RNA–Protein interactions for RNA: ENSMUST00000023068.7

Smc1b-201, Transcript of Structural maintenance of chromosomes protein 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1b, Length 4,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1b-201ENSMUST00000023068 NischQ80TM9 1593 aa15.33■□□□□ 0.04
Smc1b-201ENSMUST00000023068 Gm35339A0A140LHH9 1649 aa14.86□□□□□ -0.03
Smc1b-201ENSMUST00000023068 Abcc9P70170 1546 aa14.75□□□□□ -0.05
Smc1b-201ENSMUST00000023068 Abcc8B2RUS7 1588 aa14.55□□□□□ -0.08
Smc1b-201ENSMUST00000023068 Rhox8Q6VSS7 320 aa14.46□□□□□ -0.09
Smc1b-201ENSMUST00000023068 ScribQ80U72 1612 aa13.73□□□□□ -0.21
Smc1b-201ENSMUST00000023068 Kdm5dQ62240 1548 aa13.47□□□□□ -0.25
Smc1b-201ENSMUST00000023068 Ccdc136Q3TVA9 1136 aa13.46□□□□□ -0.25
Smc1b-201ENSMUST00000023068 Rb1cc1Q9ESK9 1588 aa13.43□□□□□ -0.26
Smc1b-201ENSMUST00000023068 NacadQ5SWP3 1504 aa13.32□□□□□ -0.28
Smc1b-201ENSMUST00000023068 Dcaf1Q80TR8 1506 aa13.28□□□□□ -0.28
Smc1b-201ENSMUST00000023068 Zcchc6Q5BLK4 1491 aaKnown RBP13.25□□□□□ -0.29
Smc1b-201ENSMUST00000023068 Rtl1Q7M732 1744 aa13.23□□□□□ -0.29
Smc1b-201ENSMUST00000023068 Baz1aO88379 1555 aa13.17□□□□□ -0.3
Smc1b-201ENSMUST00000023068 Ccdc180J3QNE4 1664 aa13.07□□□□□ -0.32
Smc1b-201ENSMUST00000023068 Sycp2Q9CUU3 1500 aa13.04□□□□□ -0.32
Smc1b-201ENSMUST00000023068 Trim41Q5NCC3 630 aa12.88□□□□□ -0.35
Smc1b-201ENSMUST00000023068 Cngb1E1AZ71 1325 aa12.88□□□□□ -0.35
Smc1b-201ENSMUST00000023068 Smarca2Q6DIC0 1577 aa12.82□□□□□ -0.36
Smc1b-201ENSMUST00000023068 BicraF8VPZ9 1578 aa12.82□□□□□ -0.36
Smc1b-201ENSMUST00000023068 Cecr2E9Q2Z1 1453 aa12.81□□□□□ -0.36
Smc1b-201ENSMUST00000023068 Esf1Q3V1V3 845 aaKnown RBP12.79□□□□□ -0.36
Smc1b-201ENSMUST00000023068 Ehmt2Q9Z148 1263 aaKnown RBP12.78□□□□□ -0.36
Smc1b-201ENSMUST00000023068 Crybg2B7ZCC2 1516 aa12.77□□□□□ -0.37
Smc1b-201ENSMUST00000023068 Gab3Q8BSM5 595 aa12.67□□□□□ -0.38
Smc1b-201ENSMUST00000023068 Brd4Q9ESU6 1400 aaKnown RBP12.62□□□□□ -0.39
Smc1b-201ENSMUST00000023068 HrcG5E8J6 738 aa12.61□□□□□ -0.39
Smc1b-201ENSMUST00000023068 Chic1Q8CBW7 227 aa12.59□□□□□ -0.39
Smc1b-201ENSMUST00000023068 Synj1Q8CHC4 1574 aa12.57□□□□□ -0.4
Smc1b-201ENSMUST00000023068 CftrP26361 1476 aa12.49□□□□□ -0.41
Smc1b-201ENSMUST00000023068 Rsf1E9PWW9 1441 aaKnown RBP12.45□□□□□ -0.42
Smc1b-201ENSMUST00000023068 Smarca4Q3TKT4 1613 aaKnown RBP12.44□□□□□ -0.42
Smc1b-201ENSMUST00000023068 Ccdc88bQ4QRL3 1481 aa12.43□□□□□ -0.42
Smc1b-201ENSMUST00000023068 Golga3P55937 1487 aa12.41□□□□□ -0.42
Smc1b-201ENSMUST00000023068 Il27Q8K3I6 234 aa12.36□□□□□ -0.43
Smc1b-201ENSMUST00000023068 Cep164Q5DU05 1446 aa12.35□□□□□ -0.43
Smc1b-201ENSMUST00000023068 Iqgap2Q3UQ44 1575 aa12.35□□□□□ -0.43
Smc1b-201ENSMUST00000023068 Cttnbp2B9EJA2 1648 aa12.34□□□□□ -0.43
Smc1b-201ENSMUST00000023068 Pds5bQ4VA53 1446 aaKnown RBP12.31□□□□□ -0.44
Smc1b-201ENSMUST00000023068 Atad2bE9Q166 1460 aaKnown RBP12.31□□□□□ -0.44
Smc1b-201ENSMUST00000023068 Myt1lP97500 1187 aa12.28□□□□□ -0.44
Smc1b-201ENSMUST00000023068 Cc2d2aQ8CFW7 1633 aa12.25□□□□□ -0.45
Smc1b-201ENSMUST00000023068 Npm2Q80W85 207 aa12.23□□□□□ -0.45
Smc1b-201ENSMUST00000023068 Ercc6F8VPZ5 1481 aa12.17□□□□□ -0.46
Smc1b-201ENSMUST00000023068 Frmpd1A2AKB4 1549 aa12.16□□□□□ -0.46
Smc1b-201ENSMUST00000023068 Top2bQ64511 1612 aa12.16□□□□□ -0.46
Smc1b-201ENSMUST00000023068 Kif15Q6P9L6 1387 aa12.13□□□□□ -0.47
Smc1b-201ENSMUST00000023068 Ubl4bQ9CQ84 188 aa12.12□□□□□ -0.47
Smc1b-201ENSMUST00000023068 Zeb1Q64318 1117 aa12.1□□□□□ -0.47
Smc1b-201ENSMUST00000023068 Dnajc5bQ9CQ94 199 aa12.1□□□□□ -0.47
Smc1b-201ENSMUST00000023068 Wdr62Q3U3T8 1523 aa12.09□□□□□ -0.47
Smc1b-201ENSMUST00000023068 Fmn1Q05860 1466 aa12.08□□□□□ -0.48
Smc1b-201ENSMUST00000023068 Acin1Q9JIX8 1338 aaKnown RBP12.03□□□□□ -0.48
Smc1b-201ENSMUST00000023068 Ap3b1Q9Z1T1 1105 aa12□□□□□ -0.49
Smc1b-201ENSMUST00000023068 Npm1Q61937 292 aaKnown RBP11.99□□□□□ -0.49
Smc1b-201ENSMUST00000023068 UbtfP25976 765 aaKnown RBP11.99□□□□□ -0.49
Smc1b-201ENSMUST00000023068 Rapgef2Q8CHG7 1496 aa11.97□□□□□ -0.49
Smc1b-201ENSMUST00000023068 Top2aQ01320 1528 aaKnown RBP11.96□□□□□ -0.5
Smc1b-201ENSMUST00000023068 Phldb1Q6PDH0 1371 aaKnown RBP11.95□□□□□ -0.5
Smc1b-201ENSMUST00000023068 Unc13aQ4KUS2 1712 aa11.94□□□□□ -0.5
Smc1b-201ENSMUST00000023068 Cux2P70298 1426 aa11.93□□□□□ -0.5
Smc1b-201ENSMUST00000023068 Plekhg3Q4VAC9 1341 aa11.92□□□□□ -0.5
Smc1b-201ENSMUST00000023068 PtprkP35822 1457 aa11.9□□□□□ -0.5
Smc1b-201ENSMUST00000023068 Thoc2B1AZI6 1594 aaKnown RBP11.9□□□□□ -0.5
Smc1b-201ENSMUST00000023068 Cep162Q6ZQ06 1403 aa11.9□□□□□ -0.5
Smc1b-201ENSMUST00000023068 Ccdc18Q640L5 1455 aa11.86□□□□□ -0.51
Smc1b-201ENSMUST00000023068 Lamc3Q9R0B6 1581 aa11.85□□□□□ -0.51
Smc1b-201ENSMUST00000023068 Rpgrip1Q9EPQ2 1331 aa11.84□□□□□ -0.51
Smc1b-201ENSMUST00000023068 TnnQ80Z71 1560 aa11.83□□□□□ -0.52
Smc1b-201ENSMUST00000023068 Mier1Q5UAK0 511 aa11.82□□□□□ -0.52
Smc1b-201ENSMUST00000023068 Camsap1A2AHC3 1581 aa11.81□□□□□ -0.52
Smc1b-201ENSMUST00000023068 Clip1Q922J3 1391 aa11.81□□□□□ -0.52
Smc1b-201ENSMUST00000023068 Lmod2Q3UHZ5 550 aa11.75□□□□□ -0.53
Smc1b-201ENSMUST00000023068 Baz1bQ9Z277 1479 aa11.74□□□□□ -0.53
Smc1b-201ENSMUST00000023068 Arhgap35Q91YM2 1499 aa11.74□□□□□ -0.53
Smc1b-201ENSMUST00000023068 LrpprcQ6PB66 1392 aaKnown RBP11.74□□□□□ -0.53
Smc1b-201ENSMUST00000023068 Grin2bQ01097 1482 aa11.74□□□□□ -0.53
Smc1b-201ENSMUST00000023068 Fam135aQ6NS59 1506 aa11.73□□□□□ -0.53
Smc1b-201ENSMUST00000023068 Shroom4Q1W617 1475 aa11.72□□□□□ -0.53
Smc1b-201ENSMUST00000023068 Dhx29Q6PGC1 1365 aaKnown RBP11.71□□□□□ -0.53
Smc1b-201ENSMUST00000023068 Setd5Q5XJV7 1441 aa11.7□□□□□ -0.54
Smc1b-201ENSMUST00000023068 Duox2A2AQ99 1517 aa11.67□□□□□ -0.54
Smc1b-201ENSMUST00000023068 Rad54l2Q99NG0 1466 aa11.66□□□□□ -0.54
Smc1b-201ENSMUST00000023068 NrkQ9R0G8 1455 aa11.65□□□□□ -0.54
Smc1b-201ENSMUST00000023068 PogzQ8BZH4 1409 aaKnown RBP11.64□□□□□ -0.55
Smc1b-201ENSMUST00000023068 Mrc2Q64449 1479 aa11.64□□□□□ -0.55
Smc1b-201ENSMUST00000023068 Eea1Q8BL66 1411 aa11.63□□□□□ -0.55
Smc1b-201ENSMUST00000023068 Mroh2bQ7M6Y6 1581 aa11.6□□□□□ -0.55
Smc1b-201ENSMUST00000023068 Kif21aQ9QXL2 1672 aa11.6□□□□□ -0.55
Smc1b-201ENSMUST00000023068 Eif4g1Q6NZJ6 1600 aaKnown RBP11.59□□□□□ -0.55
Smc1b-201ENSMUST00000023068 Arap1Q4LDD4 1452 aa11.59□□□□□ -0.55
Smc1b-201ENSMUST00000023068 Samd9lQ69Z37 1561 aa11.58□□□□□ -0.56
Smc1b-201ENSMUST00000023068 Efcab5A0JP43 1406 aa11.58□□□□□ -0.56
Smc1b-201ENSMUST00000023068 Fam50aQ9WV03 339 aaKnown RBP11.57□□□□□ -0.56
Smc1b-201ENSMUST00000023068 BlmO88700 1416 aa11.57□□□□□ -0.56
Smc1b-201ENSMUST00000023068 Plb1Q3TTY0 1478 aa11.56□□□□□ -0.56
Smc1b-201ENSMUST00000023068 Ppargc1bQ8VHJ7 1014 aa11.55□□□□□ -0.56
Smc1b-201ENSMUST00000023068 Eid3Q3V124 375 aa11.54□□□□□ -0.56
Smc1b-201ENSMUST00000023068 Crocc2F6XLV1 1638 aa11.53□□□□□ -0.56
Smc1b-201ENSMUST00000023068 Urb2E9Q7L1 1524 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 100.7 ms