ENSMUST00000026433 Cep164Q5DU05 1446 aa13.68□□□□□ -0.22
Smarcc2-201ENSMUST00000026433 Phldb1Q6PDH0 1371 aaKnown RBP13.66□□□□□ -0.22
Smarcc2-201ENSMUST00000026433 CftrP26361 1476 aa13.65□□□□□ -0.22
Smarcc2-201ENSMUST00000026433 Ccdc18Q640L5 1455 aa13.65□□□□□ -0.22
Smarcc2-201ENSMUST00000026433 Wdr43Q6ZQL4 677 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms