RNA–Protein interactions for RNA: ENSMUST00000025774.9

Sf3b2-201, Transcript of Splicing factor 3b, subunit 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b2, Length 3,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2-201ENSMUST00000025774 NischQ80TM9 1593 aa17.34■□□□□ 0.37
Sf3b2-201ENSMUST00000025774 Rhox8Q6VSS7 320 aa17.15■□□□□ 0.34
Sf3b2-201ENSMUST00000025774 Gm35339A0A140LHH9 1649 aa16.92■□□□□ 0.3
Sf3b2-201ENSMUST00000025774 Abcc9P70170 1546 aa16.75■□□□□ 0.27
Sf3b2-201ENSMUST00000025774 Abcc8B2RUS7 1588 aa16.46■□□□□ 0.23
Sf3b2-201ENSMUST00000025774 Ehmt2Q9Z148 1263 aaKnown RBP16.22■□□□□ 0.19
Sf3b2-201ENSMUST00000025774 Rpgrip1Q9EPQ2 1331 aa16.13■□□□□ 0.17
Sf3b2-201ENSMUST00000025774 Rtl1Q7M732 1744 aa16.09■□□□□ 0.17
Sf3b2-201ENSMUST00000025774 Ccdc180J3QNE4 1664 aa16.09■□□□□ 0.17
Sf3b2-201ENSMUST00000025774 Acin1Q9JIX8 1338 aaKnown RBP15.88■□□□□ 0.13
Sf3b2-201ENSMUST00000025774 Ccdc136Q3TVA9 1136 aa15.86■□□□□ 0.13
Sf3b2-201ENSMUST00000025774 Zcchc6Q5BLK4 1491 aaKnown RBP15.61■□□□□ 0.09
Sf3b2-201ENSMUST00000025774 Pcgf6Q99NA9 353 aa15.57■□□□□ 0.08
Sf3b2-201ENSMUST00000025774 HrcG5E8J6 738 aa15.56■□□□□ 0.08
Sf3b2-201ENSMUST00000025774 ScribQ80U72 1612 aa15.53■□□□□ 0.08
Sf3b2-201ENSMUST00000025774 Trim41Q5NCC3 630 aa15.5■□□□□ 0.07
Sf3b2-201ENSMUST00000025774 Dcaf1Q80TR8 1506 aa15.32■□□□□ 0.04
Sf3b2-201ENSMUST00000025774 Supt5hO55201 1082 aaKnown RBP15.29■□□□□ 0.04
Sf3b2-201ENSMUST00000025774 Gab3Q8BSM5 595 aa15.22■□□□□ 0.03
Sf3b2-201ENSMUST00000025774 Kdm5dQ62240 1548 aa15.21■□□□□ 0.03
Sf3b2-201ENSMUST00000025774 Zeb1Q64318 1117 aa15.19■□□□□ 0.02
Sf3b2-201ENSMUST00000025774 Rb1cc1Q9ESK9 1588 aa15.19■□□□□ 0.02
Sf3b2-201ENSMUST00000025774 Cngb1E1AZ71 1325 aa15.11■□□□□ 0.01
Sf3b2-201ENSMUST00000025774 NacadQ5SWP3 1504 aa14.99□□□□□ -0.01
Sf3b2-201ENSMUST00000025774 Neurod1Q60867 357 aa14.99□□□□□ -0.01
Sf3b2-201ENSMUST00000025774 Chic1Q8CBW7 227 aa14.94□□□□□ -0.02
Sf3b2-201ENSMUST00000025774 Baz1aO88379 1555 aa14.92□□□□□ -0.02
Sf3b2-201ENSMUST00000025774 Cep164Q5DU05 1446 aa14.91□□□□□ -0.02
Sf3b2-201ENSMUST00000025774 Mier1Q5UAK0 511 aa14.87□□□□□ -0.03
Sf3b2-201ENSMUST00000025774 NefmP08553 848 aa14.8□□□□□ -0.04
Sf3b2-201ENSMUST00000025774 Sall2Q9QX96 1004 aa14.78□□□□□ -0.04
Sf3b2-201ENSMUST00000025774 Wdr66E9Q743 1299 aa14.76□□□□□ -0.05
Sf3b2-201ENSMUST00000025774 Esf1Q3V1V3 845 aaKnown RBP14.75□□□□□ -0.05
Sf3b2-201ENSMUST00000025774 UbtfP25976 765 aaKnown RBP14.73□□□□□ -0.05
Sf3b2-201ENSMUST00000025774 Ppargc1bQ8VHJ7 1014 aa14.72□□□□□ -0.05
Sf3b2-201ENSMUST00000025774 Rsf1E9PWW9 1441 aaKnown RBP14.72□□□□□ -0.05
Sf3b2-201ENSMUST00000025774 Sycp2Q9CUU3 1500 aa14.7□□□□□ -0.06
Sf3b2-201ENSMUST00000025774 Las1lA2BE28 776 aaKnown RBP14.66□□□□□ -0.06
Sf3b2-201ENSMUST00000025774 Smarca2Q6DIC0 1577 aa14.6□□□□□ -0.07
Sf3b2-201ENSMUST00000025774 Myt1lP97500 1187 aa14.58□□□□□ -0.07
Sf3b2-201ENSMUST00000025774 Ccdc88bQ4QRL3 1481 aa14.58□□□□□ -0.08
Sf3b2-201ENSMUST00000025774 Crybg2B7ZCC2 1516 aa14.57□□□□□ -0.08
Sf3b2-201ENSMUST00000025774 Csrnp3P59055 597 aa14.56□□□□□ -0.08
Sf3b2-201ENSMUST00000025774 Aebp2Q9Z248 504 aaKnown RBP14.53□□□□□ -0.08
Sf3b2-201ENSMUST00000025774 Cecr2E9Q2Z1 1453 aa14.52□□□□□ -0.09
Sf3b2-201ENSMUST00000025774 BicraF8VPZ9 1578 aa14.49□□□□□ -0.09
Sf3b2-201ENSMUST00000025774 1700123L14RikQ3V2K7 440 aa14.48□□□□□ -0.09
Sf3b2-201ENSMUST00000025774 Brd4Q9ESU6 1400 aaKnown RBP14.46□□□□□ -0.09
Sf3b2-201ENSMUST00000025774 Anks4bQ8K3X6 423 aa14.46□□□□□ -0.09
Sf3b2-201ENSMUST00000025774 Cdk11bP24788 784 aaKnown RBP14.45□□□□□ -0.1
Sf3b2-201ENSMUST00000025774 Nop58Q6DFW4 536 aaKnown RBP14.43□□□□□ -0.1
Sf3b2-201ENSMUST00000025774 Golga3P55937 1487 aa14.41□□□□□ -0.1
Sf3b2-201ENSMUST00000025774 Gm38655A0A286YDK6 273 aa14.39□□□□□ -0.11
Sf3b2-201ENSMUST00000025774 Npm2Q80W85 207 aa14.37□□□□□ -0.11
Sf3b2-201ENSMUST00000025774 ClspnQ80YR7 1315 aa14.32□□□□□ -0.12
Sf3b2-201ENSMUST00000025774 Plekhg3Q4VAC9 1341 aa14.3□□□□□ -0.12
Sf3b2-201ENSMUST00000025774 TonslQ6NZL6 1363 aa14.29□□□□□ -0.12
Sf3b2-201ENSMUST00000025774 Synj1Q8CHC4 1574 aa14.25□□□□□ -0.13
Sf3b2-201ENSMUST00000025774 CenpbP27790 599 aa14.2□□□□□ -0.14
Sf3b2-201ENSMUST00000025774 Eid3Q3V124 375 aa14.18□□□□□ -0.14
Sf3b2-201ENSMUST00000025774 Ap3b1Q9Z1T1 1105 aa14.17□□□□□ -0.14
Sf3b2-201ENSMUST00000025774 Aplp2Q06335 707 aa14.13□□□□□ -0.15
Sf3b2-201ENSMUST00000025774 CftrP26361 1476 aa14.13□□□□□ -0.15
Sf3b2-201ENSMUST00000025774 Mapk8ip2Q9ERE9 830 aa14.13□□□□□ -0.15
Sf3b2-201ENSMUST00000025774 Clip1Q922J3 1391 aa14.1□□□□□ -0.15
Sf3b2-201ENSMUST00000025774 Il27Q8K3I6 234 aa14.05□□□□□ -0.16
Sf3b2-201ENSMUST00000025774 Cep162Q6ZQ06 1403 aa14.04□□□□□ -0.16
Sf3b2-201ENSMUST00000025774 Smarca4Q3TKT4 1613 aaKnown RBP14.03□□□□□ -0.16
Sf3b2-201ENSMUST00000025774 Rapgef2Q8CHG7 1496 aa14.02□□□□□ -0.17
Sf3b2-201ENSMUST00000025774 SafbD3YXK2 937 aaKnown RBP13.98□□□□□ -0.17
Sf3b2-201ENSMUST00000025774 Cc2d2aQ8CFW7 1633 aa13.98□□□□□ -0.17
Sf3b2-201ENSMUST00000025774 Hnrnpul2Q00PI9 745 aaKnown RBP13.96□□□□□ -0.17
Sf3b2-201ENSMUST00000025774 Cttnbp2B9EJA2 1648 aa13.95□□□□□ -0.18
Sf3b2-201ENSMUST00000025774 Top2bQ64511 1612 aa13.94□□□□□ -0.18
Sf3b2-201ENSMUST00000025774 Fam50aQ9WV03 339 aaKnown RBP13.92□□□□□ -0.18
Sf3b2-201ENSMUST00000025774 Iqgap2Q3UQ44 1575 aa13.92□□□□□ -0.18
Sf3b2-201ENSMUST00000025774 Fmn1Q05860 1466 aa13.9□□□□□ -0.18
Sf3b2-201ENSMUST00000025774 NclP09405 707 aaKnown RBP13.89□□□□□ -0.19
Sf3b2-201ENSMUST00000025774 Fam71e1A1L3C1 212 aa13.87□□□□□ -0.19
Sf3b2-201ENSMUST00000025774 Slc24a1Q91WD8 1130 aa13.86□□□□□ -0.19
Sf3b2-201ENSMUST00000025774 Myt1Q8CFC2 1127 aa13.85□□□□□ -0.19
Sf3b2-201ENSMUST00000025774 Lmod2Q3UHZ5 550 aa13.84□□□□□ -0.19
Sf3b2-201ENSMUST00000025774 Atad2bE9Q166 1460 aaKnown RBP13.84□□□□□ -0.19
Sf3b2-201ENSMUST00000025774 Tnnt3Q9QZ47 272 aa13.82□□□□□ -0.2
Sf3b2-201ENSMUST00000025774 Top2aQ01320 1528 aaKnown RBP13.82□□□□□ -0.2
Sf3b2-201ENSMUST00000025774 Ube2uB1AUC4 352 aa13.8□□□□□ -0.2
Sf3b2-201ENSMUST00000025774 Pds5bQ4VA53 1446 aaKnown RBP13.8□□□□□ -0.2
Sf3b2-201ENSMUST00000025774 Ncapd3Q6ZQK0 1506 aa13.78□□□□□ -0.2
Sf3b2-201ENSMUST00000025774 Setd5Q5XJV7 1441 aa13.78□□□□□ -0.2
Sf3b2-201ENSMUST00000025774 Eea1Q8BL66 1411 aa13.74□□□□□ -0.21
Sf3b2-201ENSMUST00000025774 BlmO88700 1416 aa13.72□□□□□ -0.21
Sf3b2-201ENSMUST00000025774 Frmpd1A2AKB4 1549 aa13.72□□□□□ -0.21
Sf3b2-201ENSMUST00000025774 Stra8P70278 393 aa13.68□□□□□ -0.22
Sf3b2-201ENSMUST00000025774 Hspa5P20029 655 aaKnown RBP13.66□□□□□ -0.22
Sf3b2-201ENSMUST00000025774 PtprkP35822 1457 aa13.65□□□□□ -0.22
Sf3b2-201ENSMUST00000025774 Arap1Q4LDD4 1452 aa13.65□□□□□ -0.22
Sf3b2-201ENSMUST00000025774 Kif15Q6P9L6 1387 aa13.64□□□□□ -0.23
Sf3b2-201ENSMUST00000025774 Eif5bQ05D44 1216 aaKnown RBP13.64□□□□□ -0.23
Sf3b2-201ENSMUST00000025774 Arhgap35Q91YM2 1499 aa13.64□□□□□ -0.23
Sf3b2-201ENSMUST00000025774 Ercc6F8VPZ5 1481 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 183.7 ms