RNA–Protein interactions for RNA: ENSMUST00000025177.12

Trappc8-201, Transcript of Trafficking protein particle complex 8, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Trappc8, Length 5,178 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc8-201ENSMUST00000025177 NischQ80TM9 1593 aa13.86□□□□□ -0.19
Trappc8-201ENSMUST00000025177 Abcc9P70170 1546 aa13.83□□□□□ -0.2
Trappc8-201ENSMUST00000025177 Rhox8Q6VSS7 320 aa13.4□□□□□ -0.27
Trappc8-201ENSMUST00000025177 Gm35339A0A140LHH9 1649 aa13.3□□□□□ -0.28
Trappc8-201ENSMUST00000025177 Abcc8B2RUS7 1588 aa13.11□□□□□ -0.31
Trappc8-201ENSMUST00000025177 NacadQ5SWP3 1504 aa12.93□□□□□ -0.34
Trappc8-201ENSMUST00000025177 Esf1Q3V1V3 845 aaKnown RBP12.75□□□□□ -0.37
Trappc8-201ENSMUST00000025177 Ercc6F8VPZ5 1481 aa12.74□□□□□ -0.37
Trappc8-201ENSMUST00000025177 Pds5bQ4VA53 1446 aaKnown RBP12.73□□□□□ -0.37
Trappc8-201ENSMUST00000025177 Ubl4bQ9CQ84 188 aa12.56□□□□□ -0.4
Trappc8-201ENSMUST00000025177 Trim41Q5NCC3 630 aa12.54□□□□□ -0.4
Trappc8-201ENSMUST00000025177 Ttbk1Q6PCN3 1308 aa12.53□□□□□ -0.4
Trappc8-201ENSMUST00000025177 Npm1Q61937 292 aaKnown RBP12.43□□□□□ -0.42
Trappc8-201ENSMUST00000025177 Zcchc6Q5BLK4 1491 aaKnown RBP12.43□□□□□ -0.42
Trappc8-201ENSMUST00000025177 Rb1cc1Q9ESK9 1588 aa12.38□□□□□ -0.43
Trappc8-201ENSMUST00000025177 Kdm5dQ62240 1548 aa12.37□□□□□ -0.43
Trappc8-201ENSMUST00000025177 Sycp2Q9CUU3 1500 aa12.36□□□□□ -0.43
Trappc8-201ENSMUST00000025177 Pelp1Q9DBD5 1123 aaKnown RBP12.34□□□□□ -0.43
Trappc8-201ENSMUST00000025177 Baz1bQ9Z277 1479 aa12.27□□□□□ -0.45
Trappc8-201ENSMUST00000025177 Zeb1Q64318 1117 aa12.24□□□□□ -0.45
Trappc8-201ENSMUST00000025177 Dcaf1Q80TR8 1506 aa12.24□□□□□ -0.45
Trappc8-201ENSMUST00000025177 Atad2bE9Q166 1460 aaKnown RBP12.22□□□□□ -0.45
Trappc8-201ENSMUST00000025177 Phldb1Q6PDH0 1371 aaKnown RBP12.22□□□□□ -0.45
Trappc8-201ENSMUST00000025177 ScribQ80U72 1612 aa12.2□□□□□ -0.46
Trappc8-201ENSMUST00000025177 Pabpn1Q8CCS6 302 aaKnown RBP12.11□□□□□ -0.47
Trappc8-201ENSMUST00000025177 Il27Q8K3I6 234 aa12.11□□□□□ -0.47
Trappc8-201ENSMUST00000025177 Cngb1E1AZ71 1325 aa12.06□□□□□ -0.48
Trappc8-201ENSMUST00000025177 Dnajc5P60904 198 aa12.04□□□□□ -0.48
Trappc8-201ENSMUST00000025177 Ccdc136Q3TVA9 1136 aa12□□□□□ -0.49
Trappc8-201ENSMUST00000025177 Rsf1E9PWW9 1441 aaKnown RBP11.97□□□□□ -0.49
Trappc8-201ENSMUST00000025177 Cep164Q5DU05 1446 aa11.97□□□□□ -0.49
Trappc8-201ENSMUST00000025177 Plekhg3Q4VAC9 1341 aa11.96□□□□□ -0.5
Trappc8-201ENSMUST00000025177 Dnajc5bQ9CQ94 199 aa11.94□□□□□ -0.5
Trappc8-201ENSMUST00000025177 Brd4Q9ESU6 1400 aaKnown RBP11.93□□□□□ -0.5
Trappc8-201ENSMUST00000025177 Crybg2B7ZCC2 1516 aa11.92□□□□□ -0.5
Trappc8-201ENSMUST00000025177 Baz1aO88379 1555 aa11.9□□□□□ -0.5
Trappc8-201ENSMUST00000025177 Npm2Q80W85 207 aa11.89□□□□□ -0.51
Trappc8-201ENSMUST00000025177 Mrc2Q64449 1479 aa11.89□□□□□ -0.51
Trappc8-201ENSMUST00000025177 Smarca2Q6DIC0 1577 aa11.85□□□□□ -0.51
Trappc8-201ENSMUST00000025177 Kif15Q6P9L6 1387 aa11.83□□□□□ -0.52
Trappc8-201ENSMUST00000025177 Cc2d2aQ8CFW7 1633 aa11.8□□□□□ -0.52
Trappc8-201ENSMUST00000025177 Ccdc18Q640L5 1455 aa11.8□□□□□ -0.52
Trappc8-201ENSMUST00000025177 Smarca4Q3TKT4 1613 aaKnown RBP11.78□□□□□ -0.52
Trappc8-201ENSMUST00000025177 Ppp1r18Q8BQ30 594 aa11.78□□□□□ -0.52
Trappc8-201ENSMUST00000025177 Safb2Q80YR5 991 aaKnown RBP11.68□□□□□ -0.54
Trappc8-201ENSMUST00000025177 Iqgap2Q3UQ44 1575 aa11.68□□□□□ -0.54
Trappc8-201ENSMUST00000025177 Ifnlr1Q8CGK5 535 aa11.66□□□□□ -0.54
Trappc8-201ENSMUST00000025177 Cux2P70298 1426 aa11.66□□□□□ -0.54
Trappc8-201ENSMUST00000025177 Plppr3Q7TPB0 716 aa11.66□□□□□ -0.54
Trappc8-201ENSMUST00000025177 Thoc2B1AZI6 1594 aaKnown RBP11.65□□□□□ -0.55
Trappc8-201ENSMUST00000025177 Fam135aQ6NS59 1506 aa11.64□□□□□ -0.55
Trappc8-201ENSMUST00000025177 BicraF8VPZ9 1578 aa11.59□□□□□ -0.55
Trappc8-201ENSMUST00000025177 MlecQ6ZQI3 291 aaKnown RBP11.55□□□□□ -0.56
Trappc8-201ENSMUST00000025177 Cyb5rlB1AS42 316 aa11.53□□□□□ -0.56
Trappc8-201ENSMUST00000025177 Cecr2E9Q2Z1 1453 aa11.52□□□□□ -0.57
Trappc8-201ENSMUST00000025177 Ccdc180J3QNE4 1664 aa11.52□□□□□ -0.57
Trappc8-201ENSMUST00000025177 Gm13697A2AK42 830 aa11.52□□□□□ -0.57
Trappc8-201ENSMUST00000025177 Top2bQ64511 1612 aa11.48□□□□□ -0.57
Trappc8-201ENSMUST00000025177 Wdr62Q3U3T8 1523 aa11.48□□□□□ -0.57
Trappc8-201ENSMUST00000025177 Frmpd1A2AKB4 1549 aa11.45□□□□□ -0.58
Trappc8-201ENSMUST00000025177 AknaQ80VW7 1404 aa11.44□□□□□ -0.58
Trappc8-201ENSMUST00000025177 MyclP10166 368 aa11.4□□□□□ -0.58
Trappc8-201ENSMUST00000025177 Ift140E9PY46 1464 aa11.39□□□□□ -0.59
Trappc8-201ENSMUST00000025177 Urb2E9Q7L1 1524 aaKnown RBP11.39□□□□□ -0.59
Trappc8-201ENSMUST00000025177 Dhx29Q6PGC1 1365 aaKnown RBP11.37□□□□□ -0.59
Trappc8-201ENSMUST00000025177 Fkbp15Q6P9Q6 1216 aaKnown RBP11.37□□□□□ -0.59
Trappc8-201ENSMUST00000025177 Fgd6Q69ZL1 1399 aa11.35□□□□□ -0.59
Trappc8-201ENSMUST00000025177 PtprkP35822 1457 aa11.34□□□□□ -0.59
Trappc8-201ENSMUST00000025177 LrpprcQ6PB66 1392 aaKnown RBP11.34□□□□□ -0.59
Trappc8-201ENSMUST00000025177 Arhgap27A2AB59 869 aa11.34□□□□□ -0.59
Trappc8-201ENSMUST00000025177 Cc2d2bA0A286YDU8 1405 aa11.31□□□□□ -0.6
Trappc8-201ENSMUST00000025177 Rsph4aQ8BYM7 716 aa11.3□□□□□ -0.6
Trappc8-201ENSMUST00000025177 Cttnbp2B9EJA2 1648 aa11.3□□□□□ -0.6
Trappc8-201ENSMUST00000025177 Myt1lP97500 1187 aa11.3□□□□□ -0.6
Trappc8-201ENSMUST00000025177 Shroom2A2ALU4 1481 aa11.3□□□□□ -0.6
Trappc8-201ENSMUST00000025177 Soga1E1U8D0 1418 aa11.29□□□□□ -0.6
Trappc8-201ENSMUST00000025177 Plb1Q3TTY0 1478 aa11.28□□□□□ -0.6
Trappc8-201ENSMUST00000025177 CadpsQ80TJ1 1355 aa11.28□□□□□ -0.6
Trappc8-201ENSMUST00000025177 CftrP26361 1476 aa11.27□□□□□ -0.6
Trappc8-201ENSMUST00000025177 Fbln2P37889 1221 aa11.25□□□□□ -0.61
Trappc8-201ENSMUST00000025177 NclP09405 707 aaKnown RBP11.22□□□□□ -0.61
Trappc8-201ENSMUST00000025177 Cdk11bP24788 784 aaKnown RBP11.2□□□□□ -0.62
Trappc8-201ENSMUST00000025177 Rpgrip1Q9EPQ2 1331 aa11.18□□□□□ -0.62
Trappc8-201ENSMUST00000025177 Adgrl3Q80TS3 1537 aa11.17□□□□□ -0.62
Trappc8-201ENSMUST00000025177 Arid3cA6PWV5 409 aa11.16□□□□□ -0.62
Trappc8-201ENSMUST00000025177 Hdac5Q9Z2V6 1113 aa11.15□□□□□ -0.62
Trappc8-201ENSMUST00000025177 Gm13695A2AK44 830 aa11.14□□□□□ -0.63
Trappc8-201ENSMUST00000025177 Ube2uB1AUC4 352 aa11.14□□□□□ -0.63
Trappc8-201ENSMUST00000025177 Zcchc11B2RX14 1644 aaKnown RBP11.13□□□□□ -0.63
Trappc8-201ENSMUST00000025177 Gm156Q58A37 223 aa11.13□□□□□ -0.63
Trappc8-201ENSMUST00000025177 Rtl1Q7M732 1744 aa11.13□□□□□ -0.63
Trappc8-201ENSMUST00000025177 Eif4g3Q80XI3 1579 aaKnown RBP11.12□□□□□ -0.63
Trappc8-201ENSMUST00000025177 Arhgef5E9Q7D5 1581 aa11.12□□□□□ -0.63
Trappc8-201ENSMUST00000025177 Golga3P55937 1487 aa11.1□□□□□ -0.63
Trappc8-201ENSMUST00000025177 Gab3Q8BSM5 595 aa11.09□□□□□ -0.63
Trappc8-201ENSMUST00000025177 Crocc2F6XLV1 1638 aa11.08□□□□□ -0.64
Trappc8-201ENSMUST00000025177 Igf1rQ60751 1373 aa11.06□□□□□ -0.64
Trappc8-201ENSMUST00000025177 Gm14025A2AP89 1413 aa11.06□□□□□ -0.64
Trappc8-201ENSMUST00000025177 Gapvd1Q6PAR5 1458 aa11.06□□□□□ -0.64
Trappc8-201ENSMUST00000025177 Ecm2Q5FW85 670 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms