RNA–Protein interactions for RNA: ENSMUST00000022871.6

Sdc2-201, Transcript of Syndecan-2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc2, Length 3,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2-201ENSMUST00000022871 NischQ80TM9 1593 aa19.4■□□□□ 0.7
Sdc2-201ENSMUST00000022871 Rhox8Q6VSS7 320 aa18.75■□□□□ 0.59
Sdc2-201ENSMUST00000022871 Abcc9P70170 1546 aa18.48■□□□□ 0.55
Sdc2-201ENSMUST00000022871 Gm35339A0A140LHH9 1649 aa18.48■□□□□ 0.55
Sdc2-201ENSMUST00000022871 Abcc8B2RUS7 1588 aa18.4■□□□□ 0.54
Sdc2-201ENSMUST00000022871 Ccdc136Q3TVA9 1136 aa17.36■□□□□ 0.37
Sdc2-201ENSMUST00000022871 ScribQ80U72 1612 aa17.34■□□□□ 0.37
Sdc2-201ENSMUST00000022871 NacadQ5SWP3 1504 aa17.16■□□□□ 0.34
Sdc2-201ENSMUST00000022871 Kdm5dQ62240 1548 aa17.15■□□□□ 0.34
Sdc2-201ENSMUST00000022871 Zcchc6Q5BLK4 1491 aaKnown RBP17.08■□□□□ 0.33
Sdc2-201ENSMUST00000022871 Rb1cc1Q9ESK9 1588 aa16.93■□□□□ 0.3
Sdc2-201ENSMUST00000022871 Esf1Q3V1V3 845 aaKnown RBP16.9■□□□□ 0.3
Sdc2-201ENSMUST00000022871 Sycp2Q9CUU3 1500 aa16.72■□□□□ 0.27
Sdc2-201ENSMUST00000022871 Cngb1E1AZ71 1325 aa16.7■□□□□ 0.26
Sdc2-201ENSMUST00000022871 Dcaf1Q80TR8 1506 aa16.7■□□□□ 0.26
Sdc2-201ENSMUST00000022871 Trim41Q5NCC3 630 aa16.67■□□□□ 0.26
Sdc2-201ENSMUST00000022871 Baz1aO88379 1555 aa16.59■□□□□ 0.25
Sdc2-201ENSMUST00000022871 Il27Q8K3I6 234 aa16.37■□□□□ 0.21
Sdc2-201ENSMUST00000022871 BicraF8VPZ9 1578 aa16.29■□□□□ 0.2
Sdc2-201ENSMUST00000022871 Cecr2E9Q2Z1 1453 aa16.26■□□□□ 0.19
Sdc2-201ENSMUST00000022871 Gab3Q8BSM5 595 aa16.25■□□□□ 0.19
Sdc2-201ENSMUST00000022871 Dnajc5bQ9CQ94 199 aa16.23■□□□□ 0.19
Sdc2-201ENSMUST00000022871 Ubl4bQ9CQ84 188 aa16.22■□□□□ 0.19
Sdc2-201ENSMUST00000022871 Pds5bQ4VA53 1446 aaKnown RBP16.19■□□□□ 0.18
Sdc2-201ENSMUST00000022871 Crybg2B7ZCC2 1516 aa16.15■□□□□ 0.18
Sdc2-201ENSMUST00000022871 Brd4Q9ESU6 1400 aaKnown RBP16.14■□□□□ 0.17
Sdc2-201ENSMUST00000022871 Zeb1Q64318 1117 aa16.05■□□□□ 0.16
Sdc2-201ENSMUST00000022871 Ercc6F8VPZ5 1481 aa16.02■□□□□ 0.16
Sdc2-201ENSMUST00000022871 Atad2bE9Q166 1460 aaKnown RBP16.02■□□□□ 0.15
Sdc2-201ENSMUST00000022871 Smarca2Q6DIC0 1577 aa16■□□□□ 0.15
Sdc2-201ENSMUST00000022871 Npm2Q80W85 207 aa15.99■□□□□ 0.15
Sdc2-201ENSMUST00000022871 Npm1Q61937 292 aaKnown RBP15.98■□□□□ 0.15
Sdc2-201ENSMUST00000022871 Ccdc180J3QNE4 1664 aa15.96■□□□□ 0.15
Sdc2-201ENSMUST00000022871 Myt1lP97500 1187 aa15.93■□□□□ 0.14
Sdc2-201ENSMUST00000022871 Rtl1Q7M732 1744 aa15.92■□□□□ 0.14
Sdc2-201ENSMUST00000022871 Smarca4Q3TKT4 1613 aaKnown RBP15.88■□□□□ 0.13
Sdc2-201ENSMUST00000022871 Chic1Q8CBW7 227 aa15.88■□□□□ 0.13
Sdc2-201ENSMUST00000022871 CftrP26361 1476 aa15.87■□□□□ 0.13
Sdc2-201ENSMUST00000022871 Kif15Q6P9L6 1387 aa15.83■□□□□ 0.12
Sdc2-201ENSMUST00000022871 Iqgap2Q3UQ44 1575 aa15.81■□□□□ 0.12
Sdc2-201ENSMUST00000022871 Synj1Q8CHC4 1574 aa15.8■□□□□ 0.12
Sdc2-201ENSMUST00000022871 DiexfQ8BTT6 772 aaKnown RBP15.78■□□□□ 0.12
Sdc2-201ENSMUST00000022871 Ehmt2Q9Z148 1263 aaKnown RBP15.78■□□□□ 0.12
Sdc2-201ENSMUST00000022871 Phldb1Q6PDH0 1371 aaKnown RBP15.74■□□□□ 0.11
Sdc2-201ENSMUST00000022871 Rsf1E9PWW9 1441 aaKnown RBP15.71■□□□□ 0.11
Sdc2-201ENSMUST00000022871 Pcgf6Q99NA9 353 aa15.68■□□□□ 0.1
Sdc2-201ENSMUST00000022871 HrcG5E8J6 738 aa15.67■□□□□ 0.1
Sdc2-201ENSMUST00000022871 Golga3P55937 1487 aa15.66■□□□□ 0.1
Sdc2-201ENSMUST00000022871 Frmpd1A2AKB4 1549 aa15.66■□□□□ 0.1
Sdc2-201ENSMUST00000022871 Rpgrip1Q9EPQ2 1331 aa15.58■□□□□ 0.09
Sdc2-201ENSMUST00000022871 Cux2P70298 1426 aa15.58■□□□□ 0.08
Sdc2-201ENSMUST00000022871 Cc2d2aQ8CFW7 1633 aa15.56■□□□□ 0.08
Sdc2-201ENSMUST00000022871 Cttnbp2B9EJA2 1648 aa15.54■□□□□ 0.08
Sdc2-201ENSMUST00000022871 Ap3b1Q9Z1T1 1105 aa15.5■□□□□ 0.07
Sdc2-201ENSMUST00000022871 Wdr62Q3U3T8 1523 aa15.49■□□□□ 0.07
Sdc2-201ENSMUST00000022871 Ccdc88bQ4QRL3 1481 aa15.49■□□□□ 0.07
Sdc2-201ENSMUST00000022871 Cep164Q5DU05 1446 aa15.41■□□□□ 0.06
Sdc2-201ENSMUST00000022871 Ccdc18Q640L5 1455 aa15.41■□□□□ 0.06
Sdc2-201ENSMUST00000022871 Pelp1Q9DBD5 1123 aaKnown RBP15.4■□□□□ 0.06
Sdc2-201ENSMUST00000022871 Ifnlr1Q8CGK5 535 aa15.36■□□□□ 0.05
Sdc2-201ENSMUST00000022871 Thoc2B1AZI6 1594 aaKnown RBP15.35■□□□□ 0.05
Sdc2-201ENSMUST00000022871 Fkbp15Q6P9Q6 1216 aaKnown RBP15.32■□□□□ 0.04
Sdc2-201ENSMUST00000022871 CenpbP27790 599 aa15.3■□□□□ 0.04
Sdc2-201ENSMUST00000022871 Mrc2Q64449 1479 aa15.29■□□□□ 0.04
Sdc2-201ENSMUST00000022871 Fmn1Q05860 1466 aa15.29■□□□□ 0.04
Sdc2-201ENSMUST00000022871 Dhx29Q6PGC1 1365 aaKnown RBP15.27■□□□□ 0.03
Sdc2-201ENSMUST00000022871 LrpprcQ6PB66 1392 aaKnown RBP15.25■□□□□ 0.03
Sdc2-201ENSMUST00000022871 Bcl11aQ9QYE3 773 aa15.25■□□□□ 0.03
Sdc2-201ENSMUST00000022871 Myt1Q8CFC2 1127 aa15.24■□□□□ 0.03
Sdc2-201ENSMUST00000022871 Amer1Q7TS75 1132 aa15.23■□□□□ 0.03
Sdc2-201ENSMUST00000022871 Lmod2Q3UHZ5 550 aa15.21■□□□□ 0.03
Sdc2-201ENSMUST00000022871 UbtfP25976 765 aaKnown RBP15.18■□□□□ 0.02
Sdc2-201ENSMUST00000022871 Fam135aQ6NS59 1506 aa15.17■□□□□ 0.02
Sdc2-201ENSMUST00000022871 Arhgap27A2AB59 869 aa15.13■□□□□ 0.01
Sdc2-201ENSMUST00000022871 Plekhg3Q4VAC9 1341 aa15.13■□□□□ 0.01
Sdc2-201ENSMUST00000022871 Urb2E9Q7L1 1524 aaKnown RBP15.08■□□□□ 0
Sdc2-201ENSMUST00000022871 Las1lA2BE28 776 aaKnown RBP15.08■□□□□ 0
Sdc2-201ENSMUST00000022871 Ube2uB1AUC4 352 aa15.04■□□□□ -0
Sdc2-201ENSMUST00000022871 PrkcshO08795 521 aa15.04■□□□□ -0
Sdc2-201ENSMUST00000022871 Plb1Q3TTY0 1478 aa15.04■□□□□ -0
Sdc2-201ENSMUST00000022871 Rad54l2Q99NG0 1466 aa15.01□□□□□ -0.01
Sdc2-201ENSMUST00000022871 Lamc3Q9R0B6 1581 aa15□□□□□ -0.01
Sdc2-201ENSMUST00000022871 Duox2A2AQ99 1517 aa15□□□□□ -0.01
Sdc2-201ENSMUST00000022871 Baz1bQ9Z277 1479 aa15□□□□□ -0.01
Sdc2-201ENSMUST00000022871 Top2bQ64511 1612 aa14.99□□□□□ -0.01
Sdc2-201ENSMUST00000022871 Ttbk1Q6PCN3 1308 aa14.98□□□□□ -0.01
Sdc2-201ENSMUST00000022871 PtprkP35822 1457 aa14.98□□□□□ -0.01
Sdc2-201ENSMUST00000022871 Clip1Q922J3 1391 aa14.97□□□□□ -0.01
Sdc2-201ENSMUST00000022871 PogzQ8BZH4 1409 aaKnown RBP14.97□□□□□ -0.01
Sdc2-201ENSMUST00000022871 Rapgef2Q8CHG7 1496 aa14.97□□□□□ -0.01
Sdc2-201ENSMUST00000022871 AknaQ80VW7 1404 aa14.96□□□□□ -0.01
Sdc2-201ENSMUST00000022871 Plppr3Q7TPB0 716 aa14.96□□□□□ -0.02
Sdc2-201ENSMUST00000022871 Camsap1A2AHC3 1581 aa14.93□□□□□ -0.02
Sdc2-201ENSMUST00000022871 Setd5Q5XJV7 1441 aa14.92□□□□□ -0.02
Sdc2-201ENSMUST00000022871 Grin2bQ01097 1482 aa14.91□□□□□ -0.02
Sdc2-201ENSMUST00000022871 Cep162Q6ZQ06 1403 aa14.91□□□□□ -0.02
Sdc2-201ENSMUST00000022871 Neurod1Q60867 357 aa14.89□□□□□ -0.03
Sdc2-201ENSMUST00000022871 Fam50aQ9WV03 339 aaKnown RBP14.89□□□□□ -0.03
Sdc2-201ENSMUST00000022871 Efcab5A0JP43 1406 aa14.89□□□□□ -0.03
Sdc2-201ENSMUST00000022871 Unc13aQ4KUS2 1712 aa14.88□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 142.1 ms